Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194334999

Identifier: 194334999

GI number: 194334999

Start: 2388016

End: 2388738

Strand: Reverse

Name: 194334999

Synonym: Paes_2210

Alternate gene names: NA

Gene position: 2388738-2388016 (Counterclockwise)

Preceding gene: 194335000

Following gene: 194334998

Centisome position: 95.06

GC content: 53.25

Gene sequence:

>723_bases
ATGGCTACACAACTCGCTGTTTGCCGCAGGATATGGTTTTTCTGCTGTCTGCTTTTGCTTCTCATGGTCGCGTCTCCCAT
CAGGGGCCTTGATGCAGTAGACCGTTGGGAGGGGGGCTATGTCGGCAGTAAAACGGAAGGTGACGCTACTACTCCTGTCT
GGAACTTTATCAGGCATTTTGACTATAACCAGTACTACTGGGCTGAAACATTTCAGTTTGACTCATTCAACAACGAGCGG
GTCGATGCAATGGACTTTTCCTACTTTGTCGGTCACGGCAGCCCCTGGAATATCAAATGCCAGTCAACCTGGATGGATCT
TCGTTCGGCGGGCAGTTTTGCGGCTGAAGGCTGGGGGGACACCAACTCGGAATTCGTGACGCTTCATGCCTGTAAGGTGG
TGGCCAGTCCTCTTGAGGTCGGCGACTGGTACAGCGCCTGGACCAGGGAGAACGGTCTGTTTGATGGTGTGCATCAGGTC
TGCGGTTTCCGGACCAACGCGTCCCAGTCCTGCGATCAGGATATTTCCAACTATTTCGGCATCAGAATGAAAGCGGGCGG
TGCTGTCTGGCAGTCCTGGTTCGATGCTATCTGGATGTATGGCAATGGCTCCGAGCGAGGTGCTGCTGTGATGTATCCGG
CATGCGATGGCGACTCCTACGCGAGTTACAGCCTTGATCCTCCGGCTGATCACTCCTGGTTGAGAATCTGGTATCAATAT
TAA

Upstream 100 bases:

>100_bases
TCTTTTTGTCGTGTTGTTGTTCTGCCCGGCAATCCAGAGGCAGAATCACGTCAATGCTGACAGGTTCTCGTAACGGCTAC
AAGAAAAATGGAAAGGTATC

Downstream 100 bases:

>100_bases
CTGCGGACCGGACACCTATGATCAAAAGAGTACTCCCCATCGTTGCGCTTGTGGCCGTGATGCTTGCCGTGATTCCGGGA
TCGATGTCCGATGCCCTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MATQLAVCRRIWFFCCLLLLLMVASPIRGLDAVDRWEGGYVGSKTEGDATTPVWNFIRHFDYNQYYWAETFQFDSFNNER
VDAMDFSYFVGHGSPWNIKCQSTWMDLRSAGSFAAEGWGDTNSEFVTLHACKVVASPLEVGDWYSAWTRENGLFDGVHQV
CGFRTNASQSCDQDISNYFGIRMKAGGAVWQSWFDAIWMYGNGSERGAAVMYPACDGDSYASYSLDPPADHSWLRIWYQY

Sequences:

>Translated_240_residues
MATQLAVCRRIWFFCCLLLLLMVASPIRGLDAVDRWEGGYVGSKTEGDATTPVWNFIRHFDYNQYYWAETFQFDSFNNER
VDAMDFSYFVGHGSPWNIKCQSTWMDLRSAGSFAAEGWGDTNSEFVTLHACKVVASPLEVGDWYSAWTRENGLFDGVHQV
CGFRTNASQSCDQDISNYFGIRMKAGGAVWQSWFDAIWMYGNGSERGAAVMYPACDGDSYASYSLDPPADHSWLRIWYQY
>Mature_239_residues
ATQLAVCRRIWFFCCLLLLLMVASPIRGLDAVDRWEGGYVGSKTEGDATTPVWNFIRHFDYNQYYWAETFQFDSFNNERV
DAMDFSYFVGHGSPWNIKCQSTWMDLRSAGSFAAEGWGDTNSEFVTLHACKVVASPLEVGDWYSAWTRENGLFDGVHQVC
GFRTNASQSCDQDISNYFGIRMKAGGAVWQSWFDAIWMYGNGSERGAAVMYPACDGDSYASYSLDPPADHSWLRIWYQY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27356; Mature: 27224

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQLAVCRRIWFFCCLLLLLMVASPIRGLDAVDRWEGGYVGSKTEGDATTPVWNFIRHF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHC
DYNQYYWAETFQFDSFNNERVDAMDFSYFVGHGSPWNIKCQSTWMDLRSAGSFAAEGWGD
CCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCCC
TNSEFVTLHACKVVASPLEVGDWYSAWTRENGLFDGVHQVCGFRTNASQSCDQDISNYFG
CCCCEEEEEEHHHHHCCHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCC
IRMKAGGAVWQSWFDAIWMYGNGSERGAAVMYPACDGDSYASYSLDPPADHSWLRIWYQY
EEEECCHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
ATQLAVCRRIWFFCCLLLLLMVASPIRGLDAVDRWEGGYVGSKTEGDATTPVWNFIRHF
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHC
DYNQYYWAETFQFDSFNNERVDAMDFSYFVGHGSPWNIKCQSTWMDLRSAGSFAAEGWGD
CCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCCC
TNSEFVTLHACKVVASPLEVGDWYSAWTRENGLFDGVHQVCGFRTNASQSCDQDISNYFG
CCCCEEEEEEHHHHHCCHHCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCC
IRMKAGGAVWQSWFDAIWMYGNGSERGAAVMYPACDGDSYASYSLDPPADHSWLRIWYQY
EEEECCHHHHHHHHHHEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA