| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334423
Identifier: 194334423
GI number: 194334423
Start: 1759659
End: 1760714
Strand: Reverse
Name: 194334423
Synonym: Paes_1618
Alternate gene names: NA
Gene position: 1760714-1759659 (Counterclockwise)
Preceding gene: 194334424
Following gene: 194334422
Centisome position: 70.07
GC content: 52.37
Gene sequence:
>1056_bases ATGAGCAGGGCCATTTGTGAACAGCTGTTCAACTGTCGAGCCATTCAGCTATCCGGCCAGAAAGCATTTAAAATTATGAA ACTTATCGAAGTTATTGCTGCTGCCAGCAGCGTCAAAACGGTGACGGCTATCGCAGAGAAGCTCAAGGCCCGTGATTTTC GTCTTGGCCTGAAAGATGCTGATGATACGCAATTGATGCGCCTTGTTGTGCCAAACGATAAGGTGCAGGAAACGCTTGAT GCTCTCCAGAGTGTTCTCGGGGCGCAGAGCTATTCGAAACTTCTCGTCTATCCGATTGATATTTCGCTTCCAAAAATGAC GGATGCGCAGGAGGACAAAGAGGCCAAAGCGCTGCAGGCCCGTGAATCACTCTACAAGGAGGTTCAGAAAAATGCCCGCC TTGACGTCAATTATCTTGTGCTGGTCATGTTATCGACTATTGTTGCTGCTATTGGACTGATTGAAGACAATGTGGCCGTG GTGATCGGGGCGATGGTGATCGCGCCTTTGCTCGGGCCAAATCTTGCGTTCGGTCTTGGAACGGCTCTCGGGGACCTTTC CATGATGAAGAACGCTCTGAAGACCCTGGCCGCGGGAGTTGCTCTTGCTCTTATGCTTTCTGTCGTGATCGGTGTCGTAT GGCCGTTTCCGCTTACCAGTCCGGAATTGCTCACCCGTACCGATGCGGGTCTTGATTCTATTGCTCTGGCTTTTGCTTCG GGAGCGGCGGCGGCGCTTTCCCTCAGTACCGGCCTTCCAGCCGTTCTTGTCGGGGTGATGGTTGCCGTCGCTCTGCTGCC TCCGGCGGCGACTTGCGGTCTTATGGTCGGCCATGCGCGTTTCGATCTCGCGGCAGGAGCCGCGCTGCTGCTGGCAGTCA ACGTGGTCTGTGTGAATCTTTCATGCAAGCTTGTCTTTCTCATTAAGGGAATCCAGCCAAGAACATGGTGGGAGAAGGAG ACTGCAAAAAAGGCTATGCGCTCGTATATTATCATATGGGTTGTTACCCTGTTGCTTCTGGCGCTCGTTATTTCAGCAAG AACGATTTCCATATAG
Upstream 100 bases:
>100_bases GCTGTCCTGCTTCTGATCTATCTTGCCTACAATGTCTGGAGAGTTCTCGGCTGAATAATTCGAAAGTCAACCACCGGGTT TCCTGCTCGGATGTCGAGTT
Downstream 100 bases:
>100_bases TTTTCGTCAGCATCTTCGTTGACTATCCAGGTATTCAAACGGTCAGGTTATGGCAAAGTTCAGTCGCAACTACTCTCGCA AGATCGGCCTTCCTGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSRAICEQLFNCRAIQLSGQKAFKIMKLIEVIAAASSVKTVTAIAEKLKARDFRLGLKDADDTQLMRLVVPNDKVQETLD ALQSVLGAQSYSKLLVYPIDISLPKMTDAQEDKEAKALQARESLYKEVQKNARLDVNYLVLVMLSTIVAAIGLIEDNVAV VIGAMVIAPLLGPNLAFGLGTALGDLSMMKNALKTLAAGVALALMLSVVIGVVWPFPLTSPELLTRTDAGLDSIALAFAS GAAAALSLSTGLPAVLVGVMVAVALLPPAATCGLMVGHARFDLAAGAALLLAVNVVCVNLSCKLVFLIKGIQPRTWWEKE TAKKAMRSYIIIWVVTLLLLALVISARTISI
Sequences:
>Translated_351_residues MSRAICEQLFNCRAIQLSGQKAFKIMKLIEVIAAASSVKTVTAIAEKLKARDFRLGLKDADDTQLMRLVVPNDKVQETLD ALQSVLGAQSYSKLLVYPIDISLPKMTDAQEDKEAKALQARESLYKEVQKNARLDVNYLVLVMLSTIVAAIGLIEDNVAV VIGAMVIAPLLGPNLAFGLGTALGDLSMMKNALKTLAAGVALALMLSVVIGVVWPFPLTSPELLTRTDAGLDSIALAFAS GAAAALSLSTGLPAVLVGVMVAVALLPPAATCGLMVGHARFDLAAGAALLLAVNVVCVNLSCKLVFLIKGIQPRTWWEKE TAKKAMRSYIIIWVVTLLLLALVISARTISI >Mature_350_residues SRAICEQLFNCRAIQLSGQKAFKIMKLIEVIAAASSVKTVTAIAEKLKARDFRLGLKDADDTQLMRLVVPNDKVQETLDA LQSVLGAQSYSKLLVYPIDISLPKMTDAQEDKEAKALQARESLYKEVQKNARLDVNYLVLVMLSTIVAAIGLIEDNVAVV IGAMVIAPLLGPNLAFGLGTALGDLSMMKNALKTLAAGVALALMLSVVIGVVWPFPLTSPELLTRTDAGLDSIALAFASG AAAALSLSTGLPAVLVGVMVAVALLPPAATCGLMVGHARFDLAAGAALLLAVNVVCVNLSCKLVFLIKGIQPRTWWEKET AKKAMRSYIIIWVVTLLLLALVISARTISI
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI20129117, Length=245, Percent_Identity=27.3469387755102, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI281364738, Length=234, Percent_Identity=26.0683760683761, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI19921100, Length=242, Percent_Identity=26.4462809917355, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 37263; Mature: 37132
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAICEQLFNCRAIQLSGQKAFKIMKLIEVIAAASSVKTVTAIAEKLKARDFRLGLKDA CCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DDTQLMRLVVPNDKVQETLDALQSVLGAQSYSKLLVYPIDISLPKMTDAQEDKEAKALQA CCHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH RESLYKEVQKNARLDVNYLVLVMLSTIVAAIGLIEDNVAVVIGAMVIAPLLGPNLAFGLG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH TALGDLSMMKNALKTLAAGVALALMLSVVIGVVWPFPLTSPELLTRTDAGLDSIALAFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHC GAAAALSLSTGLPAVLVGVMVAVALLPPAATCGLMVGHARFDLAAGAALLLAVNVVCVNL CHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SCKLVFLIKGIQPRTWWEKETAKKAMRSYIIIWVVTLLLLALVISARTISI CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRAICEQLFNCRAIQLSGQKAFKIMKLIEVIAAASSVKTVTAIAEKLKARDFRLGLKDA CHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DDTQLMRLVVPNDKVQETLDALQSVLGAQSYSKLLVYPIDISLPKMTDAQEDKEAKALQA CCHHEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH RESLYKEVQKNARLDVNYLVLVMLSTIVAAIGLIEDNVAVVIGAMVIAPLLGPNLAFGLG HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH TALGDLSMMKNALKTLAAGVALALMLSVVIGVVWPFPLTSPELLTRTDAGLDSIALAFAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHC GAAAALSLSTGLPAVLVGVMVAVALLPPAATCGLMVGHARFDLAAGAALLLAVNVVCVNL CHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SCKLVFLIKGIQPRTWWEKETAKKAMRSYIIIWVVTLLLLALVISARTISI CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]