| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334723
Identifier: 194334723
GI number: 194334723
Start: 2106529
End: 2107338
Strand: Reverse
Name: 194334723
Synonym: Paes_1924
Alternate gene names: NA
Gene position: 2107338-2106529 (Counterclockwise)
Preceding gene: 194334729
Following gene: 194334722
Centisome position: 83.86
GC content: 50.12
Gene sequence:
>810_bases ATGAGCGAGCGTGTCGTATTAAGAATTCTTATTGGTTTGTCAGTCGCGTTGATTTTTTCGGAACTGGTGCTGCTGATCAT CTTTGGTGTGCGTATCGAGATGATTCTTTTGCCGTTTGTCGTTTTTCTTGCTGCCGTAGGCGTTCTCCTGGGGATCGCTT TTCTTAAAGGGATGCGTCCTGAGATTGAATCGGTATCGATGCGAAGGGCCAGGGCGATGAAGGATGATATGATTCGCAAG CGTCTCGAGGGATATGAAGTCGATGAGGAGTTTATGCCGGGGGGGCGGAAAAAACGGCAGAAGGGCCGGGCTTCTGCCTT GCAGCCCCCCTTTTCTCACGAGGCTAAACCATTTACTCCGCCTGCTTCGACAAGCAGGGGCGTTGAGTCTGACCCTTTTG CCGGACTTGAGCCGAAGGTACTGGAGTTAATCGAGTCGTTCGGTGGTGTGACGCAGATGGTGCAGAAAATCGAGTCTATG GACCAGGTCTCTTATAAGCGTATGCTTTACGGTCTGAAGATGCCTGTCGTGGAAAAAGAGGAGTTTCTCCAGCCTGTTCG CCAGGCTATGGGCGGTTCCTGCCGCAGCAAAGGATCGTTGCGAACGGATCTTGATCATGAGGGGATGGATGATTATATCA AAAAAGTCCTTGCAGGTCGTGATAGATCCTCTGAGAGCAGTTCTGATACCTATTCTCTCGATATCGATCCGGGCAGTTTT TCAACGGGGAGTTCTTCGCCTCCATCAGAGTTTTCCCATAAGCCGGAAGCGGTTCTCGATCAGTTTAAACGTTCATTGAA ACGCAAATGA
Upstream 100 bases:
>100_bases CGGGATATGAGGAGTATAAGAATAATTTGCACACTTGAAATCCCTATATTACTGTCGCTGAGTCTGTTTTTATGATCTGT AATTTCAAGAGAACTGTTGC
Downstream 100 bases:
>100_bases CTTCGCAACGTTATCCTTACGCTGCCAAAGGGATGATCAAGCGCTTTGCCAGACTTCATCAGAAAAAGTATCGGGAGAGA GAGGGCTGTTTTCTTGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSERVVLRILIGLSVALIFSELVLLIIFGVRIEMILLPFVVFLAAVGVLLGIAFLKGMRPEIESVSMRRARAMKDDMIRK RLEGYEVDEEFMPGGRKKRQKGRASALQPPFSHEAKPFTPPASTSRGVESDPFAGLEPKVLELIESFGGVTQMVQKIESM DQVSYKRMLYGLKMPVVEKEEFLQPVRQAMGGSCRSKGSLRTDLDHEGMDDYIKKVLAGRDRSSESSSDTYSLDIDPGSF STGSSSPPSEFSHKPEAVLDQFKRSLKRK
Sequences:
>Translated_269_residues MSERVVLRILIGLSVALIFSELVLLIIFGVRIEMILLPFVVFLAAVGVLLGIAFLKGMRPEIESVSMRRARAMKDDMIRK RLEGYEVDEEFMPGGRKKRQKGRASALQPPFSHEAKPFTPPASTSRGVESDPFAGLEPKVLELIESFGGVTQMVQKIESM DQVSYKRMLYGLKMPVVEKEEFLQPVRQAMGGSCRSKGSLRTDLDHEGMDDYIKKVLAGRDRSSESSSDTYSLDIDPGSF STGSSSPPSEFSHKPEAVLDQFKRSLKRK >Mature_268_residues SERVVLRILIGLSVALIFSELVLLIIFGVRIEMILLPFVVFLAAVGVLLGIAFLKGMRPEIESVSMRRARAMKDDMIRKR LEGYEVDEEFMPGGRKKRQKGRASALQPPFSHEAKPFTPPASTSRGVESDPFAGLEPKVLELIESFGGVTQMVQKIESMD QVSYKRMLYGLKMPVVEKEEFLQPVRQAMGGSCRSKGSLRTDLDHEGMDDYIKKVLAGRDRSSESSSDTYSLDIDPGSFS TGSSSPPSEFSHKPEAVLDQFKRSLKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29994; Mature: 29863
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERVVLRILIGLSVALIFSELVLLIIFGVRIEMILLPFVVFLAAVGVLLGIAFLKGMRP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EIESVSMRRARAMKDDMIRKRLEGYEVDEEFMPGGRKKRQKGRASALQPPFSHEAKPFTP HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCHHHCCCCCCCCCCCCCC PASTSRGVESDPFAGLEPKVLELIESFGGVTQMVQKIESMDQVSYKRMLYGLKMPVVEKE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EFLQPVRQAMGGSCRSKGSLRTDLDHEGMDDYIKKVLAGRDRSSESSSDTYSLDIDPGSF HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC STGSSSPPSEFSHKPEAVLDQFKRSLKRK CCCCCCCCHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SERVVLRILIGLSVALIFSELVLLIIFGVRIEMILLPFVVFLAAVGVLLGIAFLKGMRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EIESVSMRRARAMKDDMIRKRLEGYEVDEEFMPGGRKKRQKGRASALQPPFSHEAKPFTP HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHCCHHHCCCCCCCCCCCCCC PASTSRGVESDPFAGLEPKVLELIESFGGVTQMVQKIESMDQVSYKRMLYGLKMPVVEKE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH EFLQPVRQAMGGSCRSKGSLRTDLDHEGMDDYIKKVLAGRDRSSESSSDTYSLDIDPGSF HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCC STGSSSPPSEFSHKPEAVLDQFKRSLKRK CCCCCCCCHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA