Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194333695

Identifier: 194333695

GI number: 194333695

Start: 943143

End: 943619

Strand: Reverse

Name: 194333695

Synonym: Paes_0862

Alternate gene names: NA

Gene position: 943619-943143 (Counterclockwise)

Preceding gene: 194333706

Following gene: 194333693

Centisome position: 37.55

GC content: 50.31

Gene sequence:

>477_bases
ATGCCGCTGACCCTTACCATGACGATCAGGCGCAGCCTGAAAACCGGGGCATCAGGCACTGCTGTCTTCAGGCTGCTTTC
TGACATTGCCCGTTCGGCATCGTTTTTCCCGAAAATCGAAACGATATCCGACCTTGGCAGCAACACCTGGCGATTTGAAA
CAGAACGCATCGGAATTGGCAGCTATACCATTCTGCAACTAAGCGTTATCAGTCGATACCAGTTCGATAAAGAGCAGGGC
ATCATCAGCTGGGCACCGGCAGGAGCAGCTGAGCACCTCAAAGTAGAAGGACACTGGGAAATCCTGCAGCACCCGGACGG
ATGCCATATTCTACTGACAGCTCAAGGCACTCATGAGATCAATCTTCCGGAATTCATGAAAAACCTTCTGGCCCCCCTTA
TACGGCTCGAAGCTGAGATCCTTGTCAACTGCTTTCTCGACAACCTGAAAAAAAAGCTTGAAGAAGAAAAATCGTGA

Upstream 100 bases:

>100_bases
GGTTTAGGGTTGATGATAAAATCACAAGGAAGATAAGAAAAATGACCAGCAAGAGGAATACTCCGGCAGACAGGACTGAA
CACGTGCAAAAAGGATATCA

Downstream 100 bases:

>100_bases
ATTGATATTCTCAACCCCATCCCAACGCCTTACTGACTTCAGCCTTGAGGCGAGGGTATGCAAGAGCGCCTGAGGTCCTC
CATATAACGGAACCCTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIGSYTILQLSVISRYQFDKEQG
IISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEINLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS

Sequences:

>Translated_158_residues
MPLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIGSYTILQLSVISRYQFDKEQG
IISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEINLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS
>Mature_157_residues
PLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIGSYTILQLSVISRYQFDKEQGI
ISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEINLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17779; Mature: 17648

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIG
CCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECEECCC
SYTILQLSVISRYQFDKEQGIISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEI
CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCCC
NLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIG
CEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECEECCC
SYTILQLSVISRYQFDKEQGIISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEI
CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCCC
NLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA