| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334350
Identifier: 194334350
GI number: 194334350
Start: 1685001
End: 1685789
Strand: Reverse
Name: 194334350
Synonym: Paes_1543
Alternate gene names: NA
Gene position: 1685789-1685001 (Counterclockwise)
Preceding gene: 194334351
Following gene: 194334349
Centisome position: 67.08
GC content: 51.84
Gene sequence:
>789_bases ATGGGATTTTTTGCTAAAGTGTTTGGCAGCGCATTTGAACCTGAAGCCCAACCTCCTCGTTATGATGAGGATCTTCCCGG GGTTGAGGATTGTTTCGATCGGTTGGCGGCATGGACTACCGGAAAGCGGATGGCGGATGCCGATCCGCAATATTCGTCAA TGATCAGAAGTCTGCCGCCAGGGGAAGCTACTTCGATGAGGCTTTCGCGTTCACCGGGGACAATTTCTCTTGAAGGCGAT GATCCCAGGGTTTTCGGCTATCCGGGATCTATTGAGCTCAATATGCCAACATTGACTGAGCTTGCAGGCACTCCCCGGAT ACTTCTTGACCTGGGTTATGCAGGTATTGAACATGAAGCAACGGGCATTCTTCATGATCTCGTCAACAGGACCTACCGTC TGCGAATGTCCTCTATTGCATCGAGGCGATATCCGCTGCTTCGGTTGCAGATCAGCTTCTACAGCAATTTGCGTGAACCG CTTCATCTTGAGGTTCTGTCTGATATGCTTGACTGCAATGTTCAGGATTTCTATGCCTCTTTGTGCGATTCCGGACGTTA TGAACTTTCAGTGCATGTCATGCGCGACTATATCGGGTCGGTTTTTTCCTCGGTGCCCGGCGATGAGATACAATCCCTTC ACGCCGGCATCGTCGGTCTTACCCGTGACCTCGAAGCTCTTGCTCCAGAGAGCCGCGATATGCAGCAGGCCGTCGCTGAA TTTGAGCGCCGTCATCCTCTCGGGGAGGGGATGCGGTCGGCATTGTTTACCACAAACCATCTAAAGTAG
Upstream 100 bases:
>100_bases GGGGGGCTCGTACGTAATTTGCTCTTTTTTATGTACTTTATTGTGTTCATTTCTGTTTGCAACAGGGTTTTTTCCGAGAG GTTATTCAAGGGGGATATCT
Downstream 100 bases:
>100_bases AGAGTATCCGACCTTATGACCGATGACCTTCAACTCGCCATTGAACTTGCCGATGAAGCAGGGAAGCTGACGCTGACCTA CTTTCAGAACAAATCGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGFFAKVFGSAFEPEAQPPRYDEDLPGVEDCFDRLAAWTTGKRMADADPQYSSMIRSLPPGEATSMRLSRSPGTISLEGD DPRVFGYPGSIELNMPTLTELAGTPRILLDLGYAGIEHEATGILHDLVNRTYRLRMSSIASRRYPLLRLQISFYSNLREP LHLEVLSDMLDCNVQDFYASLCDSGRYELSVHVMRDYIGSVFSSVPGDEIQSLHAGIVGLTRDLEALAPESRDMQQAVAE FERRHPLGEGMRSALFTTNHLK
Sequences:
>Translated_262_residues MGFFAKVFGSAFEPEAQPPRYDEDLPGVEDCFDRLAAWTTGKRMADADPQYSSMIRSLPPGEATSMRLSRSPGTISLEGD DPRVFGYPGSIELNMPTLTELAGTPRILLDLGYAGIEHEATGILHDLVNRTYRLRMSSIASRRYPLLRLQISFYSNLREP LHLEVLSDMLDCNVQDFYASLCDSGRYELSVHVMRDYIGSVFSSVPGDEIQSLHAGIVGLTRDLEALAPESRDMQQAVAE FERRHPLGEGMRSALFTTNHLK >Mature_261_residues GFFAKVFGSAFEPEAQPPRYDEDLPGVEDCFDRLAAWTTGKRMADADPQYSSMIRSLPPGEATSMRLSRSPGTISLEGDD PRVFGYPGSIELNMPTLTELAGTPRILLDLGYAGIEHEATGILHDLVNRTYRLRMSSIASRRYPLLRLQISFYSNLREPL HLEVLSDMLDCNVQDFYASLCDSGRYELSVHVMRDYIGSVFSSVPGDEIQSLHAGIVGLTRDLEALAPESRDMQQAVAEF ERRHPLGEGMRSALFTTNHLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29237; Mature: 29106
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFAKVFGSAFEPEAQPPRYDEDLPGVEDCFDRLAAWTTGKRMADADPQYSSMIRSLPP CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC GEATSMRLSRSPGTISLEGDDPRVFGYPGSIELNMPTLTELAGTPRILLDLGYAGIEHEA CCCCCEEEECCCCEEEECCCCCEEEECCCEEEECCCHHHHHCCCCEEEEECCCCCCCHHH TGILHDLVNRTYRLRMSSIASRRYPLLRLQISFYSNLREPLHLEVLSDMLDCNVQDFYAS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHH LCDSGRYELSVHVMRDYIGSVFSSVPGDEIQSLHAGIVGLTRDLEALAPESRDMQQAVAE HHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FERRHPLGEGMRSALFTTNHLK HHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure GFFAKVFGSAFEPEAQPPRYDEDLPGVEDCFDRLAAWTTGKRMADADPQYSSMIRSLPP CHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC GEATSMRLSRSPGTISLEGDDPRVFGYPGSIELNMPTLTELAGTPRILLDLGYAGIEHEA CCCCCEEEECCCCEEEECCCCCEEEECCCEEEECCCHHHHHCCCCEEEEECCCCCCCHHH TGILHDLVNRTYRLRMSSIASRRYPLLRLQISFYSNLREPLHLEVLSDMLDCNVQDFYAS HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHH LCDSGRYELSVHVMRDYIGSVFSSVPGDEIQSLHAGIVGLTRDLEALAPESRDMQQAVAE HHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FERRHPLGEGMRSALFTTNHLK HHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA