| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334784
Identifier: 194334784
GI number: 194334784
Start: 2179331
End: 2180638
Strand: Reverse
Name: 194334784
Synonym: Paes_1985
Alternate gene names: NA
Gene position: 2180638-2179331 (Counterclockwise)
Preceding gene: 194334792
Following gene: 194334783
Centisome position: 86.78
GC content: 41.51
Gene sequence:
>1308_bases ATGATAACGCTGATGGCGGGAGTGAGCCAGGCAGGAGAAAAGACTGATGATCTTGTGATGGTAAACCTTCAGTCGACATT GACTGAATTGAATGATTTTCGTCCTGGATATATTTATCTGGTGGTTGCTAATAAGTCTGATACTCTGCTCAATGTCGACA GGATTGAAATCGCTGAATATCCTGATTTTATTGACGTTAAAAAGTCATCTCTTGACTCCGTTGTTGTATCCAGGGAAAAA AAGAGTCTTTTCTATCCTGATAAAAAAACTATCAATGCCGGTGAATCTGAGGTTTATGAGGTGTTTATCACGGCGTCTGA TCAGGTTAAGCCTGGAAAACATCTTTTGTTGTTCAATGTGTTCTACAATGGTTGGGTGTCAGCTAAATCTGAGAATGCTA GTATAGCAGAAAAATCTCCAAGAGATGCTCTTTCTCCAAAAGTAAGTAAAACAGGTAGTCTTACCCTGAGTCATGAACTT GATGTCAAGGTTTTTGGCGAAAATGAGATACTTGGTGCATTATCAAATGCTGTCACATTTCTCATGATGCCCGGTTTCAT CATGGTCATTGTATTTGCCATGGTCTGGAAAATTTCAGCTCCAGTTTCATATCAAGAAAAGCTGCCAGCATGGTTTAAAG AGACAAAAGTTGCTGATCTTCAATTCTGGGTCATTGCGATTACAATGTCGCTCATCATGGCCAGATGGCTTTACCCCATT CTGACTCAGCTGTTTACATCCGGTAGGCGAAATTATCTCTATGGGTATGGATTTTATGATATTGTGATGATGTGGGGATT TTCTGTGCTTGTTGGAGGTTTTTCCGGTCTGATTGCCGGATGGGTGGTCAGCCTCTATCGAAAAACAAAGTATAGCAAAG CTATTCATGGGGATGAGAATCCATTAGAGCTTCTGCAAAAAGCTGTTGTTCTGGGGGTTAACCAGTCATGGCTGAAGAAA ATATCAGTCAAGAAGACTGGGAAATCAGGATATATCGTCGAGCAGGATGCTGTCGACAAAGATTCTTTATGGGTCATACC ACGAATACAGGTTACATGGCAGGCGGGTGCGGATGAACTGAATGAACGATTTGAACAGGAGATATATGATCCAAAAACAA AGCTTGCAGTTCTTCTGGAAACGCTTGCCGAAGGAGAGCGACAAAAGCAGGCAGGAAAAGGATTGGAGGATATCGATTGG GAAAAAAACACTCGGTTTATAGAGCGGCCATTGGTGGTCAAAAAAGCAGACTTCGATTCATGCCATGATACCGAGAATAT TTTTTCTTGCGATACGTCGAAGCAATAA
Upstream 100 bases:
>100_bases TAAGCTAATCATCCATGGGGATCAGTGCACTTTTTGTCAATACATTTCCACTAAGATGATAGAGCAAAGCAGTATGAAGA GTTTTTTGCTTTTGTGCCTG
Downstream 100 bases:
>100_bases AAAAGCGAATCCCTTAGGATTCGCATATCGTTCAGGGCTTCCCAAGTAGGGATTTGTTGATCTTGCGACCAAGCGCGCCC TCAAAACGAAGTCAGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MITLMAGVSQAGEKTDDLVMVNLQSTLTELNDFRPGYIYLVVANKSDTLLNVDRIEIAEYPDFIDVKKSSLDSVVVSREK KSLFYPDKKTINAGESEVYEVFITASDQVKPGKHLLLFNVFYNGWVSAKSENASIAEKSPRDALSPKVSKTGSLTLSHEL DVKVFGENEILGALSNAVTFLMMPGFIMVIVFAMVWKISAPVSYQEKLPAWFKETKVADLQFWVIAITMSLIMARWLYPI LTQLFTSGRRNYLYGYGFYDIVMMWGFSVLVGGFSGLIAGWVVSLYRKTKYSKAIHGDENPLELLQKAVVLGVNQSWLKK ISVKKTGKSGYIVEQDAVDKDSLWVIPRIQVTWQAGADELNERFEQEIYDPKTKLAVLLETLAEGERQKQAGKGLEDIDW EKNTRFIERPLVVKKADFDSCHDTENIFSCDTSKQ
Sequences:
>Translated_435_residues MITLMAGVSQAGEKTDDLVMVNLQSTLTELNDFRPGYIYLVVANKSDTLLNVDRIEIAEYPDFIDVKKSSLDSVVVSREK KSLFYPDKKTINAGESEVYEVFITASDQVKPGKHLLLFNVFYNGWVSAKSENASIAEKSPRDALSPKVSKTGSLTLSHEL DVKVFGENEILGALSNAVTFLMMPGFIMVIVFAMVWKISAPVSYQEKLPAWFKETKVADLQFWVIAITMSLIMARWLYPI LTQLFTSGRRNYLYGYGFYDIVMMWGFSVLVGGFSGLIAGWVVSLYRKTKYSKAIHGDENPLELLQKAVVLGVNQSWLKK ISVKKTGKSGYIVEQDAVDKDSLWVIPRIQVTWQAGADELNERFEQEIYDPKTKLAVLLETLAEGERQKQAGKGLEDIDW EKNTRFIERPLVVKKADFDSCHDTENIFSCDTSKQ >Mature_435_residues MITLMAGVSQAGEKTDDLVMVNLQSTLTELNDFRPGYIYLVVANKSDTLLNVDRIEIAEYPDFIDVKKSSLDSVVVSREK KSLFYPDKKTINAGESEVYEVFITASDQVKPGKHLLLFNVFYNGWVSAKSENASIAEKSPRDALSPKVSKTGSLTLSHEL DVKVFGENEILGALSNAVTFLMMPGFIMVIVFAMVWKISAPVSYQEKLPAWFKETKVADLQFWVIAITMSLIMARWLYPI LTQLFTSGRRNYLYGYGFYDIVMMWGFSVLVGGFSGLIAGWVVSLYRKTKYSKAIHGDENPLELLQKAVVLGVNQSWLKK ISVKKTGKSGYIVEQDAVDKDSLWVIPRIQVTWQAGADELNERFEQEIYDPKTKLAVLLETLAEGERQKQAGKGLEDIDW EKNTRFIERPLVVKKADFDSCHDTENIFSCDTSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49080; Mature: 49080
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLMAGVSQAGEKTDDLVMVNLQSTLTELNDFRPGYIYLVVANKSDTLLNVDRIEIAEY CEEEEECCHHCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCEECCCC PDFIDVKKSSLDSVVVSREKKSLFYPDKKTINAGESEVYEVFITASDQVKPGKHLLLFNV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEE FYNGWVSAKSENASIAEKSPRDALSPKVSKTGSLTLSHELDVKVFGENEILGALSNAVTF ECCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECEEEEECCCHHHHHHHHHHHH LMMPGFIMVIVFAMVWKISAPVSYQEKLPAWFKETKVADLQFWVIAITMSLIMARWLYPI HHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LTQLFTSGRRNYLYGYGFYDIVMMWGFSVLVGGFSGLIAGWVVSLYRKTKYSKAIHGDEN HHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLELLQKAVVLGVNQSWLKKISVKKTGKSGYIVEQDAVDKDSLWVIPRIQVTWQAGADEL HHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEEECCCCCCCCEEEEEEEEEEECCCHHHH NERFEQEIYDPKTKLAVLLETLAEGERQKQAGKGLEDIDWEKNTRFIERPLVVKKADFDS HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECCCCC CHDTENIFSCDTSKQ CCCCCCCCCCCCCCC >Mature Secondary Structure MITLMAGVSQAGEKTDDLVMVNLQSTLTELNDFRPGYIYLVVANKSDTLLNVDRIEIAEY CEEEEECCHHCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCEECCCC PDFIDVKKSSLDSVVVSREKKSLFYPDKKTINAGESEVYEVFITASDQVKPGKHLLLFNV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEE FYNGWVSAKSENASIAEKSPRDALSPKVSKTGSLTLSHELDVKVFGENEILGALSNAVTF ECCCEECCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECEEEEECCCHHHHHHHHHHHH LMMPGFIMVIVFAMVWKISAPVSYQEKLPAWFKETKVADLQFWVIAITMSLIMARWLYPI HHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LTQLFTSGRRNYLYGYGFYDIVMMWGFSVLVGGFSGLIAGWVVSLYRKTKYSKAIHGDEN HHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLELLQKAVVLGVNQSWLKKISVKKTGKSGYIVEQDAVDKDSLWVIPRIQVTWQAGADEL HHHHHHHHHHHCCCHHHHHHHHHEECCCCCCEEECCCCCCCCEEEEEEEEEEECCCHHHH NERFEQEIYDPKTKLAVLLETLAEGERQKQAGKGLEDIDWEKNTRFIERPLVVKKADFDS HHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHHCCEEEEECCCCC CHDTENIFSCDTSKQ CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA