Click here to switch to the map view.

The map label for this gene is 194334046

Identifier: 194334046

GI number: 194334046

Start: 1340537

End: 1341781

Strand: Reverse

Name: 194334046

Synonym: Paes_1233

Alternate gene names: NA

Gene position: 1341781-1340537 (Counterclockwise)

Preceding gene: 194334047

Following gene: 194334044

Centisome position: 53.4

GC content: 49.16

Gene sequence:

>1245_bases
ATGAACATGAAGAAACGATTTTTCCCACTTACTGTTGCCGCATTTGCAGCAATCGGCAGTTCTTTACTCCCGGCAACTTT
CCTCAACGCCGGATCAAGTCCACCCGGCAATACAGGGCAGGAAGAGAGTCTTACTCAAAAGGCGATGGAAGAGTATGGTC
GGCACTATGCCAATCTCATGCTGGTCGAGCAACACCGCCCTTACGATGAGAAGCTGGTGCAGATCGCTCTCCTGCTGGAT
ACAAGCAACAGTATGGACGGGCTGATCAACCAGGCTAAAAGCCAGTTGTGGCGGATTGTCAATGAACTTTCCAGGGCGCA
TAAGCGGGGGAACGATATACGACTTGAAGTTGCACTTTATGAATACGGCAATGATCGCCTTGCGATGACGGCCGGCTATA
TTCGTCAGGTGACGCCGTTTACCGAAGATCTTGACTGGTTGTCCGAGGCGCTTTTTTCCCTTCAGACAAACGGTGGTTCC
GAGTATTGCGGTCATGTTATCGGGAGCAGTCTTAACCAGTTGGGATGGAACCGGTCGGGAGATGGACTGAAGATGATATT
TATTGCAGGTAATGAGCCTTTTAATCAGGGTTCGGTGAACTACGAGGTTTCCTGCCGCTGGGCTGTCGAGAGAGAGATTG
TTGTGAATACCATCTATTGCGGGCCCTATCAGAGAGGCATTGACACACTCTGGCAGCAAGGTGCCAATAAAGGCGGAGGC
AGTTATTTCGCCATAGACAGTGACAAAGTCCTGAAGGGGATCGTAACGCCTTATGATGATGATCTTCTGAAGCTGAACAG
CGCAATCAATAGTACCTATATCCCGTATGGAAGCAAGGGTGAGCAGAACCTTTCCCGTCAGGCTGAGCAGGATATGAATG
CCTCAAAGCTTTCCCCATCCATTTCTGCGGCAAGAGCCGCTTCAAAAGGTTCGAAACTCTACAAGGCGTCAGACTGGGAT
CTGGTTGACGCCCTTGAAGAAAAGAAAATATCGATTGAAAATATAAGCAGGGATGCTCTGCCGAAAGAGCTGCAGGAGAT
GAGGCCTGAAAATCTTGGCCAGTTCGTTCAGCAGAAAAAAGAGGAGCGTGAAGAGATCAGGCAGAAGATTGCAGCATTAA
GCCGTAAAAGGGATGACTACATCCAGAAGAAAGAACATGAATCGGCAGGGGAGCAGACACTTGGTTCCGCTATTCTCAAG
ACACTCCATACTCAAGCAGAAGCGAAAAACTTCAGGTTCGAGTAG

Upstream 100 bases:

>100_bases
TGAGAGAGCATTGATGCACCTGGGCTTGGCGAAAGCAGGAATCTGAGGCCGATAGCGTCTGATCAGTAGAGCGTTATTGC
CTAACCATCATACGTCACTC

Downstream 100 bases:

>100_bases
TTTTTCGCTTCAGTGACAGACGCCCGCCATGTTGTTTGGGTCATGTGATTGCCAAGCGTCGTTTCTATGGATTTTCGTTC
TCTTTTGTCGCCAGTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MNMKKRFFPLTVAAFAAIGSSLLPATFLNAGSSPPGNTGQEESLTQKAMEEYGRHYANLMLVEQHRPYDEKLVQIALLLD
TSNSMDGLINQAKSQLWRIVNELSRAHKRGNDIRLEVALYEYGNDRLAMTAGYIRQVTPFTEDLDWLSEALFSLQTNGGS
EYCGHVIGSSLNQLGWNRSGDGLKMIFIAGNEPFNQGSVNYEVSCRWAVEREIVVNTIYCGPYQRGIDTLWQQGANKGGG
SYFAIDSDKVLKGIVTPYDDDLLKLNSAINSTYIPYGSKGEQNLSRQAEQDMNASKLSPSISAARAASKGSKLYKASDWD
LVDALEEKKISIENISRDALPKELQEMRPENLGQFVQQKKEEREEIRQKIAALSRKRDDYIQKKEHESAGEQTLGSAILK
TLHTQAEAKNFRFE

Sequences:

>Translated_414_residues
MNMKKRFFPLTVAAFAAIGSSLLPATFLNAGSSPPGNTGQEESLTQKAMEEYGRHYANLMLVEQHRPYDEKLVQIALLLD
TSNSMDGLINQAKSQLWRIVNELSRAHKRGNDIRLEVALYEYGNDRLAMTAGYIRQVTPFTEDLDWLSEALFSLQTNGGS
EYCGHVIGSSLNQLGWNRSGDGLKMIFIAGNEPFNQGSVNYEVSCRWAVEREIVVNTIYCGPYQRGIDTLWQQGANKGGG
SYFAIDSDKVLKGIVTPYDDDLLKLNSAINSTYIPYGSKGEQNLSRQAEQDMNASKLSPSISAARAASKGSKLYKASDWD
LVDALEEKKISIENISRDALPKELQEMRPENLGQFVQQKKEEREEIRQKIAALSRKRDDYIQKKEHESAGEQTLGSAILK
TLHTQAEAKNFRFE
>Mature_414_residues
MNMKKRFFPLTVAAFAAIGSSLLPATFLNAGSSPPGNTGQEESLTQKAMEEYGRHYANLMLVEQHRPYDEKLVQIALLLD
TSNSMDGLINQAKSQLWRIVNELSRAHKRGNDIRLEVALYEYGNDRLAMTAGYIRQVTPFTEDLDWLSEALFSLQTNGGS
EYCGHVIGSSLNQLGWNRSGDGLKMIFIAGNEPFNQGSVNYEVSCRWAVEREIVVNTIYCGPYQRGIDTLWQQGANKGGG
SYFAIDSDKVLKGIVTPYDDDLLKLNSAINSTYIPYGSKGEQNLSRQAEQDMNASKLSPSISAARAASKGSKLYKASDWD
LVDALEEKKISIENISRDALPKELQEMRPENLGQFVQQKKEEREEIRQKIAALSRKRDDYIQKKEHESAGEQTLGSAILK
TLHTQAEAKNFRFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46340; Mature: 46340

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMKKRFFPLTVAAFAAIGSSLLPATFLNAGSSPPGNTGQEESLTQKAMEEYGRHYANLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
LVEQHRPYDEKLVQIALLLDTSNSMDGLINQAKSQLWRIVNELSRAHKRGNDIRLEVALY
EEECCCCHHHHHHEEHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
EYGNDRLAMTAGYIRQVTPFTEDLDWLSEALFSLQTNGGSEYCGHVIGSSLNQLGWNRSG
EECCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
DGLKMIFIAGNEPFNQGSVNYEVSCRWAVEREIVVNTIYCGPYQRGIDTLWQQGANKGGG
CCEEEEEEECCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCC
SYFAIDSDKVLKGIVTPYDDDLLKLNSAINSTYIPYGSKGEQNLSRQAEQDMNASKLSPS
EEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCC
ISAARAASKGSKLYKASDWDLVDALEEKKISIENISRDALPKELQEMRPENLGQFVQQKK
HHHHHHHHCCCCEEECCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
EEREEIRQKIAALSRKRDDYIQKKEHESAGEQTLGSAILKTLHTQAEAKNFRFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNMKKRFFPLTVAAFAAIGSSLLPATFLNAGSSPPGNTGQEESLTQKAMEEYGRHYANLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEE
LVEQHRPYDEKLVQIALLLDTSNSMDGLINQAKSQLWRIVNELSRAHKRGNDIRLEVALY
EEECCCCHHHHHHEEHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
EYGNDRLAMTAGYIRQVTPFTEDLDWLSEALFSLQTNGGSEYCGHVIGSSLNQLGWNRSG
EECCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC
DGLKMIFIAGNEPFNQGSVNYEVSCRWAVEREIVVNTIYCGPYQRGIDTLWQQGANKGGG
CCEEEEEEECCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCHHHHHHHHHHCCCCCCCC
SYFAIDSDKVLKGIVTPYDDDLLKLNSAINSTYIPYGSKGEQNLSRQAEQDMNASKLSPS
EEEEECCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCC
ISAARAASKGSKLYKASDWDLVDALEEKKISIENISRDALPKELQEMRPENLGQFVQQKK
HHHHHHHHCCCCEEECCCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
EEREEIRQKIAALSRKRDDYIQKKEHESAGEQTLGSAILKTLHTQAEAKNFRFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA