Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194334285

Identifier: 194334285

GI number: 194334285

Start: 1617497

End: 1618066

Strand: Reverse

Name: 194334285

Synonym: Paes_1478

Alternate gene names: NA

Gene position: 1618066-1617497 (Counterclockwise)

Preceding gene: 194334295

Following gene: 194334284

Centisome position: 64.39

GC content: 51.05

Gene sequence:

>570_bases
ATGAAAAAGGTTTACTCAATGGTGTCATTTTTACTGCTGCTTGTTCTCGCATCATGTTCAAGCGTTTCAGTTGTTTCGGA
TTACGACAGGGTTTTCGATTTCAGCCGATTCCAGACCTATCGCTGGCCGATAGCGGGAGAAGGCATCAGGCAGGGTGACC
TGCTTGTTCAGAATCCTCTGGTCTACAAAAGGGTCCAGAGTGCTGTCGACCGGGAGCTTCAGCAGAAAGGTTTTCACAGG
AGTTCGTCAGAGAGTGCCGATTTCATCCTTCATGTGCACGCAGGAGTCAAACAGGTCAAAAGCTATCAGCCGCACTATGG
GGTGGCATTTCCTTTACGGGGAGGCTGGTACCGTCCCTGGTGGGGAGCCTATGGAGGCTTCACCTCTGTGAGTTACTATG
AAGAAGGCACCCTGGTTGTTGATATCATCGATGCCGGTACTAAAGATATGGTCTGGCGGGGCATGGCGAAAAGAATCGTC
AGGCAATACGGCAGTCCCGAAGCCATGCAGAAGGATATCGACGATGCTGTCAGGCGTGTTCTGGCCGAATTTCCTCCGTT
GCGTCAATAA

Upstream 100 bases:

>100_bases
GCGCAGCCCTCAAGAAACTTACAAAAAGTTTCGGCTGTTGAAGTATAAAGAGGTCCAGAACTGGTCATGTATCTTATCTC
TAACGGAGCAGGAGTCTGTT

Downstream 100 bases:

>100_bases
CGCTTCTTGAGGGCACCTCTCTTCATTGTCGTGAGCGAGTTGAAGACAAGGCGGACGGAGCAGAGAAACCGGAGTCCCGT
CAAGTCGGGATGAGGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKVYSMVSFLLLLVLASCSSVSVVSDYDRVFDFSRFQTYRWPIAGEGIRQGDLLVQNPLVYKRVQSAVDRELQQKGFHR
SSSESADFILHVHAGVKQVKSYQPHYGVAFPLRGGWYRPWWGAYGGFTSVSYYEEGTLVVDIIDAGTKDMVWRGMAKRIV
RQYGSPEAMQKDIDDAVRRVLAEFPPLRQ

Sequences:

>Translated_189_residues
MKKVYSMVSFLLLLVLASCSSVSVVSDYDRVFDFSRFQTYRWPIAGEGIRQGDLLVQNPLVYKRVQSAVDRELQQKGFHR
SSSESADFILHVHAGVKQVKSYQPHYGVAFPLRGGWYRPWWGAYGGFTSVSYYEEGTLVVDIIDAGTKDMVWRGMAKRIV
RQYGSPEAMQKDIDDAVRRVLAEFPPLRQ
>Mature_189_residues
MKKVYSMVSFLLLLVLASCSSVSVVSDYDRVFDFSRFQTYRWPIAGEGIRQGDLLVQNPLVYKRVQSAVDRELQQKGFHR
SSSESADFILHVHAGVKQVKSYQPHYGVAFPLRGGWYRPWWGAYGGFTSVSYYEEGTLVVDIIDAGTKDMVWRGMAKRIV
RQYGSPEAMQKDIDDAVRRVLAEFPPLRQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21609; Mature: 21609

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVYSMVSFLLLLVLASCSSVSVVSDYDRVFDFSRFQTYRWPIAGEGIRQGDLLVQNPL
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCH
VYKRVQSAVDRELQQKGFHRSSSESADFILHVHAGVKQVKSYQPHYGVAFPLRGGWYRPW
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCC
WGAYGGFTSVSYYEEGTLVVDIIDAGTKDMVWRGMAKRIVRQYGSPEAMQKDIDDAVRRV
CCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LAEFPPLRQ
HHHCCCCCC
>Mature Secondary Structure
MKKVYSMVSFLLLLVLASCSSVSVVSDYDRVFDFSRFQTYRWPIAGEGIRQGDLLVQNPL
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCH
VYKRVQSAVDRELQQKGFHRSSSESADFILHVHAGVKQVKSYQPHYGVAFPLRGGWYRPW
HHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCEEEECCCCCCCCC
WGAYGGFTSVSYYEEGTLVVDIIDAGTKDMVWRGMAKRIVRQYGSPEAMQKDIDDAVRRV
CCCCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LAEFPPLRQ
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA