| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334971
Identifier: 194334971
GI number: 194334971
Start: 2355209
End: 2356414
Strand: Reverse
Name: 194334971
Synonym: Paes_2182
Alternate gene names: NA
Gene position: 2356414-2355209 (Counterclockwise)
Preceding gene: 194334973
Following gene: 194334970
Centisome position: 93.77
GC content: 52.32
Gene sequence:
>1206_bases ATGACCGCTGAAGAATTTTGTCAGTTGCTGACCCCCGAATCGATGGCCCTTGTAGAGCGCCATTGCGGCGATGATCCCGC GGCATTCGCCCTCTCCTTTCATGGCAGAAGGGATCTTCCTGTGCGCGCTATTGCCGAGCAGATAGCCTGTCGGCGAAAAG CAGCGAGGAAACTTCCTTCGCTTTCGCAGCACCCTTTGATCTATACCACGCTTTCGCTGGAACAGGCTTCCGGAGAAAAA GCCGCCCGCTATAAGGCCGGGCTGATGGGCGGGGATCGGGTGATTGATCTCAGCGGCGGTCTGGGGATCGATGCGATTTT TCTTGCATCGCGTTTTCGGGAGGTCATGTACTGCGAACGCGATGCAATGCTGGCCGCTATTGCAGAAACTAATTTCAGAA CATTAGGCATAACTAATATTTCTGTTGTGACAGGCGACAGCCTTTCACTGCTGCAGTCCGTTGCAGATGATGGTTTTGAC TGGATTTATGTCGATCCTGCCCGAAGAGAGCATAGCGGGCGATCTGCCGGACTGAGAAGCGCTAGCCCGGATGTGACGCA GTTGCATGATCTATTGCTGCGCAAGGCCCGGAAGTTTTGTGTCAAGGCGTCCCCGGCTATCGAGATCAGCGCTCTTGGCC GTGAGCTTCGCTCTCTTGTATCGGTAACAGTACTCTCGGTCGATCGGGAATGTAAAGAGGTGCTTCTTTTTTGTGATCGG GAGGGTTCCGGCGTTAGGCTGCCGTCTGTTCGATCGGTTTGTCTGGGCTTGAGCGGTGAATTTGTTCTGAATGAGACGGG CGAAGATTCCTCCGTCAGGCCTGTTGCCGTTGACCCCGGACGATACCTCTTTGAACCCGATCCTGCAATCATCAAGGCCA GACAGAGTCATCTGCTTGCATTGCACTATGATTTGCAGTTTCTCAATTCATCGGTTGATTATCTTACCGGCTCAGTACCT GTTGAGGGTTTTCCCGGCAGGGTCTTCTCCATCATCGGCAGCTTTGCCTACAAGCCGGCAGCGTTGAAGGCTTTGTTGAA TAAGCGGGGAATAACTGCCGCCAGCATTCAGAGGCGTGATTTTCCTCTCTCTCCCGATGTGATCAGAAAAAAGTTTCGGT TGAAAGAGAGCGATCATACGTTTCTGTTTTTTACCAGGGACCGTTCCGGAAACCTTTTTTGTCTTTGTTGTGAGCGTTAT GCATAA
Upstream 100 bases:
>100_bases TCTTTTGTATAATTAATGTAGGAAAGCCCGGCTTGATTTCTCAACAGGATCTGCCTGGAGCCCTTTCTGCTGCATGAACC CATAAGGTATTGTAGGTTGT
Downstream 100 bases:
>100_bases AATGAAGAACTGAGCGGTAACATGGGGACTTTTTTGTTACTGGTCACCCTTCGAATTCCGGGTTCCGGTGCATGTTTTTT TCGGTGAGACAATCGTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTAEEFCQLLTPESMALVERHCGDDPAAFALSFHGRRDLPVRAIAEQIACRRKAARKLPSLSQHPLIYTTLSLEQASGEK AARYKAGLMGGDRVIDLSGGLGIDAIFLASRFREVMYCERDAMLAAIAETNFRTLGITNISVVTGDSLSLLQSVADDGFD WIYVDPARREHSGRSAGLRSASPDVTQLHDLLLRKARKFCVKASPAIEISALGRELRSLVSVTVLSVDRECKEVLLFCDR EGSGVRLPSVRSVCLGLSGEFVLNETGEDSSVRPVAVDPGRYLFEPDPAIIKARQSHLLALHYDLQFLNSSVDYLTGSVP VEGFPGRVFSIIGSFAYKPAALKALLNKRGITAASIQRRDFPLSPDVIRKKFRLKESDHTFLFFTRDRSGNLFCLCCERY A
Sequences:
>Translated_401_residues MTAEEFCQLLTPESMALVERHCGDDPAAFALSFHGRRDLPVRAIAEQIACRRKAARKLPSLSQHPLIYTTLSLEQASGEK AARYKAGLMGGDRVIDLSGGLGIDAIFLASRFREVMYCERDAMLAAIAETNFRTLGITNISVVTGDSLSLLQSVADDGFD WIYVDPARREHSGRSAGLRSASPDVTQLHDLLLRKARKFCVKASPAIEISALGRELRSLVSVTVLSVDRECKEVLLFCDR EGSGVRLPSVRSVCLGLSGEFVLNETGEDSSVRPVAVDPGRYLFEPDPAIIKARQSHLLALHYDLQFLNSSVDYLTGSVP VEGFPGRVFSIIGSFAYKPAALKALLNKRGITAASIQRRDFPLSPDVIRKKFRLKESDHTFLFFTRDRSGNLFCLCCERY A >Mature_400_residues TAEEFCQLLTPESMALVERHCGDDPAAFALSFHGRRDLPVRAIAEQIACRRKAARKLPSLSQHPLIYTTLSLEQASGEKA ARYKAGLMGGDRVIDLSGGLGIDAIFLASRFREVMYCERDAMLAAIAETNFRTLGITNISVVTGDSLSLLQSVADDGFDW IYVDPARREHSGRSAGLRSASPDVTQLHDLLLRKARKFCVKASPAIEISALGRELRSLVSVTVLSVDRECKEVLLFCDRE GSGVRLPSVRSVCLGLSGEFVLNETGEDSSVRPVAVDPGRYLFEPDPAIIKARQSHLLALHYDLQFLNSSVDYLTGSVPV EGFPGRVFSIIGSFAYKPAALKALLNKRGITAASIQRRDFPLSPDVIRKKFRLKESDHTFLFFTRDRSGNLFCLCCERYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44208; Mature: 44077
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAEEFCQLLTPESMALVERHCGDDPAAFALSFHGRRDLPVRAIAEQIACRRKAARKLPS CCHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC LSQHPLIYTTLSLEQASGEKAARYKAGLMGGDRVIDLSGGLGIDAIFLASRFREVMYCER CCCCCEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH DAMLAAIAETNFRTLGITNISVVTGDSLSLLQSVADDGFDWIYVDPARREHSGRSAGLRS HHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCC ASPDVTQLHDLLLRKARKFCVKASPAIEISALGRELRSLVSVTVLSVDRECKEVLLFCDR CCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC EGSGVRLPSVRSVCLGLSGEFVLNETGEDSSVRPVAVDPGRYLFEPDPAIIKARQSHLLA CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCEEECCCHHHHHHCCCCEEE LHYDLQFLNSSVDYLTGSVPVEGFPGRVFSIIGSFAYKPAALKALLNKRGITAASIQRRD EEEHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCC FPLSPDVIRKKFRLKESDHTFLFFTRDRSGNLFCLCCERYA CCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCC >Mature Secondary Structure TAEEFCQLLTPESMALVERHCGDDPAAFALSFHGRRDLPVRAIAEQIACRRKAARKLPS CHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC LSQHPLIYTTLSLEQASGEKAARYKAGLMGGDRVIDLSGGLGIDAIFLASRFREVMYCER CCCCCEEEEEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH DAMLAAIAETNFRTLGITNISVVTGDSLSLLQSVADDGFDWIYVDPARREHSGRSAGLRS HHHHHHHHHCCCEEEEEEEEEEEECCHHHHHHHHHCCCCCEEEECCHHHCCCCCCCCCCC ASPDVTQLHDLLLRKARKFCVKASPAIEISALGRELRSLVSVTVLSVDRECKEVLLFCDR CCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC EGSGVRLPSVRSVCLGLSGEFVLNETGEDSSVRPVAVDPGRYLFEPDPAIIKARQSHLLA CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCEEECCCHHHHHHCCCCEEE LHYDLQFLNSSVDYLTGSVPVEGFPGRVFSIIGSFAYKPAALKALLNKRGITAASIQRRD EEEHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCCCC FPLSPDVIRKKFRLKESDHTFLFFTRDRSGNLFCLCCERYA CCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA