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The map label for this gene is csmI [H]

Identifier: 194333970

GI number: 194333970

Start: 1255974

End: 1257044

Strand: Reverse

Name: csmI [H]

Synonym: Paes_1154

Alternate gene names: 194333970

Gene position: 1257044-1255974 (Counterclockwise)

Preceding gene: 194333972

Following gene: 194333969

Centisome position: 50.02

GC content: 50.61

Gene sequence:

>1071_bases
ATGAACGTTATTATCAATGACAAATCCTGCATTGCATCCATTGGCGAGAAATTGTCGAGAGTTGCGCAGGAGAATCAGTG
CCATGTGGGCTATGTGTGCGGAGGTCATGGCGTATGCCAGACGTGCTACGTGACTGTTCTTGAGGGTGAGGATTGCCTGT
CGGATCTGAGCGATATCGAACGGGCCTTCCTTTCAGAGAAGCAGATTGCAGGCGGAGGAAGATTGGCCTGTCAGACAACC
ATTGAAAAAGAGGGGACGATCAGGGTGCTTTCCCGACCCGAAGAGATTCGCAGGATGCTGTTGCAGAACCCTCTCTCCCT
TTTCAGCTATGGAGCACAGATGGGCAAGGCCGCAGCTGAGCGCTTCATTCCCGGTGTTTCAAACGTTATCGACCGGATTC
GAAACGGGGAGATGAACAATCGGGAGAATCTGGGAGATCTTCTTGAAGGAATGGGGTTTGCCATCAAGTTCGGCGCTTCG
ACCGCGGCAGATAACATCCCTTTCAAGGATCAGTTCAATGCTCTGCTGGAACTGATACAGCGTTTTGCGCCATTTTCTCT
TCCTGGAACCGAGCCGGCATCACCTTCGCTTGAGCGAGTCAGTCTCACTGTCAGCGGTTCCGAACCTCAGCAGGTTACTA
TCCCGGTCAAAGCCTCAAAAATCGTTGCTGTGCCATCTTCCGAACTTGAGGCTCTTGGTTTCAGAAAGGCTGATCGCATG
AACAAGGCGGGTCTGATGACTACAGCCGATCTTCTTGCAAAAGGTCAGTCGCCCCAAGGGCGCAAGATGCTTGCACTTGA
GCTGGAACTCGATGAGAAGGAAGTGCTGTCGATCATCAATTGCGCCGATCTTTGTCGGATAGAGGGAATCGATATGAAGA
TCGCCGGTCTTCTCGAAGCTTCGGGCGTTGATACAGTCCCCGAACTTTCGCATAGAAACCCTCATCATCTTCACTCGAAA
ATTCAGGAGGTCAACCTGAAAGAAAAAATTCTGGTATCTCTGCCATCACTCTCTGATCTCGAAACATGGATTGCCGAAGC
TAAAAAGCTTCCCAGAGTGATGACCTATTAA

Upstream 100 bases:

>100_bases
GCAAAAATGTCACTGTATTTTGCTAACTTTTTTAATACAGCATATCAACTATGCCGGTCATGATCGGCAATCCGGGTAAA
CGACTATAATACAGTGAGCT

Downstream 100 bases:

>100_bases
ATTCTGGTATTTTTTTCGTTGTTCTTTGCGACAGGCTGAAGCGCTGTCGCTTTTTTTTGCTTTTTTAGCAAAGTACTTTA
CAATGTAAAGTTTACTCCAG

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MNVIINDKSCIASIGEKLSRVAQENQCHVGYVCGGHGVCQTCYVTVLEGEDCLSDLSDIERAFLSEKQIAGGGRLACQTT
IEKEGTIRVLSRPEEIRRMLLQNPLSLFSYGAQMGKAAAERFIPGVSNVIDRIRNGEMNNRENLGDLLEGMGFAIKFGAS
TAADNIPFKDQFNALLELIQRFAPFSLPGTEPASPSLERVSLTVSGSEPQQVTIPVKASKIVAVPSSELEALGFRKADRM
NKAGLMTTADLLAKGQSPQGRKMLALELELDEKEVLSIINCADLCRIEGIDMKIAGLLEASGVDTVPELSHRNPHHLHSK
IQEVNLKEKILVSLPSLSDLETWIAEAKKLPRVMTY

Sequences:

>Translated_356_residues
MNVIINDKSCIASIGEKLSRVAQENQCHVGYVCGGHGVCQTCYVTVLEGEDCLSDLSDIERAFLSEKQIAGGGRLACQTT
IEKEGTIRVLSRPEEIRRMLLQNPLSLFSYGAQMGKAAAERFIPGVSNVIDRIRNGEMNNRENLGDLLEGMGFAIKFGAS
TAADNIPFKDQFNALLELIQRFAPFSLPGTEPASPSLERVSLTVSGSEPQQVTIPVKASKIVAVPSSELEALGFRKADRM
NKAGLMTTADLLAKGQSPQGRKMLALELELDEKEVLSIINCADLCRIEGIDMKIAGLLEASGVDTVPELSHRNPHHLHSK
IQEVNLKEKILVSLPSLSDLETWIAEAKKLPRVMTY
>Mature_356_residues
MNVIINDKSCIASIGEKLSRVAQENQCHVGYVCGGHGVCQTCYVTVLEGEDCLSDLSDIERAFLSEKQIAGGGRLACQTT
IEKEGTIRVLSRPEEIRRMLLQNPLSLFSYGAQMGKAAAERFIPGVSNVIDRIRNGEMNNRENLGDLLEGMGFAIKFGAS
TAADNIPFKDQFNALLELIQRFAPFSLPGTEPASPSLERVSLTVSGSEPQQVTIPVKASKIVAVPSSELEALGFRKADRM
NKAGLMTTADLLAKGQSPQGRKMLALELELDEKEVLSIINCADLCRIEGIDMKIAGLLEASGVDTVPELSHRNPHHLHSK
IQEVNLKEKILVSLPSLSDLETWIAEAKKLPRVMTY

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 38816; Mature: 38816

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIINDKSCIASIGEKLSRVAQENQCHVGYVCGGHGVCQTCYVTVLEGEDCLSDLSDIE
CEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHEEEEECCHHHHHHHHHHH
RAFLSEKQIAGGGRLACQTTIEKEGTIRVLSRPEEIRRMLLQNPLSLFSYGAQMGKAAAE
HHHHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
RFIPGVSNVIDRIRNGEMNNRENLGDLLEGMGFAIKFGASTAADNIPFKDQFNALLELIQ
HHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
RFAPFSLPGTEPASPSLERVSLTVSGSEPQQVTIPVKASKIVAVPSSELEALGFRKADRM
HHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEECCCHHHHHHCCHHHHHC
NKAGLMTTADLLAKGQSPQGRKMLALELELDEKEVLSIINCADLCRIEGIDMKIAGLLEA
CCCCCHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHC
SGVDTVPELSHRNPHHLHSKIQEVNLKEKILVSLPSLSDLETWIAEAKKLPRVMTY
CCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHCCHHCCC
>Mature Secondary Structure
MNVIINDKSCIASIGEKLSRVAQENQCHVGYVCGGHGVCQTCYVTVLEGEDCLSDLSDIE
CEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHEEEEECCHHHHHHHHHHH
RAFLSEKQIAGGGRLACQTTIEKEGTIRVLSRPEEIRRMLLQNPLSLFSYGAQMGKAAAE
HHHHHHHHCCCCCCEEEEEECCCCCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHH
RFIPGVSNVIDRIRNGEMNNRENLGDLLEGMGFAIKFGASTAADNIPFKDQFNALLELIQ
HHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH
RFAPFSLPGTEPASPSLERVSLTVSGSEPQQVTIPVKASKIVAVPSSELEALGFRKADRM
HHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEECCEEEECCCHHHHHHCCHHHHHC
NKAGLMTTADLLAKGQSPQGRKMLALELELDEKEVLSIINCADLCRIEGIDMKIAGLLEA
CCCCCHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHC
SGVDTVPELSHRNPHHLHSKIQEVNLKEKILVSLPSLSDLETWIAEAKKLPRVMTY
CCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHEECCCHHHHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901 [H]