| Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
|---|---|
| Accession | NC_011059 |
| Length | 2,512,923 |
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The map label for this gene is 194333695
Identifier: 194333695
GI number: 194333695
Start: 943143
End: 943619
Strand: Reverse
Name: 194333695
Synonym: Paes_0862
Alternate gene names: NA
Gene position: 943619-943143 (Counterclockwise)
Preceding gene: 194333706
Following gene: 194333693
Centisome position: 37.55
GC content: 50.31
Gene sequence:
>477_bases ATGCCGCTGACCCTTACCATGACGATCAGGCGCAGCCTGAAAACCGGGGCATCAGGCACTGCTGTCTTCAGGCTGCTTTC TGACATTGCCCGTTCGGCATCGTTTTTCCCGAAAATCGAAACGATATCCGACCTTGGCAGCAACACCTGGCGATTTGAAA CAGAACGCATCGGAATTGGCAGCTATACCATTCTGCAACTAAGCGTTATCAGTCGATACCAGTTCGATAAAGAGCAGGGC ATCATCAGCTGGGCACCGGCAGGAGCAGCTGAGCACCTCAAAGTAGAAGGACACTGGGAAATCCTGCAGCACCCGGACGG ATGCCATATTCTACTGACAGCTCAAGGCACTCATGAGATCAATCTTCCGGAATTCATGAAAAACCTTCTGGCCCCCCTTA TACGGCTCGAAGCTGAGATCCTTGTCAACTGCTTTCTCGACAACCTGAAAAAAAAGCTTGAAGAAGAAAAATCGTGA
Upstream 100 bases:
>100_bases GGTTTAGGGTTGATGATAAAATCACAAGGAAGATAAGAAAAATGACCAGCAAGAGGAATACTCCGGCAGACAGGACTGAA CACGTGCAAAAAGGATATCA
Downstream 100 bases:
>100_bases ATTGATATTCTCAACCCCATCCCAACGCCTTACTGACTTCAGCCTTGAGGCGAGGGTATGCAAGAGCGCCTGAGGTCCTC CATATAACGGAACCCTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIGSYTILQLSVISRYQFDKEQG IISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEINLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS
Sequences:
>Translated_158_residues MPLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIGSYTILQLSVISRYQFDKEQG IISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEINLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS >Mature_157_residues PLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIGSYTILQLSVISRYQFDKEQGI ISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEINLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17779; Mature: 17648
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIG CCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECEECCC SYTILQLSVISRYQFDKEQGIISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEI CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCCC NLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLTLTMTIRRSLKTGASGTAVFRLLSDIARSASFFPKIETISDLGSNTWRFETERIGIG CEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECEECCC SYTILQLSVISRYQFDKEQGIISWAPAGAAEHLKVEGHWEILQHPDGCHILLTAQGTHEI CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCEEECCCCCEEEEEECCCCCC NLPEFMKNLLAPLIRLEAEILVNCFLDNLKKKLEEEKS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA