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The map label for this gene is ybjY [C]

Identifier: 194333960

GI number: 194333960

Start: 1247721

End: 1248686

Strand: Reverse

Name: ybjY [C]

Synonym: Paes_1144

Alternate gene names: 194333960

Gene position: 1248686-1247721 (Counterclockwise)

Preceding gene: 194333961

Following gene: 194333959

Centisome position: 49.69

GC content: 53.42

Gene sequence:

>966_bases
ATGAATAAGAAACCTCTCATCATCGCGCTTGTCGTTCTGTTGGTTTCCGGTGCGGCAACTGGAGTCTGGTTCATGGTGTT
GAGCAAGAAGGAGCCGTCAGCCGAGTTTCGGTCTGTCACGGCGATAACAGGAACGATCGATGAAACGGTATCGACCACCG
GCGTTGTCGAACCCCGCAACCGGCTCAAAATCCAGTCATCCATCGCAGGGCGTGTCGAGGAGATTCTTGTCAGCGAGGGT
GATATGGTCAATCAGGGTGAACAACTTGCTCTTGTGAGTTCAACCGAGCGCGCAGCACTGCTCGATGCCGCAAGGCTTCA
GGACCCCGGCGAGCAGGCGTATTGGGAAAGGGTCTACAAAAAAACAGTGATCCTTTCGCCTATCGACGCTCAGATTATTG
TCAGGAGTATCGAACCCGGGCAGACGGTGACAACGAGCGATTCGCTTTTTGTTCTTTCCGACCGCCTGATTGTCAAAGCC
TATGTCGACGAAACCGATATCGGCCGGATCGCCATCGGCCAGAAAGCCGACATCAGCCTCGATGCCTACCCTGATATCCG
GGTGGGTGGAACGGTAGAGCATATTGACTATGAATCTCATCTTGAGAGCAACGTCAATATCTACTATGTCGATATCATTC
CCGAAACAATTCCCGATGTTTTCCGTTCAGGTATGAGTGCTGATATCGGGATTACAGTTCAGGAAAAGCAGAACGCGGTT
CTTCTGCCGATCGAAGCGGTGCAGACGGTTGATGGTATGACGGTCGTGCTTGGTGCGAGCGCCGACGGCATGAGCCCGGC
CTCTTATAAGCCGGTGACGACCGGCCTTCAGGATGAGGAGCATGTCGAGATTGTCGATGGGCTTCAGGCCGGAGATATCG
TTCTTTTGTCCGGCGGTTCCTTTGCGCTTCCTGTCAGTAATGGCGGCGGATCGAGTCCGTTCATTCCCCAACGAAGAAAA
CGATAG

Upstream 100 bases:

>100_bases
GAGGATAATCTTGTGAGTTCAAAAAAATCATATCTCAATGCCGAGGCGGAACTTCTGCTTGCCGAGGCCCAGTGGATGAA
GGCAAAAGGAGTGACATTGC

Downstream 100 bases:

>100_bases
CGCAGCATGATCGAGCTGAAAGACATCTACCGGACCTATCAGATCGGGGAAAGTCCTGTCCGTGCGCTCAGAGGCGTTTC
CCTCTCTGTATGCAAGGGAG

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; HlyD Family Secretion Protein; Membrane Fusion Protein; Efflux Transporter Rnd Family Mfp Subunit; Membrane-Fusion Protein; Periplasmic Component Of Efflux System; Efflux Transporter; Biotin/Lipoyl Attachment Domain-Containing Protein; Macrolide-Specific Efflux Protein; RND Efflux Membrane Fusion Protein; Permease; Type I Secretion Membrane-Fusion Protein EtsA; Secretion Protein Hlyd; ABC-Type Macrolide Exporter Membrane Component; Transmembrane Efflux Protein; Macrolide-Specific Efflux Protein MacA; Membrane Permease Cation Efflux Pumps; Protein Secretion Protein HylD Family; RND Family Efflux Transporter Subunit MFP; Macrolide-Specific Efflux Protein Maca; PAS/PAC Sensor Protein; Multidrug Efflux System Transmembrane Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MNKKPLIIALVVLLVSGAATGVWFMVLSKKEPSAEFRSVTAITGTIDETVSTTGVVEPRNRLKIQSSIAGRVEEILVSEG
DMVNQGEQLALVSSTERAALLDAARLQDPGEQAYWERVYKKTVILSPIDAQIIVRSIEPGQTVTTSDSLFVLSDRLIVKA
YVDETDIGRIAIGQKADISLDAYPDIRVGGTVEHIDYESHLESNVNIYYVDIIPETIPDVFRSGMSADIGITVQEKQNAV
LLPIEAVQTVDGMTVVLGASADGMSPASYKPVTTGLQDEEHVEIVDGLQAGDIVLLSGGSFALPVSNGGGSSPFIPQRRK
R

Sequences:

>Translated_321_residues
MNKKPLIIALVVLLVSGAATGVWFMVLSKKEPSAEFRSVTAITGTIDETVSTTGVVEPRNRLKIQSSIAGRVEEILVSEG
DMVNQGEQLALVSSTERAALLDAARLQDPGEQAYWERVYKKTVILSPIDAQIIVRSIEPGQTVTTSDSLFVLSDRLIVKA
YVDETDIGRIAIGQKADISLDAYPDIRVGGTVEHIDYESHLESNVNIYYVDIIPETIPDVFRSGMSADIGITVQEKQNAV
LLPIEAVQTVDGMTVVLGASADGMSPASYKPVTTGLQDEEHVEIVDGLQAGDIVLLSGGSFALPVSNGGGSSPFIPQRRK
R
>Mature_321_residues
MNKKPLIIALVVLLVSGAATGVWFMVLSKKEPSAEFRSVTAITGTIDETVSTTGVVEPRNRLKIQSSIAGRVEEILVSEG
DMVNQGEQLALVSSTERAALLDAARLQDPGEQAYWERVYKKTVILSPIDAQIIVRSIEPGQTVTTSDSLFVLSDRLIVKA
YVDETDIGRIAIGQKADISLDAYPDIRVGGTVEHIDYESHLESNVNIYYVDIIPETIPDVFRSGMSADIGITVQEKQNAV
LLPIEAVQTVDGMTVVLGASADGMSPASYKPVTTGLQDEEHVEIVDGLQAGDIVLLSGGSFALPVSNGGGSSPFIPQRRK
R

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34479; Mature: 34479

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKPLIIALVVLLVSGAATGVWFMVLSKKEPSAEFRSVTAITGTIDETVSTTGVVEPRN
CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHEEEEEECCHHHHHCCCCEECCHH
RLKIQSSIAGRVEEILVSEGDMVNQGEQLALVSSTERAALLDAARLQDPGEQAYWERVYK
HEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHH
KTVILSPIDAQIIVRSIEPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRIAIGQKADISL
HEEEECCCCCEEEEEECCCCCEEECCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCEE
DAYPDIRVGGTVEHIDYESHLESNVNIYYVDIIPETIPDVFRSGMSADIGITVQEKQNAV
ECCCCEEECCEEEECCCHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCEE
LLPIEAVQTVDGMTVVLGASADGMSPASYKPVTTGLQDEEHVEIVDGLQAGDIVLLSGGS
EEEHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCC
FALPVSNGGGSSPFIPQRRKR
EEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNKKPLIIALVVLLVSGAATGVWFMVLSKKEPSAEFRSVTAITGTIDETVSTTGVVEPRN
CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHEEEEEECCHHHHHCCCCEECCHH
RLKIQSSIAGRVEEILVSEGDMVNQGEQLALVSSTERAALLDAARLQDPGEQAYWERVYK
HEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHH
KTVILSPIDAQIIVRSIEPGQTVTTSDSLFVLSDRLIVKAYVDETDIGRIAIGQKADISL
HEEEECCCCCEEEEEECCCCCEEECCCCEEEEECCEEEEEECCCCCCCEEEECCCCCCEE
DAYPDIRVGGTVEHIDYESHLESNVNIYYVDIIPETIPDVFRSGMSADIGITVQEKQNAV
ECCCCEEECCEEEECCCHHHHCCCCEEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCEE
LLPIEAVQTVDGMTVVLGASADGMSPASYKPVTTGLQDEEHVEIVDGLQAGDIVLLSGGS
EEEHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCC
FALPVSNGGGSSPFIPQRRKR
EEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA