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The map label for this gene is yloA [H]

Identifier: 194333659

GI number: 194333659

Start: 908662

End: 910278

Strand: Reverse

Name: yloA [H]

Synonym: Paes_0826

Alternate gene names: 194333659

Gene position: 910278-908662 (Counterclockwise)

Preceding gene: 194333667

Following gene: 194333658

Centisome position: 36.22

GC content: 49.29

Gene sequence:

>1617_bases
ATGCATCGCAACTACTTTACCCTCTACCATGCCGCCGGTGAACTCCGAAGCCGTCTTGTCGGAGGATACCTCTTCGAGGT
GTATTCACAAAAGAAAAATGAACTGACAATCGCATTCATTACCAATGACCGGAACCATCTGCAACTGGTCGTGACAACGG
CAAACCCGCGGCTCGGGCTCTGTGTCCGTGAAGGACTGAACAGGAAAAAACGTAATTCAGCAGGGCTCATGCCCGAAATT
TATGAACAGGAGGTGCTTGACTTTCGTATGGACACTGCGGACCGGATCATACACGTCATACTGGAATCAGGCTACAAGCT
TGAACTCCGGCTCTTTACTGGCCGCACCAACGTTGTACTCCTCAACGATGAAAAGAAGATAAGCTCGTTCAAGGAACATA
TTGCCACACCGCCATCACAGTTCAGGCCGGATGTGCTCAAAACACTTGAAAAGCTTGCCTGTAACGAGGAGGTGTTTTGC
AGGGAACTCAGAGCCAATGGCTCCGATACGACAATCAAACGCCTCCAGGCACTCCTTCCGGGTTTCGATCGATTTCTTGT
CCGTACACTTCTTCAAAGAGCCGGAAACCCGGACGACCACCCAACACTGCACATTGAATTCCGCAAGCTGTTTTTTGAGC
TGATCGAACCGCACCCCACCCTCATCATCGATGACAAGGAAGAGCCATTTCTGTCGATTCTTGAAACCCCTGAAAAGAAA
GGAAAATCGTTTGAAACAGTCCTTGAGGCCCTTTCATTCTACTGCAGCAGAACATGGCAATTCCTTGGCGCCACCGGCGA
CATCGGCGACCTGAAACAAGCTCTTCTTGAAGCACAAAAAAAAGCGCAATCAATGATCAGAGGCGCCTCTTCCGAGGAAC
TTGAATCGGCAATTGAACACTCGACCACCATGGGGCACCTCCTGATGTCCAACATCGGCAACCAGTCAAGAAAACCGACA
TCCATTCAGGTTACCAACTTGTTTGACAGCGAATCAGAAACAGTGACAATCCAGCTCAAACCTGAACTGAGTATCCATCA
GAACGCAGAGCGCTATTTCACAAAAGCCGCAAAAACGAGAGGAAAAATAGCCGCAATGCAGCATCGAAAAACAGAAGGTC
AAAGAATTGCGGCCTGCTGCGAACTGCTTCTCGAAAAAGCAGCAACGTTGAAAACCCCTTCAGACCTCCGCAACTTCAAT
GAAACATATACCAGGGAACTCCGGGAGGCAGGAATAAAAAGTCGGAAGAGTAAAAACGGGAAATCTTTTCCATTCAGGAC
AGTAGCCCTCCCCTCGGGAGCAACGCTCTTTCTCGGAAAGAATGCAGCCAATAACGATCTATTGACCTTTTCGTTCGCCA
AACCTCACGACATCTGGCTTCACGCGAGAGGGTCGTCAGGGTCGCATGGCATTCTCAGAGGCTCGTGCATGCAGAACAGA
ACAGATATTCAACGAGCTGCTGAAATCGTAGCATTTCATTCCGCCGCCCGTCACTCGACAATGGTACCGGTGATGTATAC
AGAAAAAAAATATGTCAGAAAATCAGGCTCTCGTCTTCCCGGACAAGTCAGACTCGACCGGGAAGAGGTCATCCTGGTTA
CACCATCCTGCATCTGA

Upstream 100 bases:

>100_bases
CATCAGACATAAACAGGATTTTAATACATTAGAGATTACGCGCATTCCGGATGTAAAATACAGAAAAACCTGAGGCCCCC
GCAACAGCGGCAGACAGAAT

Downstream 100 bases:

>100_bases
ACAAAGAAAAACACCACAAAAACATGGAAAATTACAAACTCGTTCTACCCGAACATCTCAACCATCATGGCTTCCTCTTC
GGCGGAAACCTTCTCAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 538

Protein sequence:

>538_residues
MHRNYFTLYHAAGELRSRLVGGYLFEVYSQKKNELTIAFITNDRNHLQLVVTTANPRLGLCVREGLNRKKRNSAGLMPEI
YEQEVLDFRMDTADRIIHVILESGYKLELRLFTGRTNVVLLNDEKKISSFKEHIATPPSQFRPDVLKTLEKLACNEEVFC
RELRANGSDTTIKRLQALLPGFDRFLVRTLLQRAGNPDDHPTLHIEFRKLFFELIEPHPTLIIDDKEEPFLSILETPEKK
GKSFETVLEALSFYCSRTWQFLGATGDIGDLKQALLEAQKKAQSMIRGASSEELESAIEHSTTMGHLLMSNIGNQSRKPT
SIQVTNLFDSESETVTIQLKPELSIHQNAERYFTKAAKTRGKIAAMQHRKTEGQRIAACCELLLEKAATLKTPSDLRNFN
ETYTRELREAGIKSRKSKNGKSFPFRTVALPSGATLFLGKNAANNDLLTFSFAKPHDIWLHARGSSGSHGILRGSCMQNR
TDIQRAAEIVAFHSAARHSTMVPVMYTEKKYVRKSGSRLPGQVRLDREEVILVTPSCI

Sequences:

>Translated_538_residues
MHRNYFTLYHAAGELRSRLVGGYLFEVYSQKKNELTIAFITNDRNHLQLVVTTANPRLGLCVREGLNRKKRNSAGLMPEI
YEQEVLDFRMDTADRIIHVILESGYKLELRLFTGRTNVVLLNDEKKISSFKEHIATPPSQFRPDVLKTLEKLACNEEVFC
RELRANGSDTTIKRLQALLPGFDRFLVRTLLQRAGNPDDHPTLHIEFRKLFFELIEPHPTLIIDDKEEPFLSILETPEKK
GKSFETVLEALSFYCSRTWQFLGATGDIGDLKQALLEAQKKAQSMIRGASSEELESAIEHSTTMGHLLMSNIGNQSRKPT
SIQVTNLFDSESETVTIQLKPELSIHQNAERYFTKAAKTRGKIAAMQHRKTEGQRIAACCELLLEKAATLKTPSDLRNFN
ETYTRELREAGIKSRKSKNGKSFPFRTVALPSGATLFLGKNAANNDLLTFSFAKPHDIWLHARGSSGSHGILRGSCMQNR
TDIQRAAEIVAFHSAARHSTMVPVMYTEKKYVRKSGSRLPGQVRLDREEVILVTPSCI
>Mature_538_residues
MHRNYFTLYHAAGELRSRLVGGYLFEVYSQKKNELTIAFITNDRNHLQLVVTTANPRLGLCVREGLNRKKRNSAGLMPEI
YEQEVLDFRMDTADRIIHVILESGYKLELRLFTGRTNVVLLNDEKKISSFKEHIATPPSQFRPDVLKTLEKLACNEEVFC
RELRANGSDTTIKRLQALLPGFDRFLVRTLLQRAGNPDDHPTLHIEFRKLFFELIEPHPTLIIDDKEEPFLSILETPEKK
GKSFETVLEALSFYCSRTWQFLGATGDIGDLKQALLEAQKKAQSMIRGASSEELESAIEHSTTMGHLLMSNIGNQSRKPT
SIQVTNLFDSESETVTIQLKPELSIHQNAERYFTKAAKTRGKIAAMQHRKTEGQRIAACCELLLEKAATLKTPSDLRNFN
ETYTRELREAGIKSRKSKNGKSFPFRTVALPSGATLFLGKNAANNDLLTFSFAKPHDIWLHARGSSGSHGILRGSCMQNR
TDIQRAAEIVAFHSAARHSTMVPVMYTEKKYVRKSGSRLPGQVRLDREEVILVTPSCI

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 60878; Mature: 60878

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRNYFTLYHAAGELRSRLVGGYLFEVYSQKKNELTIAFITNDRNHLQLVVTTANPRLGL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCHH
CVREGLNRKKRNSAGLMPEIYEQEVLDFRMDTADRIIHVILESGYKLELRLFTGRTNVVL
HHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCEEEE
LNDEKKISSFKEHIATPPSQFRPDVLKTLEKLACNEEVFCRELRANGSDTTIKRLQALLP
ECCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHC
GFDRFLVRTLLQRAGNPDDHPTLHIEFRKLFFELIEPHPTLIIDDKEEPFLSILETPEKK
CHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCHHC
GKSFETVLEALSFYCSRTWQFLGATGDIGDLKQALLEAQKKAQSMIRGASSEELESAIEH
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
STTMGHLLMSNIGNQSRKPTSIQVTNLFDSESETVTIQLKPELSIHQNAERYFTKAAKTR
HHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
GKIAAMQHRKTEGQRIAACCELLLEKAATLKTPSDLRNFNETYTRELREAGIKSRKSKNG
CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KSFPFRTVALPSGATLFLGKNAANNDLLTFSFAKPHDIWLHARGSSGSHGILRGSCMQNR
CCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEECHHHCCH
TDIQRAAEIVAFHSAARHSTMVPVMYTEKKYVRKSGSRLPGQVRLDREEVILVTPSCI
HHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCEEECCCCEEEECCCCC
>Mature Secondary Structure
MHRNYFTLYHAAGELRSRLVGGYLFEVYSQKKNELTIAFITNDRNHLQLVVTTANPRLGL
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCHH
CVREGLNRKKRNSAGLMPEIYEQEVLDFRMDTADRIIHVILESGYKLELRLFTGRTNVVL
HHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCEEEE
LNDEKKISSFKEHIATPPSQFRPDVLKTLEKLACNEEVFCRELRANGSDTTIKRLQALLP
ECCCHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHC
GFDRFLVRTLLQRAGNPDDHPTLHIEFRKLFFELIEPHPTLIIDDKEEPFLSILETPEKK
CHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCCHHC
GKSFETVLEALSFYCSRTWQFLGATGDIGDLKQALLEAQKKAQSMIRGASSEELESAIEH
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
STTMGHLLMSNIGNQSRKPTSIQVTNLFDSESETVTIQLKPELSIHQNAERYFTKAAKTR
HHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHC
GKIAAMQHRKTEGQRIAACCELLLEKAATLKTPSDLRNFNETYTRELREAGIKSRKSKNG
CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KSFPFRTVALPSGATLFLGKNAANNDLLTFSFAKPHDIWLHARGSSGSHGILRGSCMQNR
CCCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEECHHHCCH
TDIQRAAEIVAFHSAARHSTMVPVMYTEKKYVRKSGSRLPGQVRLDREEVILVTPSCI
HHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCEEECCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]