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The map label for this gene is yfbS [C]

Identifier: 194334553

GI number: 194334553

Start: 1908072

End: 1909853

Strand: Reverse

Name: yfbS [C]

Synonym: Paes_1749

Alternate gene names: 194334553

Gene position: 1909853-1908072 (Counterclockwise)

Preceding gene: 194334554

Following gene: 194334552

Centisome position: 76.0

GC content: 48.09

Gene sequence:

>1782_bases
ATGCTCTCCTTCGAATCCCTCATTGTTTTTTCCGCCATTCTTTTCATCATTGTCTCTCTGTACAAGGAGTTCATGAACCC
TGCGCTTACGTTTATTGTAGGGGTATTAGGGCTTGGGGTGGCTGGTATTCTTGAACCGAGAGAGATTCTTGCTGGGTTTG
CTAATGAGCAGATTGCGGTGATTGTGCTACTGTTGCTTGTTGGTGAGGTGGTGCGAAAGACTGGGGTGATCGACCAGATA
TTCGACCTCTTTTTCAGGAGTTCCAGAACATATCGGCAGTTTTTGTTTCGCATGACAGCTATTGTCAGCGGGTTGTCAGC
TTTTTTGAACAATACGCCGCTTGTAGCGGTGATGATGCCGTATGTGCATAACTGGTCGAAAGGTGAAGGACGGCCAACAC
CGTCGAAGCTGTTGATTCCGTTGTCTTATGCTTCTATTCTCGGTGGATGTGCCACGCTGATCGGGACATCCACCAACCTG
ATTGTGAACAGTATGATTACCGAGCAGCAGGTGATTCAGGGGTTGCGACCGTTGGAGATGTTCGAGTTTGCCTGGGTCGG
GGTGCCGATGATCGTGCTTGGTGGGTTGTACCTGGTTGTTGTCAGTGGTCGGTTGTTACCCGAAAACCGGGATTATTTTG
CCGAGTTCAAGGCAAATACGAGACAGTACCTTGTCGAAACACGTTTGAGGCCGGGGGCTGGTTTAGTTGGTAAAAGCGTG
AGTGAGGCCGGTCTTCGTAATCTGCAGGGTTTGTTTCTTGTCAAGGTTTTGCGTGAAGGCAATGGTATTGCGCCTGTGCA
TCCCGAGTTGAAACTGCGGCAGGATGATATTCTTGTTTTTGCCGGGGATACATCGACGATTGCTGATTTGCTTACTGCAT
ATCAGGATCTTCAGCCTGTAGAAGTAGAGTTGTTTGGGGGGAATGGGGCTGGTATGCATATGGTCGAGGGGGTTATTGCT
TACAACTCTTCTCTTGAAAACAAGACGATAAAGGAAAGCCAGTTCAGGAGCCAGTATGATGCTGCGGTTGTTGCTGTGCT
GAGAGGTGGTGAAAGAATATCCGGGAAGATTGGGTCGATATCTCTGAAAGCTGGTGATGTGCTTCTGTTGCTTGCAGGAC
GGGATTTCCAGGAGTTGACCCGTGAGAACCGGGATTTTTATGTGCTCTCGGAAACGAGAAAACCTCCGAAAGTTGAAACA
TGGAAAGCGGTGTTGCCGATTGCGGGGTTGGTGAGTGCGATAGTGCTTTCAACCCTGAAGATTGTGCCACTCTTCCTTTC
TGTATCGGTATTGCTCGCTGTTTTACTTCTGTTCAGGGTTGCTTCGGCAAAAGATATTGTTGGGGGGATCGATTATAACC
TTGTGATGATTATTGCCATGTCGCTTGCGCTTGGAGTGGCGATGACAAAAACAGGGGTTGCTGAGGTTATTGCGTCAAAT
ATGTTGCTACCAATGATGAGGTTCGGCAATATCGGGGTGATGATCGGGGTCTATGGGGTTACTGCAGTGCTGAGCTCATT
GATGCTGAATAAGGCTGCCGTTGCTTTGTTGTTTCCGGTGGTGTTGACATTAGCGCAGCAGACCGGTATGGATCCACTGG
GCTTGATTCTCTGCATGACGTTTGCTGCTGCTGCAAATTTTCTATCTCCAGTAGGTTTTCAGACGAATATGATGGTGTAT
GGACCTGGAGGGTATTCATTCAAGGATTTTTTCAGGATAGGACTGCCATTGACGATGATGTATATGGTGGTGACTGTTGG
AGTGTTGAGTGTTATGTATTGA

Upstream 100 bases:

>100_bases
AGGATCTGTTGAATCCGTTTTTTATTGTTAGGTGATCTTGATTCAGTAGCCGGTATCCGGTATTCATTTCTCCTGCGTTC
TTGTCATTCATTTATTTATC

Downstream 100 bases:

>100_bases
TTGTCGGGACAGAAGAGTTGTATTTGGTATTCATTTTAATAAATAGAACCATAGTTGATATGTTGGTTTCTTTGATTGGT
GGATCTGGATTTGTAGGGAC

Product: TrkA-C domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MLSFESLIVFSAILFIIVSLYKEFMNPALTFIVGVLGLGVAGILEPREILAGFANEQIAVIVLLLLVGEVVRKTGVIDQI
FDLFFRSSRTYRQFLFRMTAIVSGLSAFLNNTPLVAVMMPYVHNWSKGEGRPTPSKLLIPLSYASILGGCATLIGTSTNL
IVNSMITEQQVIQGLRPLEMFEFAWVGVPMIVLGGLYLVVVSGRLLPENRDYFAEFKANTRQYLVETRLRPGAGLVGKSV
SEAGLRNLQGLFLVKVLREGNGIAPVHPELKLRQDDILVFAGDTSTIADLLTAYQDLQPVEVELFGGNGAGMHMVEGVIA
YNSSLENKTIKESQFRSQYDAAVVAVLRGGERISGKIGSISLKAGDVLLLLAGRDFQELTRENRDFYVLSETRKPPKVET
WKAVLPIAGLVSAIVLSTLKIVPLFLSVSVLLAVLLLFRVASAKDIVGGIDYNLVMIIAMSLALGVAMTKTGVAEVIASN
MLLPMMRFGNIGVMIGVYGVTAVLSSLMLNKAAVALLFPVVLTLAQQTGMDPLGLILCMTFAAAANFLSPVGFQTNMMVY
GPGGYSFKDFFRIGLPLTMMYMVVTVGVLSVMY

Sequences:

>Translated_593_residues
MLSFESLIVFSAILFIIVSLYKEFMNPALTFIVGVLGLGVAGILEPREILAGFANEQIAVIVLLLLVGEVVRKTGVIDQI
FDLFFRSSRTYRQFLFRMTAIVSGLSAFLNNTPLVAVMMPYVHNWSKGEGRPTPSKLLIPLSYASILGGCATLIGTSTNL
IVNSMITEQQVIQGLRPLEMFEFAWVGVPMIVLGGLYLVVVSGRLLPENRDYFAEFKANTRQYLVETRLRPGAGLVGKSV
SEAGLRNLQGLFLVKVLREGNGIAPVHPELKLRQDDILVFAGDTSTIADLLTAYQDLQPVEVELFGGNGAGMHMVEGVIA
YNSSLENKTIKESQFRSQYDAAVVAVLRGGERISGKIGSISLKAGDVLLLLAGRDFQELTRENRDFYVLSETRKPPKVET
WKAVLPIAGLVSAIVLSTLKIVPLFLSVSVLLAVLLLFRVASAKDIVGGIDYNLVMIIAMSLALGVAMTKTGVAEVIASN
MLLPMMRFGNIGVMIGVYGVTAVLSSLMLNKAAVALLFPVVLTLAQQTGMDPLGLILCMTFAAAANFLSPVGFQTNMMVY
GPGGYSFKDFFRIGLPLTMMYMVVTVGVLSVMY
>Mature_593_residues
MLSFESLIVFSAILFIIVSLYKEFMNPALTFIVGVLGLGVAGILEPREILAGFANEQIAVIVLLLLVGEVVRKTGVIDQI
FDLFFRSSRTYRQFLFRMTAIVSGLSAFLNNTPLVAVMMPYVHNWSKGEGRPTPSKLLIPLSYASILGGCATLIGTSTNL
IVNSMITEQQVIQGLRPLEMFEFAWVGVPMIVLGGLYLVVVSGRLLPENRDYFAEFKANTRQYLVETRLRPGAGLVGKSV
SEAGLRNLQGLFLVKVLREGNGIAPVHPELKLRQDDILVFAGDTSTIADLLTAYQDLQPVEVELFGGNGAGMHMVEGVIA
YNSSLENKTIKESQFRSQYDAAVVAVLRGGERISGKIGSISLKAGDVLLLLAGRDFQELTRENRDFYVLSETRKPPKVET
WKAVLPIAGLVSAIVLSTLKIVPLFLSVSVLLAVLLLFRVASAKDIVGGIDYNLVMIIAMSLALGVAMTKTGVAEVIASN
MLLPMMRFGNIGVMIGVYGVTAVLSSLMLNKAAVALLFPVVLTLAQQTGMDPLGLILCMTFAAAANFLSPVGFQTNMMVY
GPGGYSFKDFFRIGLPLTMMYMVVTVGVLSVMY

