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The map label for this gene is ylbK [H]

Identifier: 194334716

GI number: 194334716

Start: 2098824

End: 2099627

Strand: Reverse

Name: ylbK [H]

Synonym: Paes_1917

Alternate gene names: 194334716

Gene position: 2099627-2098824 (Counterclockwise)

Preceding gene: 194334717

Following gene: 194334715

Centisome position: 83.55

GC content: 54.98

Gene sequence:

>804_bases
ATGCACAAAACGCAATCAGAAAAAAAATCAATCGCTCTGGCTCTCGGCGGCGGAGCGGTACTGGGCGCCGCTCATGTCGG
AGTGCTCAAAGCGCTCGATGAGCTCGGCATAGGTGTGTGCGCTGTTGCCGGGACCAGCATCGGCTCGTTTGTGGCGGCAT
TGCATGCGTTTGGCAAAAGCTGGCAGGAGATCGAAGCGGCTGCTCTTGAGCTGGACTGGCTCGATCTTTCAGGGCTTACT
CTTTCGCAGTACGGGGTGCTGTCCAATAAAAAGTTCGGCGGGGTCGTCAGTGACCTGCTTGGCCGACAGCGGATCGAGCA
TGCAGCGATTCCTCTTTCGATGATCGCAACCGATATTGCAACCGGAGAGATGGTCGTTATGCGTGAGGGAGATGTCGCTT
CTGCCGTGATGGCCAGTTCCTGTGTCCCGGGCGTGTTCAAGCCTGTCGAACTCGACGGGCGTATGCTTGTCGACGGCGTT
CTGGTTGAAAATGTTCCTCTTTCTCCCCTGCGGGAGTGCCAGAATCTTCCGCTTGTCTGTGTGAACCTTATGGGCGGTCA
CCGCTTCAGTCGCCCCGACAACATTGTCGGATTGCTCCTGAACGCATTCTACTGCACACTGCAAAAGACCACCACCCTGC
AGATCGGTGATGCTGATCTCGTCATCGAACCCGATATCGGGGATTTCAGTCTTGTGGAAACCTCACAGATTCCAGAACTC
ATCGAGGCTGGCTACCAGAGTTCTCTGCCGGTGCTCAGGGCTTTTTATCATTCGGTCGATGAGAAGAGTGATGTGAAATT
ATGA

Upstream 100 bases:

>100_bases
CATCGTAAAGGGACTTTTCCTGAAAACGCTCTTCGCTATCCTCCGTTCGGGTCACTGAAGTTCAAACTGTTACAGCAACT
TTTCAAACGTTTTCACTGAA

Downstream 100 bases:

>100_bases
TATTTTGCTGTGACAGATCGATTGTGTAAATTCGGTTCTATCAACGCATGTATCATGCTTGATTTTGAATGAAACAGATA
AAAATAAAACGGAGAACATC

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHKTQSEKKSIALALGGGAVLGAAHVGVLKALDELGIGVCAVAGTSIGSFVAALHAFGKSWQEIEAAALELDWLDLSGLT
LSQYGVLSNKKFGGVVSDLLGRQRIEHAAIPLSMIATDIATGEMVVMREGDVASAVMASSCVPGVFKPVELDGRMLVDGV
LVENVPLSPLRECQNLPLVCVNLMGGHRFSRPDNIVGLLLNAFYCTLQKTTTLQIGDADLVIEPDIGDFSLVETSQIPEL
IEAGYQSSLPVLRAFYHSVDEKSDVKL

Sequences:

>Translated_267_residues
MHKTQSEKKSIALALGGGAVLGAAHVGVLKALDELGIGVCAVAGTSIGSFVAALHAFGKSWQEIEAAALELDWLDLSGLT
LSQYGVLSNKKFGGVVSDLLGRQRIEHAAIPLSMIATDIATGEMVVMREGDVASAVMASSCVPGVFKPVELDGRMLVDGV
LVENVPLSPLRECQNLPLVCVNLMGGHRFSRPDNIVGLLLNAFYCTLQKTTTLQIGDADLVIEPDIGDFSLVETSQIPEL
IEAGYQSSLPVLRAFYHSVDEKSDVKL
>Mature_267_residues
MHKTQSEKKSIALALGGGAVLGAAHVGVLKALDELGIGVCAVAGTSIGSFVAALHAFGKSWQEIEAAALELDWLDLSGLT
LSQYGVLSNKKFGGVVSDLLGRQRIEHAAIPLSMIATDIATGEMVVMREGDVASAVMASSCVPGVFKPVELDGRMLVDGV
LVENVPLSPLRECQNLPLVCVNLMGGHRFSRPDNIVGLLLNAFYCTLQKTTTLQIGDADLVIEPDIGDFSLVETSQIPEL
IEAGYQSSLPVLRAFYHSVDEKSDVKL

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=172, Percent_Identity=36.046511627907, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI116256487, Length=172, Percent_Identity=36.046511627907, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI148727335, Length=273, Percent_Identity=28.2051282051282, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI260656043, Length=172, Percent_Identity=36.046511627907, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI260656039, Length=172, Percent_Identity=36.046511627907, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI260656037, Length=172, Percent_Identity=36.046511627907, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI148727290, Length=273, Percent_Identity=28.2051282051282, Blast_Score=88, Evalue=9e-18,
Organism=Escherichia coli, GI226510936, Length=174, Percent_Identity=35.0574712643678, Blast_Score=94, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71997299, Length=162, Percent_Identity=35.1851851851852, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71997289, Length=162, Percent_Identity=35.1851851851852, Blast_Score=74, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6323581, Length=178, Percent_Identity=31.4606741573034, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI281376913, Length=166, Percent_Identity=35.5421686746988, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571388, Length=166, Percent_Identity=34.3373493975904, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 28272; Mature: 28272

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKTQSEKKSIALALGGGAVLGAAHVGVLKALDELGIGVCAVAGTSIGSFVAALHAFGKS
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHHHCCC
WQEIEAAALELDWLDLSGLTLSQYGVLSNKKFGGVVSDLLGRQRIEHAAIPLSMIATDIA
HHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHC
TGEMVVMREGDVASAVMASSCVPGVFKPVELDGRMLVDGVLVENVPLSPLRECQNLPLVC
CCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEECEEEECCCCCHHHHHHCCCCEEE
VNLMGGHRFSRPDNIVGLLLNAFYCTLQKTTTLQIGDADLVIEPDIGDFSLVETSQIPEL
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCEEECHHHHHHH
IEAGYQSSLPVLRAFYHSVDEKSDVKL
HHCCCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHKTQSEKKSIALALGGGAVLGAAHVGVLKALDELGIGVCAVAGTSIGSFVAALHAFGKS
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHHHCCC
WQEIEAAALELDWLDLSGLTLSQYGVLSNKKFGGVVSDLLGRQRIEHAAIPLSMIATDIA
HHHHHHHHHEEEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHC
TGEMVVMREGDVASAVMASSCVPGVFKPVELDGRMLVDGVLVENVPLSPLRECQNLPLVC
CCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEECEEEECCCCCHHHHHHCCCCEEE
VNLMGGHRFSRPDNIVGLLLNAFYCTLQKTTTLQIGDADLVIEPDIGDFSLVETSQIPEL
EEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCEEECHHHHHHH
IEAGYQSSLPVLRAFYHSVDEKSDVKL
HHCCCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]