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The map label for this gene is lipB [H]

Identifier: 193214485

GI number: 193214485

Start: 912428

End: 913207

Strand: Direct

Name: lipB [H]

Synonym: Ctha_0769

Alternate gene names: 193214485

Gene position: 912428-913207 (Clockwise)

Preceding gene: 193214484

Following gene: 193214490

Centisome position: 27.7

GC content: 43.72

Gene sequence:

>780_bases
ATGAAAGTGACTTTTTTAGGAACAGGAACTTCTCAGGGCATTCCGGTTCCGCTTTGCAACTGTGAGATTTGCGCATCCAA
CGACCCACGCGATAAACGCCTTCGCGCTTCGCTTTTTGTCGAAACTGGCCAGAAAAACATTTTAATCGACACATCCGCTG
ATTTCCGACAACAAATGCTTCGCAGTTCGATTCGTAAAATCGACCTGATTTTGCTCACGCATCATCATTTTGACCATCTT
TACGGACTGGACGATATCCGCTCTTTTACCAATGCACACCAACAATTTATCGATGTTTATACCAAACCCGATTGCATTCC
TGAAGTGATGACACGCTTTGGCTATGCGTTTCATCGCGACAATTTGCAAATCGGGCTGCCCGCCTTGCGAATGCACGCTG
TCGTCAAACCGTTTTTTGTTGGGGAAAACAACCATAAAATTACGATTACGCCTGTCGAAGTTGGACACGGACGCTTGGGT
ATTTATGGCTATCGAATTGGAAATATGGCTTACCTAACAGATTGCAAAACAATTCCTGACAAGTCGTTTGACTTGTTAAA
AAACTTGGATGTGCTCATCATCGAAAGTTTGCGCTACCGCCTGCATCCAACTCATGCTAGCCTGATAGAATCGCTGGCTT
TTATAAAAAAAATTTCGCCTAAACGTGCGTATTTAACTCACTTTAGCCATGAACTCAAGCATAGTCGCCTGGATGCAGAA
TTGCCAGAAAATGTCTTCCCTGCACATGACATGTTGGAGCTTTTTATTGATGAGGAGTAA

Upstream 100 bases:

>100_bases
CGCGCTTGCGCAAACCGGAATAGGGAACATTTATATCAACCCGCAGGTTAGAAAAATCATCGATGATGAAGCCGGTGAAA
CTATAAATAGCTAAGTTTAG

Downstream 100 bases:

>100_bases
CGCTCTGCGTTGCAGTTCAGACCGATAGGTTTTTGGTGGGGGAACAAATAAACCTAACTTTTTTTCAACCCTTTCGCACC
TATATCGCGGCGGAAATATG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Lipoate-protein ligase B; Lipoyl/octanoyl transferase; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKVTFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFVETGQKNILIDTSADFRQQMLRSSIRKIDLILLTHHHFDHL
YGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGYAFHRDNLQIGLPALRMHAVVKPFFVGENNHKITITPVEVGHGRLG
IYGYRIGNMAYLTDCKTIPDKSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFSHELKHSRLDAE
LPENVFPAHDMLELFIDEE

Sequences:

>Translated_259_residues
MKVTFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFVETGQKNILIDTSADFRQQMLRSSIRKIDLILLTHHHFDHL
YGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGYAFHRDNLQIGLPALRMHAVVKPFFVGENNHKITITPVEVGHGRLG
IYGYRIGNMAYLTDCKTIPDKSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFSHELKHSRLDAE
LPENVFPAHDMLELFIDEE
>Mature_259_residues
MKVTFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFVETGQKNILIDTSADFRQQMLRSSIRKIDLILLTHHHFDHL
YGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGYAFHRDNLQIGLPALRMHAVVKPFFVGENNHKITITPVEVGHGRLG
IYGYRIGNMAYLTDCKTIPDKSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFSHELKHSRLDAE
LPENVFPAHDMLELFIDEE

Specific function: Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the lipB family [H]

Homologues:

Organism=Escherichia coli, GI1790530, Length=252, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004143
- InterPro:   IPR000544
- InterPro:   IPR020605 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB; PF00753 Lactamase_B [H]

EC number: =2.3.1.181 [H]

Molecular weight: Translated: 29711; Mature: 29711

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFVETGQKNILIDTSADFRQQML
CEEEEEECCCCCCCCEEECCCEEECCCCCHHHHHHHEEEEECCCCEEEEECCHHHHHHHH
RSSIRKIDLILLTHHHFDHLYGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGYAFHRD
HHHHHHEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEECC
NLQIGLPALRMHAVVKPFFVGENNHKITITPVEVGHGRLGIYGYRIGNMAYLTDCKTIPD
CCEECCHHHHHHHHHHHEEECCCCCEEEEEEEEECCCEEEEEEEEECCEEEEECCCCCCC
KSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFSHELKHSRLDAE
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
LPENVFPAHDMLELFIDEE
CCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MKVTFLGTGTSQGIPVPLCNCEICASNDPRDKRLRASLFVETGQKNILIDTSADFRQQML
CEEEEEECCCCCCCCEEECCCEEECCCCCHHHHHHHEEEEECCCCEEEEECCHHHHHHHH
RSSIRKIDLILLTHHHFDHLYGLDDIRSFTNAHQQFIDVYTKPDCIPEVMTRFGYAFHRD
HHHHHHEEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEECC
NLQIGLPALRMHAVVKPFFVGENNHKITITPVEVGHGRLGIYGYRIGNMAYLTDCKTIPD
CCEECCHHHHHHHHHHHEEECCCCCEEEEEEEEECCCEEEEEEEEECCEEEEECCCCCCC
KSFDLLKNLDVLIIESLRYRLHPTHASLIESLAFIKKISPKRAYLTHFSHELKHSRLDAE
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
LPENVFPAHDMLELFIDEE
CCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12949112 [H]