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The map label for this gene is 194334111

Identifier: 194334111

GI number: 194334111

Start: 1418690

End: 1419934

Strand: Reverse

Name: 194334111

Synonym: Paes_1299

Alternate gene names: NA

Gene position: 1419934-1418690 (Counterclockwise)

Preceding gene: 194334112

Following gene: 194334110

Centisome position: 56.51

GC content: 55.18

Gene sequence:

>1245_bases
ATGACTGAGCGGGTTGCAGTACACCTCCGGCCCTGTGAATCCCTGACATCAGGTGCAGGGCGGTTATCGGCAGTGATGCC
GATGCTCCTGCTTGCGGTCTTTCTTCTTTTTTCCGGCTGTTCTGCAGAGAACCCTGGTAACGGCGAGGAGGCCCCGGAGC
GTGCCGAGCCGGAAAACGCACTTGCCGGTAACGGCCTCGAGTATGCCGGAGGGTTTTCCATCAAGGAGTTTGCCGGGTTC
CGAACGCTCGAAGTCCGGGCTGGTGTTCCTGGCAACGACGGCCTGCTGAGTTACCTGCTTCTCGAACCCGGCCAGCCGGT
GCCGGAAGGGTATGATGATCATATTGTCGTCAGGACCCCTGTCGAGAGGGTTGCCGTGTTTTCTACGACGCATATCGGCT
TCATCGATCTGCTTGAATGCACCGACAGGATTATCGGGGTCGCCCGTCCGGAATTTGTCAATACCCCTTCGGTGCAGGAG
AGAATTCAGGATGGACAGATCACGGAGATCGGTATGCCGTTCAGTCCGAACCTTGAAATTATTCTCGAACTCGATCCCGA
TCTCATTATTGCGACAGCTCTTCCTCCGGCCAGGAGAACTGAGTACAATGCCATTATCGATGCCGGTATTCCTGTCGTTG
TCGTATCTGAGTGGCTTGAGTCTTCTCCACTGGGTAGGGCGGAGTGGGTGAAGCTGTATGCTGCGTTGTTCGGCAAAGAG
CAGCTCGCACAAGAAAAATTTCGTCAGATCAGTGATGCGTACCACGGCCTGCGAGCCCTTACCCGCGATGTTGCCGACAG
GCCGTCGGTTATTTCAAGCCTGCCAAGAAAGGATGCGTGGTTCGTTCCCGGTGGCGACAGTTATGTGGCAGCGCTCCTGC
GCGATGCAGGAGCATCGTACCATTGGAGTGACCTGAAGACAACCGGAAGCATCAAGATGGATATCGAGCCGGTGTACCAG
GTGGCTCTCGATGCGGATTTCTGGCTTAATCCGGGAACCGTGCTGAATCTCGACGAACTGCTTTCGAACGACCTGCGCTT
CCGGGATTTTTCTTCTGTGCAGCATGGCAGGGTTTATAACAATAACCGCCTGCTCAACCCGGCAGGGGGCAATGCATACT
GGGAGTTCGGTGTTGTCCAGCCCGAACGGATTCTCAAGGACCTGATCATGATCCTGCACCCTGACATTGCGGAGCGTGAA
GGGTTTCAGGATGATTCTCTAACGTTTTACCATCTTATCGATTGA

Upstream 100 bases:

>100_bases
TATAGCTGCATAGTGATGTGCTCGGCTTGCGAGAAGATCTGTGCAGCCGGGGCAATTTCATTCCCACCAAAAGAGGATTT
TGAGCAGTATGTGGAGTATT

Downstream 100 bases:

>100_bases
CATGAGTGTTGATGATACCGCTTCCGGGGGCGCGCATCCCTGGCCCCGGCTTACCTTGCGGCTTCCTCTCGTGATGCTGC
TTCTGGCACTGGTGCTTTTC

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTERVAVHLRPCESLTSGAGRLSAVMPMLLLAVFLLFSGCSAENPGNGEEAPERAEPENALAGNGLEYAGGFSIKEFAGF
RTLEVRAGVPGNDGLLSYLLLEPGQPVPEGYDDHIVVRTPVERVAVFSTTHIGFIDLLECTDRIIGVARPEFVNTPSVQE
RIQDGQITEIGMPFSPNLEIILELDPDLIIATALPPARRTEYNAIIDAGIPVVVVSEWLESSPLGRAEWVKLYAALFGKE
QLAQEKFRQISDAYHGLRALTRDVADRPSVISSLPRKDAWFVPGGDSYVAALLRDAGASYHWSDLKTTGSIKMDIEPVYQ
VALDADFWLNPGTVLNLDELLSNDLRFRDFSSVQHGRVYNNNRLLNPAGGNAYWEFGVVQPERILKDLIMILHPDIAERE
GFQDDSLTFYHLID

Sequences:

>Translated_414_residues
MTERVAVHLRPCESLTSGAGRLSAVMPMLLLAVFLLFSGCSAENPGNGEEAPERAEPENALAGNGLEYAGGFSIKEFAGF
RTLEVRAGVPGNDGLLSYLLLEPGQPVPEGYDDHIVVRTPVERVAVFSTTHIGFIDLLECTDRIIGVARPEFVNTPSVQE
RIQDGQITEIGMPFSPNLEIILELDPDLIIATALPPARRTEYNAIIDAGIPVVVVSEWLESSPLGRAEWVKLYAALFGKE
QLAQEKFRQISDAYHGLRALTRDVADRPSVISSLPRKDAWFVPGGDSYVAALLRDAGASYHWSDLKTTGSIKMDIEPVYQ
VALDADFWLNPGTVLNLDELLSNDLRFRDFSSVQHGRVYNNNRLLNPAGGNAYWEFGVVQPERILKDLIMILHPDIAERE
GFQDDSLTFYHLID
>Mature_413_residues
TERVAVHLRPCESLTSGAGRLSAVMPMLLLAVFLLFSGCSAENPGNGEEAPERAEPENALAGNGLEYAGGFSIKEFAGFR
TLEVRAGVPGNDGLLSYLLLEPGQPVPEGYDDHIVVRTPVERVAVFSTTHIGFIDLLECTDRIIGVARPEFVNTPSVQER
IQDGQITEIGMPFSPNLEIILELDPDLIIATALPPARRTEYNAIIDAGIPVVVVSEWLESSPLGRAEWVKLYAALFGKEQ
LAQEKFRQISDAYHGLRALTRDVADRPSVISSLPRKDAWFVPGGDSYVAALLRDAGASYHWSDLKTTGSIKMDIEPVYQV
ALDADFWLNPGTVLNLDELLSNDLRFRDFSSVQHGRVYNNNRLLNPAGGNAYWEFGVVQPERILKDLIMILHPDIAEREG
FQDDSLTFYHLID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 45689; Mature: 45558

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERVAVHLRPCESLTSGAGRLSAVMPMLLLAVFLLFSGCSAENPGNGEEAPERAEPENA
CCCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
LAGNGLEYAGGFSIKEFAGFRTLEVRAGVPGNDGLLSYLLLEPGQPVPEGYDDHIVVRTP
CCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECC
VERVAVFSTTHIGFIDLLECTDRIIGVARPEFVNTPSVQERIQDGQITEIGMPFSPNLEI
HHHHEEHEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCEE
ILELDPDLIIATALPPARRTEYNAIIDAGIPVVVVSEWLESSPLGRAEWVKLYAALFGKE
EEEECCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHH
QLAQEKFRQISDAYHGLRALTRDVADRPSVISSLPRKDAWFVPGGDSYVAALLRDAGASY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCE
HWSDLKTTGSIKMDIEPVYQVALDADFWLNPGTVLNLDELLSNDLRFRDFSSVQHGRVYN
ECCCCCCCCCEEEEHHHHHHHHCCCCEEECCCCEEEHHHHHCCCCCCCCCCCCCCCEEEC
NNRLLNPAGGNAYWEFGVVQPERILKDLIMILHPDIAEREGFQDDSLTFYHLID
CCEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure 
TERVAVHLRPCESLTSGAGRLSAVMPMLLLAVFLLFSGCSAENPGNGEEAPERAEPENA
CCEEEEEEECHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
LAGNGLEYAGGFSIKEFAGFRTLEVRAGVPGNDGLLSYLLLEPGQPVPEGYDDHIVVRTP
CCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEECC
VERVAVFSTTHIGFIDLLECTDRIIGVARPEFVNTPSVQERIQDGQITEIGMPFSPNLEI
HHHHEEHEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCEE
ILELDPDLIIATALPPARRTEYNAIIDAGIPVVVVSEWLESSPLGRAEWVKLYAALFGKE
EEEECCCEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHH
QLAQEKFRQISDAYHGLRALTRDVADRPSVISSLPRKDAWFVPGGDSYVAALLRDAGASY
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCE
HWSDLKTTGSIKMDIEPVYQVALDADFWLNPGTVLNLDELLSNDLRFRDFSSVQHGRVYN
ECCCCCCCCCEEEEHHHHHHHHCCCCEEECCCCEEEHHHHHCCCCCCCCCCCCCCCEEEC
NNRLLNPAGGNAYWEFGVVQPERILKDLIMILHPDIAEREGFQDDSLTFYHLID
CCEEECCCCCCCEEEECCCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]