| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194334062
Identifier: 194334062
GI number: 194334062
Start: 1352685
End: 1353152
Strand: Reverse
Name: 194334062
Synonym: Paes_1249
Alternate gene names: NA
Gene position: 1353152-1352685 (Counterclockwise)
Preceding gene: 194334063
Following gene: 194334061
Centisome position: 53.85
GC content: 50.85
Gene sequence:
>468_bases ATGGAAAACAACAGGGCCGGGCGACCAAAAAGCTGTAGAAGAGTGAAGGAGATGCCCAAAGTACGGTGTTTCAAGCCCCA GGGGATCCCCGGAATCAAGCTTGAGGAGATGGTGCTGAGCGTTGATGAGATGGAATCGCTGCGACTGGCTGATCTTGAAG GCTTATATCAGTCAGAGGCGGCTCGGAGGATGGATGTTTCCCGACAGACGTTCGGACGGATTATCGATTCAGCACATCGT AAGGTTGCTGACGCGATCATTCATGGAAAATCAATTGTTATCGAAGGAGGTGTGGTGATGAAAAGAGAAGAACAGGTCCA TAATGCTAAGCCAGGTTGTGTCTGCCAGCATTGCGGCCATGAGGAATCGCACAGGAGCGGACTTCCCTGCAGGGATATGA TTTGCCCTGAATGCGGACATCATATGATTCGAAAGGGCGGATGCGGTACTGGACAGGAGGATATATGA
Upstream 100 bases:
>100_bases AAGACTGACCATTTCAGAGGATTGTTATGTGGCAACCGGCAGCACACAAAACTGCCGGTTGTTTTTTTTGAAAATAATGA GCATATGCTTATAATTTAGC
Downstream 100 bases:
>100_bases ATGATATACAACAACGGTTACGTGCTGCATTGTTATTCCCGTTGGTGTTTGCCGCCATATGGCTGAACGGTTGCAGCAGG GAGCAGGGAGGGCGGCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MENNRAGRPKSCRRVKEMPKVRCFKPQGIPGIKLEEMVLSVDEMESLRLADLEGLYQSEAARRMDVSRQTFGRIIDSAHR KVADAIIHGKSIVIEGGVVMKREEQVHNAKPGCVCQHCGHEESHRSGLPCRDMICPECGHHMIRKGGCGTGQEDI
Sequences:
>Translated_155_residues MENNRAGRPKSCRRVKEMPKVRCFKPQGIPGIKLEEMVLSVDEMESLRLADLEGLYQSEAARRMDVSRQTFGRIIDSAHR KVADAIIHGKSIVIEGGVVMKREEQVHNAKPGCVCQHCGHEESHRSGLPCRDMICPECGHHMIRKGGCGTGQEDI >Mature_155_residues MENNRAGRPKSCRRVKEMPKVRCFKPQGIPGIKLEEMVLSVDEMESLRLADLEGLYQSEAARRMDVSRQTFGRIIDSAHR KVADAIIHGKSIVIEGGVVMKREEQVHNAKPGCVCQHCGHEESHRSGLPCRDMICPECGHHMIRKGGCGTGQEDI
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1249_PROA2 (B4S888)
Other databases:
- EMBL: CP001108 - RefSeq: YP_002015922.1 - GeneID: 6459226 - GenomeReviews: CP001108_GR - KEGG: paa:Paes_1249 - HOGENOM: HBG513201 - OMA: GGKTICI - ProtClustDB: CLSK637532 - HAMAP: MF_00674 - InterPro: IPR002852
Pfam domain/function: PF02001 DUF134
EC number: NA
Molecular weight: Translated: 17303; Mature: 17303
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNRAGRPKSCRRVKEMPKVRCFKPQGIPGIKLEEMVLSVDEMESLRLADLEGLYQSEA CCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRMDVSRQTFGRIIDSAHRKVADAIIHGKSIVIEGGVVMKREEQVHNAKPGCVCQHCGH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECHHHHHHCCCCCCHHHHCCC EESHRSGLPCRDMICPECGHHMIRKGGCGTGQEDI CCHHCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MENNRAGRPKSCRRVKEMPKVRCFKPQGIPGIKLEEMVLSVDEMESLRLADLEGLYQSEA CCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARRMDVSRQTFGRIIDSAHRKVADAIIHGKSIVIEGGVVMKREEQVHNAKPGCVCQHCGH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECHHHHHHCCCCCCHHHHCCC EESHRSGLPCRDMICPECGHHMIRKGGCGTGQEDI CCHHCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA