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The map label for this gene is 194333945

Identifier: 194333945

GI number: 194333945

Start: 1232464

End: 1232868

Strand: Reverse

Name: 194333945

Synonym: Paes_1126

Alternate gene names: NA

Gene position: 1232868-1232464 (Counterclockwise)

Preceding gene: 194333946

Following gene: 194333944

Centisome position: 49.06

GC content: 50.37

Gene sequence:

>405_bases
ATGCTGAAAGACGCTCTGGGAAATTACAGGGGTACGCTTAGCGATGTGAACCGTATCATCTTGCGCAATCAGGATAATGC
GTTGGCCTGGTATGACCGGGGGAACCTGAAGCACAGTGCAGGCGATGATGAAGGGGCGATAGACGATTACACCGAAGCCC
TGCGTATAGGGCTCCGAAAACGGGAGGAACTTCATGCTTTGGGCAACAGGGCAATGGCATTGGCAACGCTCGGCCGATAC
GAAGAAGCTATAATGGATTGCACCAGCATTATTGATGCCCTTCCAAAAAACAAGAGCTTGCTGAGAACCGCTCATCTCAG
AAGAGCGGAACTCAATAAGAGAACAGGCAATGCACAAGCAGCTCGTCTGGATAGTCAGGCGGCTGAACAGTTAACACTAA
GATAA

Upstream 100 bases:

>100_bases
CCGTGCCGGTCAGGCGCGTCATGATGAGTGTCCGTGGTGAGGTTTTGCTTGAAGAAACACGGAATTGCGAAACGGCAGGC
GCCCCTGAAGAGAGACCTCG

Downstream 100 bases:

>100_bases
CAGGAGAATCCAATGGGAATGTATTGTGATCAGTGCCAGGAAAGCGTGAAAGGCACAGGATGTATTGCAAGAGGCGTGTG
CGGAAAAAACGAAGTCACTG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLKDALGNYRGTLSDVNRIILRNQDNALAWYDRGNLKHSAGDDEGAIDDYTEALRIGLRKREELHALGNRAMALATLGRY
EEAIMDCTSIIDALPKNKSLLRTAHLRRAELNKRTGNAQAARLDSQAAEQLTLR

Sequences:

>Translated_134_residues
MLKDALGNYRGTLSDVNRIILRNQDNALAWYDRGNLKHSAGDDEGAIDDYTEALRIGLRKREELHALGNRAMALATLGRY
EEAIMDCTSIIDALPKNKSLLRTAHLRRAELNKRTGNAQAARLDSQAAEQLTLR
>Mature_134_residues
MLKDALGNYRGTLSDVNRIILRNQDNALAWYDRGNLKHSAGDDEGAIDDYTEALRIGLRKREELHALGNRAMALATLGRY
EEAIMDCTSIIDALPKNKSLLRTAHLRRAELNKRTGNAQAARLDSQAAEQLTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14974; Mature: 14974

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKDALGNYRGTLSDVNRIILRNQDNALAWYDRGNLKHSAGDDEGAIDDYTEALRIGLRK
CCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
REELHALGNRAMALATLGRYEEAIMDCTSIIDALPKNKSLLRTAHLRRAELNKRTGNAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
ARLDSQAAEQLTLR
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLKDALGNYRGTLSDVNRIILRNQDNALAWYDRGNLKHSAGDDEGAIDDYTEALRIGLRK
CCCCHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
REELHALGNRAMALATLGRYEEAIMDCTSIIDALPKNKSLLRTAHLRRAELNKRTGNAQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH
ARLDSQAAEQLTLR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA