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The map label for this gene is bchD [H]

Identifier: 194334244

GI number: 194334244

Start: 1567016

End: 1568875

Strand: Reverse

Name: bchD [H]

Synonym: Paes_1437

Alternate gene names: 194334244

Gene position: 1568875-1567016 (Counterclockwise)

Preceding gene: 194334245

Following gene: 194334243

Centisome position: 62.43

GC content: 52.74

Gene sequence:

>1860_bases
ATGATAGCATTTACCGATATTGTAGGAATGGATCTGGCCAAGCAGGCACTTATGCTGCTGGCTATAGATCCTTCTCTTGG
CGGGGTTGTTATCCCGGCGGCTGTCGGCTCTGGTAAATCAACCCTTGCAAGAGCTTTTCAGGATATTCTTCCGGAACAAA
CGCCATTTGTTGAATTACCGCTGAACGTTACGGAAGACCGGCTTATCGGTGGCGTCGATCTCGAGGCGACCCTTGTAAAA
GGAGCTCGTGTGGTCCAGCACGGTGTGCTATCCAAGGCTCACGAAGGTGTTCTGTATGTCGATTCACTGAGCCTTCTGGA
CAGTTCAGCAGTCTCTCATGTCATGGATGCTATGTCGAGGGGCGAGGTTCTGGTTGAACGTGAAGGATTGAGCGAGGTGC
ACCCGTCGAAATTCATGATTGTCGGAACATACGATCCTTCTGATGGTGAGGTGCGCATGGGATTGCTCGACAGGGTTGGT
CTTATTGTGCCGTTTACCACTCAGAACGATTTTCGTGCCCGCAAACAGATTCTCCAATGCAACATAGGTCAGAAAGACGC
AGAGGATACCCAGGATGAGCTGAGAATGCTCAAGGGAATTCTCGACGCGGCACGAAAGCTGCTTCCGCAGGTTTCGATGA
CCAAAGAGCAGATTCAGGGTCTGATCCAGTCGGCTATCAGTCTCGGCGTCGAAGGTAACCGTGTCGATATTTTTGTTATC
AGGGCAGCACTGGCCAGTGCCGCGCTTGCCCAGAGGACCGATGTCGACGAAGAGGATATGAAACTTGCTGTTAAGCTTGT
CCTTGTTCCGCGTGCGACATGTATGCCGCAGCGAGAAGAGGAGGTTGAGGAGCAGATGCCGCCTGAAGAGGAGATGCCGC
CCGAAGAGCCGGAAGCAGAGGACGAGGAGGCTCCGCCGGACAACTCTGATCCCGATGCTGAAGAGGAGAATGAGGAGACT
CCAGACATGATCGAGGAATTGATGATGGACGCTATCGAGACCGAACTGCCTGAAAACCTCATGAATATTTCGCTTGCTTC
GAAAAAGAAGAGCAAGTCAGGCAGCCGCGGTGAAGCGCTCAATAACCGTCGCGGTCGTTTTGTTCGCTCCCAGCCGGGCG
AAATTCGCGGTGGCAAAGTCGCTTTGATTCCAACGCTTATTTCCGCAGCCCCGTGGCAGGAGAGCAGACGTCTTGAACGT
CTTCGCAAAACCGGCAAGGTCTCTACGACGGGTCTTATCATCAACAAGGAAGATGTGAAAGTCAAGAAGTTTCGTGACAA
ATCCGGAACGCTTTTCATTTTCATAGTCGATGCCTCCGGTTCGATGGCGCTTAACCGTATGCGTCAGGCCAAGGGTGCGG
TGTCGCATCTTCTGCAGAACGCCTATGTTCATCGTGATCAGGTTGCGTTGATTTCCTTCAGGGGGAAGGAAGCGCAGCTT
CTTTTGCCGCCGTCCCAGAGTGTGGACCGAGCAAAACGCGAACTCGATGTGCTCCCGACAGGCGGCGGAACACCGTTGGC
TTCAGCCATCTATCTTGCCTGGGAAACCGCCAAGCAGGCCAGGACGAAAGGTGTTTCCCAGATCATGTTTGTGCTGATCA
CTGATGGTCGTGGTAACATCGGGCTGCAGTCCATGATGGATAAAAATGCTCCGAAAGCGCCTAAGGAAGAGATCGAGAAA
GAGGTTGAAGCCCTGGCAGCATCAGTCTATGCCGACGGGATCGCATCGATCGTTGTCGATACGCAGATGAATTATCTCTC
AAGAGGTGAAGCGCCTAAACTCGCTGAAAAGCTGGGGGGCAGGTATTTCTATCTTCCAAACGCAAAAGCTGAGCAGATCG
CCGAAGCGGCAATGAGTTGA

Upstream 100 bases:

>100_bases
TCACCGTTTGCGCAAAGATCCGCTCGAGACTCTCGACGCTGGTGAAAAAATCGAACGTGAACTTGCAAAAGTGCTTGGAG
AAGCAGAAGAAGTATAATTA

Downstream 100 bases:

>100_bases
TATCATCATCTATCAGAAACAATCAAAACCTCCCCCTGTTTTCATTGAACAGAGGGAGGTTTTTGTTTTTAGTCCTTGAT
TGGCGTGCTGTGTGCGGCTT

Product: magnesium chelatase ATPase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 619; Mature: 619

Protein sequence:

>619_residues
MIAFTDIVGMDLAKQALMLLAIDPSLGGVVIPAAVGSGKSTLARAFQDILPEQTPFVELPLNVTEDRLIGGVDLEATLVK
GARVVQHGVLSKAHEGVLYVDSLSLLDSSAVSHVMDAMSRGEVLVEREGLSEVHPSKFMIVGTYDPSDGEVRMGLLDRVG
LIVPFTTQNDFRARKQILQCNIGQKDAEDTQDELRMLKGILDAARKLLPQVSMTKEQIQGLIQSAISLGVEGNRVDIFVI
RAALASAALAQRTDVDEEDMKLAVKLVLVPRATCMPQREEEVEEQMPPEEEMPPEEPEAEDEEAPPDNSDPDAEEENEET
PDMIEELMMDAIETELPENLMNISLASKKKSKSGSRGEALNNRRGRFVRSQPGEIRGGKVALIPTLISAAPWQESRRLER
LRKTGKVSTTGLIINKEDVKVKKFRDKSGTLFIFIVDASGSMALNRMRQAKGAVSHLLQNAYVHRDQVALISFRGKEAQL
LLPPSQSVDRAKRELDVLPTGGGTPLASAIYLAWETAKQARTKGVSQIMFVLITDGRGNIGLQSMMDKNAPKAPKEEIEK
EVEALAASVYADGIASIVVDTQMNYLSRGEAPKLAEKLGGRYFYLPNAKAEQIAEAAMS

Sequences:

>Translated_619_residues
MIAFTDIVGMDLAKQALMLLAIDPSLGGVVIPAAVGSGKSTLARAFQDILPEQTPFVELPLNVTEDRLIGGVDLEATLVK
GARVVQHGVLSKAHEGVLYVDSLSLLDSSAVSHVMDAMSRGEVLVEREGLSEVHPSKFMIVGTYDPSDGEVRMGLLDRVG
LIVPFTTQNDFRARKQILQCNIGQKDAEDTQDELRMLKGILDAARKLLPQVSMTKEQIQGLIQSAISLGVEGNRVDIFVI
RAALASAALAQRTDVDEEDMKLAVKLVLVPRATCMPQREEEVEEQMPPEEEMPPEEPEAEDEEAPPDNSDPDAEEENEET
PDMIEELMMDAIETELPENLMNISLASKKKSKSGSRGEALNNRRGRFVRSQPGEIRGGKVALIPTLISAAPWQESRRLER
LRKTGKVSTTGLIINKEDVKVKKFRDKSGTLFIFIVDASGSMALNRMRQAKGAVSHLLQNAYVHRDQVALISFRGKEAQL
LLPPSQSVDRAKRELDVLPTGGGTPLASAIYLAWETAKQARTKGVSQIMFVLITDGRGNIGLQSMMDKNAPKAPKEEIEK
EVEALAASVYADGIASIVVDTQMNYLSRGEAPKLAEKLGGRYFYLPNAKAEQIAEAAMS
>Mature_619_residues
MIAFTDIVGMDLAKQALMLLAIDPSLGGVVIPAAVGSGKSTLARAFQDILPEQTPFVELPLNVTEDRLIGGVDLEATLVK
GARVVQHGVLSKAHEGVLYVDSLSLLDSSAVSHVMDAMSRGEVLVEREGLSEVHPSKFMIVGTYDPSDGEVRMGLLDRVG
LIVPFTTQNDFRARKQILQCNIGQKDAEDTQDELRMLKGILDAARKLLPQVSMTKEQIQGLIQSAISLGVEGNRVDIFVI
RAALASAALAQRTDVDEEDMKLAVKLVLVPRATCMPQREEEVEEQMPPEEEMPPEEPEAEDEEAPPDNSDPDAEEENEET
PDMIEELMMDAIETELPENLMNISLASKKKSKSGSRGEALNNRRGRFVRSQPGEIRGGKVALIPTLISAAPWQESRRLER
LRKTGKVSTTGLIINKEDVKVKKFRDKSGTLFIFIVDASGSMALNRMRQAKGAVSHLLQNAYVHRDQVALISFRGKEAQL
LLPPSQSVDRAKRELDVLPTGGGTPLASAIYLAWETAKQARTKGVSQIMFVLITDGRGNIGLQSMMDKNAPKAPKEEIEK
EVEALAASVYADGIASIVVDTQMNYLSRGEAPKLAEKLGGRYFYLPNAKAEQIAEAAMS

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 67557; Mature: 67557

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFTDIVGMDLAKQALMLLAIDPSLGGVVIPAAVGSGKSTLARAFQDILPEQTPFVELP
CEEEHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEC
LNVTEDRLIGGVDLEATLVKGARVVQHGVLSKAHEGVLYVDSLSLLDSSAVSHVMDAMSR
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHC
GEVLVEREGLSEVHPSKFMIVGTYDPSDGEVRMGLLDRVGLIVPFTTQNDFRARKQILQC
CCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCEEEEECCCCHHHHHHHHHHC
NIGQKDAEDTQDELRMLKGILDAARKLLPQVSMTKEQIQGLIQSAISLGVEGNRVDIFVI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEH
RAALASAALAQRTDVDEEDMKLAVKLVLVPRATCMPQREEEVEEQMPPEEEMPPEEPEAE
HHHHHHHHHHHHCCCCHHHHHEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DEEAPPDNSDPDAEEENEETPDMIEELMMDAIETELPENLMNISLASKKKSKSGSRGEAL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
NNRRGRFVRSQPGEIRGGKVALIPTLISAAPWQESRRLERLRKTGKVSTTGLIINKEDVK
HCCCCCEECCCCCCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCE
VKKFRDKSGTLFIFIVDASGSMALNRMRQAKGAVSHLLQNAYVHRDQVALISFRGKEAQL
EEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
LLPPSQSVDRAKRELDVLPTGGGTPLASAIYLAWETAKQARTKGVSQIMFVLITDGRGNI
EECCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
GLQSMMDKNAPKAPKEEIEKEVEALAASVYADGIASIVVDTQMNYLSRGEAPKLAEKLGG
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
RYFYLPNAKAEQIAEAAMS
EEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAFTDIVGMDLAKQALMLLAIDPSLGGVVIPAAVGSGKSTLARAFQDILPEQTPFVELP
CEEEHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEC
LNVTEDRLIGGVDLEATLVKGARVVQHGVLSKAHEGVLYVDSLSLLDSSAVSHVMDAMSR
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHC
GEVLVEREGLSEVHPSKFMIVGTYDPSDGEVRMGLLDRVGLIVPFTTQNDFRARKQILQC
CCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEHHHHCCEEEEECCCCHHHHHHHHHHC
NIGQKDAEDTQDELRMLKGILDAARKLLPQVSMTKEQIQGLIQSAISLGVEGNRVDIFVI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEH
RAALASAALAQRTDVDEEDMKLAVKLVLVPRATCMPQREEEVEEQMPPEEEMPPEEPEAE
HHHHHHHHHHHHCCCCHHHHHEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
DEEAPPDNSDPDAEEENEETPDMIEELMMDAIETELPENLMNISLASKKKSKSGSRGEAL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHH
NNRRGRFVRSQPGEIRGGKVALIPTLISAAPWQESRRLERLRKTGKVSTTGLIINKEDVK
HCCCCCEECCCCCCCCCCEEEEHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCE
VKKFRDKSGTLFIFIVDASGSMALNRMRQAKGAVSHLLQNAYVHRDQVALISFRGKEAQL
EEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
LLPPSQSVDRAKRELDVLPTGGGTPLASAIYLAWETAKQARTKGVSQIMFVLITDGRGNI
EECCCHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
GLQSMMDKNAPKAPKEEIEKEVEALAASVYADGIASIVVDTQMNYLSRGEAPKLAEKLGG
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
RYFYLPNAKAEQIAEAAMS
EEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]