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The map label for this gene is rmuC [H]

Identifier: 194334348

GI number: 194334348

Start: 1682795

End: 1684147

Strand: Reverse

Name: rmuC [H]

Synonym: Paes_1541

Alternate gene names: 194334348

Gene position: 1684147-1682795 (Counterclockwise)

Preceding gene: 194334349

Following gene: 194334343

Centisome position: 67.02

GC content: 53.51

Gene sequence:

>1353_bases
ATGTTCAATGCAGTTTCTCTGGAAGCGCTGATTCTTGTTGCGCTGTTCGTTCTTCTCATTTTGCAGATTATTCTGATGCT
GCGCAGCAGCACGTCGGGCGAGAACCAACATGACCTTCAGAGCATCGAGCGATTCGTGCGTGAAGGCATTGACAGTTTAC
GGCGGGAACAGCAGGAGGAGTTTACCCGCAGCCGTCAGGAGCAGGTGCAGGCTCTGGGAGATCTTCGTGCAGAACTCATG
GCTTCCCAGAGGGAAAACCGCTCCGAACTCGGTAACTCCTTCAAGACGTTCGAGGATTCACGGCGACGCGAAGTACATGA
ACAGCAGGAATTTCAGCGCAGCAGGTTTTCCGATCTCGTTGCTGCTCAGGATCGCGTACGCATAGAGACTGCTGCAACGC
TGGATAAAATCCGCGATACCGTTGAGCTTCGTCTTGCTTCGCTTCAGGAGCAGAATGCGGCAAAGCTCGAGGAGATGCGT
GTGACCGTCGATGAAAAGCTGCAGGCGACTCTCGAAAAGCGCTTGAGTGAATCGTTCAGACAGGTCAGTGAACGCTTGCA
GAAGGTTCATGAAGGGCTTGGAGAGATGAAGAGCCTGGCGACAGGCGTGGGCGATTTGAAAAAAGTGCTGTCGAACGTCA
AAACCCGTGGTGTCCTGGGTGAAATGCAGCTGCAGAACATTCTGGCCAGCCTGCTTTCCCCTGAACAGTTTGATGAGAAT
ATCGCTACCCGTGAAGGGAGCCGCGAGCGGGTAGAGTTTGCCGTGAGACTCCCTGGAAAAGACGATGATGGGGATGTGGT
TCTGCTGCCGATTGACGCAAAATTTCCTCTTGAATCCTACTATAGGCTTCTTGAAGCAGGGGAGAAGGGCGATGCGGCTC
TGCTGAAGCAGGCATCCAAAGAGGTCGAGACGGAGATCCGGCGCTGTGCAAAAGAGATCAGCGACAAGTATCTCAACCCG
CCTCGTACGACCGATTTCGGAATTCTGTTTCTTCCTGTCGAGGGGCTGTTTGCTGAAGTCGTTCGCAATACGTCACTGCT
TGAACTCCTTCAGAGAGAGTACAATATTATTGTTACCGGCCCGACAACGCTTGCTGCACTCCTCAACAGCCTGCAGATGG
GCTTCAGGACGCTTGCGATACAGAAACGCACGAGCGAGGTCTGGAAGGTTCTTTCGCAGGTCAAAGGGGAGTTTGCTACA
TTCGGCGATGTCCTGACGCGGGCACAGAACAAACTCACGCAGGCAAGCACCGAAATCGACAGGCTTGTCGGGGTTCGGAC
ACGCAAAATTCAGAATACGCTTCGCAGCATCGATCAGGACTCCTCAGGAGAGCTTGATGCGGGCGATCGGTAA

Upstream 100 bases:

>100_bases
CTCGTCAGGGATATTCTTGGATGATCTGATCTACGCCATTTTTTTGTGAGCCTCGTTTTCCCGGTTCATATTCCTCCAAC
ACTCCTTTTCATGGTAATCT

Downstream 100 bases:

>100_bases
GGCTATGCTTTAAGGAGGGCTCCGGCAATTGCTTCTGCGAAGTGAGGTGCGTCGTAGTATCGGGGAATGATGTCAGTATT
GACACCGAGCTTTTCAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MFNAVSLEALILVALFVLLILQIILMLRSSTSGENQHDLQSIERFVREGIDSLRREQQEEFTRSRQEQVQALGDLRAELM
ASQRENRSELGNSFKTFEDSRRREVHEQQEFQRSRFSDLVAAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKLEEMR
VTVDEKLQATLEKRLSESFRQVSERLQKVHEGLGEMKSLATGVGDLKKVLSNVKTRGVLGEMQLQNILASLLSPEQFDEN
IATREGSRERVEFAVRLPGKDDDGDVVLLPIDAKFPLESYYRLLEAGEKGDAALLKQASKEVETEIRRCAKEISDKYLNP
PRTTDFGILFLPVEGLFAEVVRNTSLLELLQREYNIIVTGPTTLAALLNSLQMGFRTLAIQKRTSEVWKVLSQVKGEFAT
FGDVLTRAQNKLTQASTEIDRLVGVRTRKIQNTLRSIDQDSSGELDAGDR

Sequences:

>Translated_450_residues
MFNAVSLEALILVALFVLLILQIILMLRSSTSGENQHDLQSIERFVREGIDSLRREQQEEFTRSRQEQVQALGDLRAELM
ASQRENRSELGNSFKTFEDSRRREVHEQQEFQRSRFSDLVAAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKLEEMR
VTVDEKLQATLEKRLSESFRQVSERLQKVHEGLGEMKSLATGVGDLKKVLSNVKTRGVLGEMQLQNILASLLSPEQFDEN
IATREGSRERVEFAVRLPGKDDDGDVVLLPIDAKFPLESYYRLLEAGEKGDAALLKQASKEVETEIRRCAKEISDKYLNP
PRTTDFGILFLPVEGLFAEVVRNTSLLELLQREYNIIVTGPTTLAALLNSLQMGFRTLAIQKRTSEVWKVLSQVKGEFAT
FGDVLTRAQNKLTQASTEIDRLVGVRTRKIQNTLRSIDQDSSGELDAGDR
>Mature_450_residues
MFNAVSLEALILVALFVLLILQIILMLRSSTSGENQHDLQSIERFVREGIDSLRREQQEEFTRSRQEQVQALGDLRAELM
ASQRENRSELGNSFKTFEDSRRREVHEQQEFQRSRFSDLVAAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKLEEMR
VTVDEKLQATLEKRLSESFRQVSERLQKVHEGLGEMKSLATGVGDLKKVLSNVKTRGVLGEMQLQNILASLLSPEQFDEN
IATREGSRERVEFAVRLPGKDDDGDVVLLPIDAKFPLESYYRLLEAGEKGDAALLKQASKEVETEIRRCAKEISDKYLNP
PRTTDFGILFLPVEGLFAEVVRNTSLLELLQREYNIIVTGPTTLAALLNSLQMGFRTLAIQKRTSEVWKVLSQVKGEFAT
FGDVLTRAQNKLTQASTEIDRLVGVRTRKIQNTLRSIDQDSSGELDAGDR

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 50968; Mature: 50968

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNAVSLEALILVALFVLLILQIILMLRSSTSGENQHDLQSIERFVREGIDSLRREQQEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FTRSRQEQVQALGDLRAELMASQRENRSELGNSFKTFEDSRRREVHEQQEFQRSRFSDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKLEEMRVTVDEKLQATLEKRLSESFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSERLQKVHEGLGEMKSLATGVGDLKKVLSNVKTRGVLGEMQLQNILASLLSPEQFDEN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHH
IATREGSRERVEFAVRLPGKDDDGDVVLLPIDAKFPLESYYRLLEAGEKGDAALLKQASK
HHHCCCCHHHHEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
EVETEIRRCAKEISDKYLNPPRTTDFGILFLPVEGLFAEVVRNTSLLELLQREYNIIVTG
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHHHCCEEEEC
PTTLAALLNSLQMGFRTLAIQKRTSEVWKVLSQVKGEFATFGDVLTRAQNKLTQASTEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLVGVRTRKIQNTLRSIDQDSSGELDAGDR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFNAVSLEALILVALFVLLILQIILMLRSSTSGENQHDLQSIERFVREGIDSLRREQQEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FTRSRQEQVQALGDLRAELMASQRENRSELGNSFKTFEDSRRREVHEQQEFQRSRFSDLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKLEEMRVTVDEKLQATLEKRLSESFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVSERLQKVHEGLGEMKSLATGVGDLKKVLSNVKTRGVLGEMQLQNILASLLSPEQFDEN
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHH
IATREGSRERVEFAVRLPGKDDDGDVVLLPIDAKFPLESYYRLLEAGEKGDAALLKQASK
HHHCCCCHHHHEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH
EVETEIRRCAKEISDKYLNPPRTTDFGILFLPVEGLFAEVVRNTSLLELLQREYNIIVTG
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCHHHHHHHHHHCCEEEEC
PTTLAALLNSLQMGFRTLAIQKRTSEVWKVLSQVKGEFATFGDVLTRAQNKLTQASTEID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLVGVRTRKIQNTLRSIDQDSSGELDAGDR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]