Click here to switch to the map view.

The map label for this gene is 194334733

Identifier: 194334733

GI number: 194334733

Start: 2116511

End: 2117701

Strand: Reverse

Name: 194334733

Synonym: Paes_1934

Alternate gene names: NA

Gene position: 2117701-2116511 (Counterclockwise)

Preceding gene: 194334734

Following gene: 194334732

Centisome position: 84.27

GC content: 49.2

Gene sequence:

>1191_bases
ATGAAAAGCGATGTTGTTATCATTGGTGGTGGTATAAGCGGGCTGAGCCTTGCGTTTTACTGCGCCGGTGCAGGGCTTAA
AACCACCTTGCTGGAAAAGAACGATAGCGTGGGAGGGTCCTTTAACTCTCATCAGTTCTCCGAAAACGGATTGAAGTTCT
GGCTCGAAATGGGAGCCCATACCTGTTACAACTCCTACCAGAACCTTCTCGATATTGTTGAGGCGTGCAATATTTCCGAT
ACGATCATTCCTCGTGAGAAAGTGCCGTTCAGCCTGCTTATCGACAACAAGGTGACATCGCTTATGTCGGCGCTCAATAT
TTTTGAGGTGCTGAAATCAATACCGGCTATTTTTTCCCTGAAAAAAGATGGTCTGAGTGTTCGTGAGTATTATTCAAAGA
TCGTCGGCCAGGAGAACTACAACAAGGTGCTCAGTCACTTTTTCAGTGCGGTTCCTTCGCAGCCTACCGATGATTTTCCG
GCTGATATGATGTTCAAGTCCCGTCCTAAACGCAAGGAGGTGCTGAAGAACTATACCTTTACCAACGGTTTGCAGTCGGT
CGCCAGAGCGATTGCAAAAAGGCGCGGGATCAATGTTTTTACCTCTCAGGATGTGACCGGTGTGGAGATGCTCGATGGCC
GTTATGTCATCACAACAGCAGGAGGAGGGAGTTACTCAGCGGCAACATTGGCGCTCGCAACGCCATCAGCAGTGTCTTCG
CATCTTCTGCAGTCAATTGATCCGGCAATTGCAGGACATCTCGGGAAACTCAAGGCGGCATCAGTCGATTCTGTCGGGGT
CATCATCAGAAAGGGAGATCTGTCTGTCAAACCTGTTGCCGCTCTGATTTCGCCCAACGATATATTTTACTCGGCTGTCT
CGCGTGATGTCGTTCCCGATGAGCACTTCCGTGGTTTTGCGTTCCATTTCAAGCCGGGATTGAGCGAGGAGAAGAAGATG
AAGCGCATAACCGAAGCTCTTGGAGTCAGTACGGCTAAAATAGCCCATACCTGCCAGGTGACCAACGTCGTTCCGTCACT
TCGTGTCGGTCATAAAGAGTGGCTTGAGTCGATGGATCGTATGCTGTCAGGTAAAAACATTCTCCTGACAGGCAACTATT
TCGGAGGTATGGCGATTGAGGATTGTGTGTCGCGTTCCAGAAGCGAAAGCGAGCGTATGAAAAACATGTAG

Upstream 100 bases:

>100_bases
TCACTGCGGGGAGATGTGCACAGGAACTGATGGTGTTCTGCTGCGTTTTGACTACATTATAAAACAGGTCTCGTGAAAAA
ATCTCAAAACAAGTGCATAC

Downstream 100 bases:

>100_bases
GTGCGTTTTCTGAAGAGCATGTCAGCTTTGGCGGTATCGGTGATGTTATGATCGTGATTATGAATATATGGCAAGAGCTT
CGCAATCCGGAACTGGTACG

Product: amine oxidase

Products: NA

Alternate protein names: Amine Oxidase; Protoporphyrinogen Oxidase; Protoporphyrinogen Oxidase-Like Protein

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKSDVVIIGGGISGLSLAFYCAGAGLKTTLLEKNDSVGGSFNSHQFSENGLKFWLEMGAHTCYNSYQNLLDIVEACNISD
TIIPREKVPFSLLIDNKVTSLMSALNIFEVLKSIPAIFSLKKDGLSVREYYSKIVGQENYNKVLSHFFSAVPSQPTDDFP
ADMMFKSRPKRKEVLKNYTFTNGLQSVARAIAKRRGINVFTSQDVTGVEMLDGRYVITTAGGGSYSAATLALATPSAVSS
HLLQSIDPAIAGHLGKLKAASVDSVGVIIRKGDLSVKPVAALISPNDIFYSAVSRDVVPDEHFRGFAFHFKPGLSEEKKM
KRITEALGVSTAKIAHTCQVTNVVPSLRVGHKEWLESMDRMLSGKNILLTGNYFGGMAIEDCVSRSRSESERMKNM

Sequences:

>Translated_396_residues
MKSDVVIIGGGISGLSLAFYCAGAGLKTTLLEKNDSVGGSFNSHQFSENGLKFWLEMGAHTCYNSYQNLLDIVEACNISD
TIIPREKVPFSLLIDNKVTSLMSALNIFEVLKSIPAIFSLKKDGLSVREYYSKIVGQENYNKVLSHFFSAVPSQPTDDFP
ADMMFKSRPKRKEVLKNYTFTNGLQSVARAIAKRRGINVFTSQDVTGVEMLDGRYVITTAGGGSYSAATLALATPSAVSS
HLLQSIDPAIAGHLGKLKAASVDSVGVIIRKGDLSVKPVAALISPNDIFYSAVSRDVVPDEHFRGFAFHFKPGLSEEKKM
KRITEALGVSTAKIAHTCQVTNVVPSLRVGHKEWLESMDRMLSGKNILLTGNYFGGMAIEDCVSRSRSESERMKNM
>Mature_396_residues
MKSDVVIIGGGISGLSLAFYCAGAGLKTTLLEKNDSVGGSFNSHQFSENGLKFWLEMGAHTCYNSYQNLLDIVEACNISD
TIIPREKVPFSLLIDNKVTSLMSALNIFEVLKSIPAIFSLKKDGLSVREYYSKIVGQENYNKVLSHFFSAVPSQPTDDFP
ADMMFKSRPKRKEVLKNYTFTNGLQSVARAIAKRRGINVFTSQDVTGVEMLDGRYVITTAGGGSYSAATLALATPSAVSS
HLLQSIDPAIAGHLGKLKAASVDSVGVIIRKGDLSVKPVAALISPNDIFYSAVSRDVVPDEHFRGFAFHFKPGLSEEKKM
KRITEALGVSTAKIAHTCQVTNVVPSLRVGHKEWLESMDRMLSGKNILLTGNYFGGMAIEDCVSRSRSESERMKNM

Specific function: Unknown

COG id: COG1232

COG function: function code H; Protoporphyrinogen oxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43157; Mature: 43157

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDVVIIGGGISGLSLAFYCAGAGLKTTLLEKNDSVGGSFNSHQFSENGLKFWLEMGAH
CCCCEEEEECCCHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TCYNSYQNLLDIVEACNISDTIIPREKVPFSLLIDNKVTSLMSALNIFEVLKSIPAIFSL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
KKDGLSVREYYSKIVGQENYNKVLSHFFSAVPSQPTDDFPADMMFKSRPKRKEVLKNYTF
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCH
TNGLQSVARAIAKRRGINVFTSQDVTGVEMLDGRYVITTAGGGSYSAATLALATPSAVSS
HHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCEEEEEECCCCCCCCEEEEEECHHHHHH
HLLQSIDPAIAGHLGKLKAASVDSVGVIIRKGDLSVKPVAALISPNDIFYSAVSRDVVPD
HHHHHHCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHEEECCCHHHHHHHHCCCCCC
EHFRGFAFHFKPGLSEEKKMKRITEALGVSTAKIAHTCQVTNVVPSLRVGHKEWLESMDR
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
MLSGKNILLTGNYFGGMAIEDCVSRSRSESERMKNM
HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSDVVIIGGGISGLSLAFYCAGAGLKTTLLEKNDSVGGSFNSHQFSENGLKFWLEMGAH
CCCCEEEEECCCHHHHHHHHHCCCCCEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
TCYNSYQNLLDIVEACNISDTIIPREKVPFSLLIDNKVTSLMSALNIFEVLKSIPAIFSL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
KKDGLSVREYYSKIVGQENYNKVLSHFFSAVPSQPTDDFPADMMFKSRPKRKEVLKNYTF
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHCCH
TNGLQSVARAIAKRRGINVFTSQDVTGVEMLDGRYVITTAGGGSYSAATLALATPSAVSS
HHHHHHHHHHHHHHCCCEEEECCCCCCEEEECCEEEEEECCCCCCCCEEEEEECHHHHHH
HLLQSIDPAIAGHLGKLKAASVDSVGVIIRKGDLSVKPVAALISPNDIFYSAVSRDVVPD
HHHHHHCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHEEECCCHHHHHHHHCCCCCC
EHFRGFAFHFKPGLSEEKKMKRITEALGVSTAKIAHTCQVTNVVPSLRVGHKEWLESMDR
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHH
MLSGKNILLTGNYFGGMAIEDCVSRSRSESERMKNM
HHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA