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The map label for this gene is hspC2 [H]

Identifier: 194334776

GI number: 194334776

Start: 2169423

End: 2169842

Strand: Reverse

Name: hspC2 [H]

Synonym: Paes_1977

Alternate gene names: 194334776

Gene position: 2169842-2169423 (Counterclockwise)

Preceding gene: 194334777

Following gene: 194334771

Centisome position: 86.35

GC content: 44.29

Gene sequence:

>420_bases
ATGGCTATCAAGTTGTATGGTCGGGATCCTCTCAAGATGTTCGAGAATGTGTTTAACGACACGGTGTCTCCCTTTGTTTC
ATCCATGGTTGCTCATTCGTTCAAGGTTGATGTCAGTGAGGATGAAATGGCTATCTACATCGATGCCGACATGCCGGGAA
TGAAGAAAGAGGATGTGAAAATCAGCATGGATGACGATGTTATGACGATTTGTGCCGAAAGGACACATGAGGAAGAGGAG
AAAAAGAAAGATTATCATCGCATTGAGCGTACCTACGGCAGTATGAGCAGGAGTTTCAGTGTGGGGGATAATGTGGATGT
TGATAAGATTGAGGCATCGTATGACAACGGGGTGTTGCACATTGTTGTGCCGAAAAAAGAGCCTGTAGAAAAGAAGAGCA
AGGATATATCGATCAAGTGA

Upstream 100 bases:

>100_bases
CGTTCTGATACCAAGAGGCTGATAGAGCAGCCTTTGCGGTATGCAGCAGTAGTTTGATGAGTTCTTAATGATCTGTAAAC
GAAAAGAAGGAGTGATTGTT

Downstream 100 bases:

>100_bases
CGGTGCTGTCGTTGCTCTGTGTACACACAAAAAACCCTCCGATCAGGAGGGTTTTTTGTGTTATGTCCGACGCTGATCAG
CAGTTGCGTACGGTTGATGA

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MAIKLYGRDPLKMFENVFNDTVSPFVSSMVAHSFKVDVSEDEMAIYIDADMPGMKKEDVKISMDDDVMTICAERTHEEEE
KKKDYHRIERTYGSMSRSFSVGDNVDVDKIEASYDNGVLHIVVPKKEPVEKKSKDISIK

Sequences:

>Translated_139_residues
MAIKLYGRDPLKMFENVFNDTVSPFVSSMVAHSFKVDVSEDEMAIYIDADMPGMKKEDVKISMDDDVMTICAERTHEEEE
KKKDYHRIERTYGSMSRSFSVGDNVDVDKIEASYDNGVLHIVVPKKEPVEKKSKDISIK
>Mature_138_residues
AIKLYGRDPLKMFENVFNDTVSPFVSSMVAHSFKVDVSEDEMAIYIDADMPGMKKEDVKISMDDDVMTICAERTHEEEEK
KKDYHRIERTYGSMSRSFSVGDNVDVDKIEASYDNGVLHIVVPKKEPVEKKSKDISIK

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 15902; Mature: 15771

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKLYGRDPLKMFENVFNDTVSPFVSSMVAHSFKVDVSEDEMAIYIDADMPGMKKEDVK
CEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCEE
ISMDDDVMTICAERTHEEEEKKKDYHRIERTYGSMSRSFSVGDNVDVDKIEASYDNGVLH
EEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCCEEE
IVVPKKEPVEKKSKDISIK
EEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIKLYGRDPLKMFENVFNDTVSPFVSSMVAHSFKVDVSEDEMAIYIDADMPGMKKEDVK
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCEE
ISMDDDVMTICAERTHEEEEKKKDYHRIERTYGSMSRSFSVGDNVDVDKIEASYDNGVLH
EEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEECCCCCEEE
IVVPKKEPVEKKSKDISIK
EEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA