| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194333932
Identifier: 194333932
GI number: 194333932
Start: 1221571
End: 1222134
Strand: Reverse
Name: 194333932
Synonym: Paes_1112
Alternate gene names: NA
Gene position: 1222134-1221571 (Counterclockwise)
Preceding gene: 194333933
Following gene: 194333931
Centisome position: 48.63
GC content: 47.34
Gene sequence:
>564_bases ATGAAGAAGATTACCAAAAAGATCAGTACAGCCACAGATCGCTCCACAGCAATAAACGCCGTTAAAAACCGATCCGGAAG TCAACTCCTTCGTTTTCCTGCAGTTCCTGTCCCGGTTCAATTTTTTATCTCGTTAGCCGGTTTTCTTTTTCTTCTGAATT TCCTCTGGGAATCGTTGCACGGTCTTCTCTACCTCGACCATCAGGTCATGCCGGCGGGCAGCTATGTGCCGATGATGCTG GAGATGGCAGGGTATGACACACTGGCTGTTTCGGCTTTCTACCTGTTCATTTCCCGATTGAACAACACACTTCTCTGGCC GTTAACCCTTATCAATATCAGCATCTTTTCATTGATCGCTCTGCTCATGGCCTATGGAACGGAATATAGTGCTGTTCACA TCCTGCATCAATGGGACTATCGTCCATCCATGCCGACAGTGTTGGGCGTCGGCCTTTTTCCGCTTTTTCAACTTACAGCA ACAGGTCTGCTTGCGATGTTTTTTTCAGGAAAAATAGCATCTGTCGAAATACCCAAACCGACGGCAATACCGCAACGCCG GTAA
Upstream 100 bases:
>100_bases CAAAAAACCAGATAACGACAATCGGCAAACATACCTTCTATCTGTGATCTGAACCGGACTGACATAGTGCTCATTCCGGC TACAAAGCAACGGGTCTGTC
Downstream 100 bases:
>100_bases TGCTTCTGAAAAATATCCTCTTTCCGGTTCTTCAGAACCCGCCCAATCAGGGCTGAAGGAAATCCATTAAGACTTTAATC TTTAATGCGTTAGCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKKITKKISTATDRSTAINAVKNRSGSQLLRFPAVPVPVQFFISLAGFLFLLNFLWESLHGLLYLDHQVMPAGSYVPMML EMAGYDTLAVSAFYLFISRLNNTLLWPLTLINISIFSLIALLMAYGTEYSAVHILHQWDYRPSMPTVLGVGLFPLFQLTA TGLLAMFFSGKIASVEIPKPTAIPQRR
Sequences:
>Translated_187_residues MKKITKKISTATDRSTAINAVKNRSGSQLLRFPAVPVPVQFFISLAGFLFLLNFLWESLHGLLYLDHQVMPAGSYVPMML EMAGYDTLAVSAFYLFISRLNNTLLWPLTLINISIFSLIALLMAYGTEYSAVHILHQWDYRPSMPTVLGVGLFPLFQLTA TGLLAMFFSGKIASVEIPKPTAIPQRR >Mature_187_residues MKKITKKISTATDRSTAINAVKNRSGSQLLRFPAVPVPVQFFISLAGFLFLLNFLWESLHGLLYLDHQVMPAGSYVPMML EMAGYDTLAVSAFYLFISRLNNTLLWPLTLINISIFSLIALLMAYGTEYSAVHILHQWDYRPSMPTVLGVGLFPLFQLTA TGLLAMFFSGKIASVEIPKPTAIPQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20887; Mature: 20887
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKITKKISTATDRSTAINAVKNRSGSQLLRFPAVPVPVQFFISLAGFLFLLNFLWESLH CCHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLYLDHQVMPAGSYVPMMLEMAGYDTLAVSAFYLFISRLNNTLLWPLTLINISIFSLIA HHEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLMAYGTEYSAVHILHQWDYRPSMPTVLGVGLFPLFQLTATGLLAMFFSGKIASVEIPKP HHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC TAIPQRR CCCCCCC >Mature Secondary Structure MKKITKKISTATDRSTAINAVKNRSGSQLLRFPAVPVPVQFFISLAGFLFLLNFLWESLH CCHHHHHHHHHCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLLYLDHQVMPAGSYVPMMLEMAGYDTLAVSAFYLFISRLNNTLLWPLTLINISIFSLIA HHEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LLMAYGTEYSAVHILHQWDYRPSMPTVLGVGLFPLFQLTATGLLAMFFSGKIASVEIPKP HHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC TAIPQRR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA