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The map label for this gene is todF [H]

Identifier: 194334066

GI number: 194334066

Start: 1355644

End: 1356540

Strand: Reverse

Name: todF [H]

Synonym: Paes_1253

Alternate gene names: 194334066

Gene position: 1356540-1355644 (Counterclockwise)

Preceding gene: 194334067

Following gene: 194334065

Centisome position: 53.98

GC content: 51.95

Gene sequence:

>897_bases
ATGAGAGAAGAATCTTTTGATCAGTCAGTACGGCGGCTCAAGGATGACGACAGCCGTTTTGTTGCCTGCAACGGTTTTGA
TGTCCATTACAAACTTCTGGGGTCGGGCAGCCCCCCTCTTGTAGTGCTTCTGCATGGCAGTTTTCTCAGTATTCGTTCCT
GGAGGGAGGTCATCGGGCCGCTTTCGCGTACAGCAACCGTTCTTGCATTCGATCGTCCCGCATTTGGTCTGACCTCCCGT
CCGGTGCCATCGCCTCAATCAGAGGTGCAATACAGTCCCGAAGCGCAAAGTGATCTTATCGTTGCCCTGATGAAGAAGCT
GGGTTTCGACAAAGCTATTCTTGTCGGCAATTCAACCGGAGGAACACTTGCGATGCTGACGGCGCTTCGCTATCCTCAGC
ATGTGCAGGGTATTGTGCTTGCAGGAGCGATGATTTACAGTGGTTATGCGACCAGCCAAATGCCTCCTTTTATGAAACCG
TTCATGAAAGCTCTGACCCCGGCTTTTTCGCGTTTGATGAAGGCGCTGATTACCAGGCTTTACGACCGCAATATCCGGGG
ATTCTGGCATGTCAAGGAGCGTCTTGACGATGCTACGCTTGCTGCTTTCCGCCAGGATCTGATGATTGGCGACTGGTCCC
GCGGTTTCTGGGAGCTGTTTCTTGAAACACATCACCTTCATCTCGATGAGCGATTGAAAACCCTTTCGATTCCATCCCTT
GTCGTGACAGGAGAGCAGGATCTTACCATAAACACAGAAGAGAGCCTTCGTCTTGCCAATGAATTGCCCGGCGCTGCATT
AGAGGTGATTCCCGATTGCGGACACCTTCCTCAGGAAGAGGCTCCTGAAGCTTTTGTTGCCGTCGTCGAATCCTTTATCG
GGAGGGTCCGCTCATAA

Upstream 100 bases:

>100_bases
GCCATGCAGGTTGTCGAGGCTTCTGTAAAACTGTACAATGAAATGGCGACGTTCAGTTCCGCCAGTGTTTCGGGAAAATC
AGTGTGATTACACGTGTGCA

Downstream 100 bases:

>100_bases
TGCTCGACGGTCTTGTCACTGCTATGCGGACTCTCACTGTTCTTTCTGTGCCCGGAAAAGATGCAGACGAGTTCAGTCGT
TCCCTCTACTGGTTTCCTCT

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: HOHH [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MREESFDQSVRRLKDDDSRFVACNGFDVHYKLLGSGSPPLVVLLHGSFLSIRSWREVIGPLSRTATVLAFDRPAFGLTSR
PVPSPQSEVQYSPEAQSDLIVALMKKLGFDKAILVGNSTGGTLAMLTALRYPQHVQGIVLAGAMIYSGYATSQMPPFMKP
FMKALTPAFSRLMKALITRLYDRNIRGFWHVKERLDDATLAAFRQDLMIGDWSRGFWELFLETHHLHLDERLKTLSIPSL
VVTGEQDLTINTEESLRLANELPGAALEVIPDCGHLPQEEAPEAFVAVVESFIGRVRS

Sequences:

>Translated_298_residues
MREESFDQSVRRLKDDDSRFVACNGFDVHYKLLGSGSPPLVVLLHGSFLSIRSWREVIGPLSRTATVLAFDRPAFGLTSR
PVPSPQSEVQYSPEAQSDLIVALMKKLGFDKAILVGNSTGGTLAMLTALRYPQHVQGIVLAGAMIYSGYATSQMPPFMKP
FMKALTPAFSRLMKALITRLYDRNIRGFWHVKERLDDATLAAFRQDLMIGDWSRGFWELFLETHHLHLDERLKTLSIPSL
VVTGEQDLTINTEESLRLANELPGAALEVIPDCGHLPQEEAPEAFVAVVESFIGRVRS
>Mature_298_residues
MREESFDQSVRRLKDDDSRFVACNGFDVHYKLLGSGSPPLVVLLHGSFLSIRSWREVIGPLSRTATVLAFDRPAFGLTSR
PVPSPQSEVQYSPEAQSDLIVALMKKLGFDKAILVGNSTGGTLAMLTALRYPQHVQGIVLAGAMIYSGYATSQMPPFMKP
FMKALTPAFSRLMKALITRLYDRNIRGFWHVKERLDDATLAAFRQDLMIGDWSRGFWELFLETHHLHLDERLKTLSIPSL
VVTGEQDLTINTEESLRLANELPGAALEVIPDCGHLPQEEAPEAFVAVVESFIGRVRS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17558492, Length=104, Percent_Identity=37.5, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32566936, Length=104, Percent_Identity=37.5, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33215; Mature: 33215

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREESFDQSVRRLKDDDSRFVACNGFDVHYKLLGSGSPPLVVLLHGSFLSIRSWREVIGP
CCCCHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCC
LSRTATVLAFDRPAFGLTSRPVPSPQSEVQYSPEAQSDLIVALMKKLGFDKAILVGNSTG
HHHCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
GTLAMLTALRYPQHVQGIVLAGAMIYSGYATSQMPPFMKPFMKALTPAFSRLMKALITRL
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YDRNIRGFWHVKERLDDATLAAFRQDLMIGDWSRGFWELFLETHHLHLDERLKTLSIPSL
HHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VVTGEQDLTINTEESLRLANELPGAALEVIPDCGHLPQEEAPEAFVAVVESFIGRVRS
EEECCCCEEECCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MREESFDQSVRRLKDDDSRFVACNGFDVHYKLLGSGSPPLVVLLHGSFLSIRSWREVIGP
CCCCHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHCC
LSRTATVLAFDRPAFGLTSRPVPSPQSEVQYSPEAQSDLIVALMKKLGFDKAILVGNSTG
HHHCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
GTLAMLTALRYPQHVQGIVLAGAMIYSGYATSQMPPFMKPFMKALTPAFSRLMKALITRL
CHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
YDRNIRGFWHVKERLDDATLAAFRQDLMIGDWSRGFWELFLETHHLHLDERLKTLSIPSL
HHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VVTGEQDLTINTEESLRLANELPGAALEVIPDCGHLPQEEAPEAFVAVVESFIGRVRS
EEECCCCEEECCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916282; 2670929 [H]