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=587, Percent_Identity=25.8943781942078, Blast_Score=167, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64283; Mature: 64283

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFESLIVFSAILFIIVSLYKEFMNPALTFIVGVLGLGVAGILEPREILAGFANEQIAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH
IVLLLLVGEVVRKTGVIDQIFDLFFRSSRTYRQFLFRMTAIVSGLSAFLNNTPLVAVMMP
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
YVHNWSKGEGRPTPSKLLIPLSYASILGGCATLIGTSTNLIVNSMITEQQVIQGLRPLEM
HHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
FEFAWVGVPMIVLGGLYLVVVSGRLLPENRDYFAEFKANTRQYLVETRLRPGAGLVGKSV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCH
SEAGLRNLQGLFLVKVLREGNGIAPVHPELKLRQDDILVFAGDTSTIADLLTAYQDLQPV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHCCCCE
EVELFGGNGAGMHMVEGVIAYNSSLENKTIKESQFRSQYDAAVVAVLRGGERISGKIGSI
EEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEE
SLKAGDVLLLLAGRDFQELTRENRDFYVLSETRKPPKVETWKAVLPIAGLVSAIVLSTLK
EEECCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVPLFLSVSVLLAVLLLFRVASAKDIVGGIDYNLVMIIAMSLALGVAMTKTGVAEVIASN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLPMMRFGNIGVMIGVYGVTAVLSSLMLNKAAVALLFPVVLTLAQQTGMDPLGLILCMT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAAAANFLSPVGFQTNMMVYGPGGYSFKDFFRIGLPLTMMYMVVTVGVLSVMY
HHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSFESLIVFSAILFIIVSLYKEFMNPALTFIVGVLGLGVAGILEPREILAGFANEQIAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH
IVLLLLVGEVVRKTGVIDQIFDLFFRSSRTYRQFLFRMTAIVSGLSAFLNNTPLVAVMMP
HHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH
YVHNWSKGEGRPTPSKLLIPLSYASILGGCATLIGTSTNLIVNSMITEQQVIQGLRPLEM
HHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHH
FEFAWVGVPMIVLGGLYLVVVSGRLLPENRDYFAEFKANTRQYLVETRLRPGAGLVGKSV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCH
SEAGLRNLQGLFLVKVLREGNGIAPVHPELKLRQDDILVFAGDTSTIADLLTAYQDLQPV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHCCCCE
EVELFGGNGAGMHMVEGVIAYNSSLENKTIKESQFRSQYDAAVVAVLRGGERISGKIGSI
EEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEE
SLKAGDVLLLLAGRDFQELTRENRDFYVLSETRKPPKVETWKAVLPIAGLVSAIVLSTLK
EEECCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IVPLFLSVSVLLAVLLLFRVASAKDIVGGIDYNLVMIIAMSLALGVAMTKTGVAEVIASN
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLLPMMRFGNIGVMIGVYGVTAVLSSLMLNKAAVALLFPVVLTLAQQTGMDPLGLILCMT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAAAANFLSPVGFQTNMMVYGPGGYSFKDFFRIGLPLTMMYMVVTVGVLSVMY
HHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]