| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214479
Identifier: 193214479
GI number: 193214479
Start: 897204
End: 898742
Strand: Direct
Name: 193214479
Synonym: Ctha_0762
Alternate gene names: NA
Gene position: 897204-898742 (Clockwise)
Preceding gene: 193214478
Following gene: 193214480
Centisome position: 27.24
GC content: 41.07
Gene sequence:
>1539_bases ATGTTTTTTAAAAAAATTACCGCTTTAGTTTATCTACTTACCTGTTTTTACACTTTATCTTTTGCGCAACTTAAAGGAAG TCTTTCTGGTGGAATGGTTGGAAGTCCCAAAATGGTGTATTTAGCCGACATTCTAAAAATGAACGATCAAGTCCGTTCAG GCGGAAGTGGAACAACATCGCTTGATCTGTTCCGTGTCACGATCCAAAACAACACAGAGAAAGAAAAATTAGCCTATGTA CTCGAATTTTTCAAAGATGGTGAATTGCTGGTTGAGGGAGGATCTTCATTTATATATACGAAAAGCTTTACGATTACAAA CAATAACGTAAAGAACAGCCCTTACCGACTACGGAGCTTTGAACTAAATAAAGAAATTGTTGAAAAAATAACCGGACAAA GTTATAGCAGATTTGGCTCAGACGTCAATGTGCCTACATATATGCCATCTGGTGTTTACACCTTTAAAATGTGGCTGAAA GACGCAAATGGTAATGTAGCTTCAAACGTTATACTGGCAGTTCTAACCATTACCAATCCCACAGGTTATGTTACGTTACT AAGTCCTGGGAATCCCGTTGGCTTTGGAACACCGGAATCCATTAACAATCCGCTGCCTTTTTTCCAATGGCAAGGCGATG CTCAAGAGTATATCATTGAAGTTTATGAGCAAGTAGAAGGCCGACAAAGCACTTTTACAGAGGCAATTGGCAATACGCCG CATTTTAAAAAATCCGGCATTCTTTCTACATCTATTCAATTTGATGGCGGAAGTGGAACCAGAACGTTTACTTCGGGAAA TACCTATTACTGGCGAGTTACTTCGGTTATAGAAATTGGCGGTCGCATCACACAGAAAAAAACTCAGTCTGAGCCATTTG CCTTTATTTATGTTGCGCCTGGGGACAACATTGCCAGTACGTTGCCCACCGATGATTTTTCATTTGACGACTCCGCTGAT GAAAGTTCGGAGGAAAGCTCCGATGAATCTTCCGATGAAAGCTCCGATGAAAGCTCCGACGAAAGTTCGGAGGAAAGCTC CGACGAAAGTTCGGAGGAAAGCTCCGACGAAAGTTCGGACGAAAGCTCGGAGGAAAGCTCCGATGAAAGCTCTGATGAAT CTTCTGACGAAAGTTCGGAGGAAAGCTCCGATGAATCTTCTGACGAAAGCTCGGAGGAAAGCTCCGATGAATCTTCTGAC GAAAGCTCGGAGGAAAGCTCCGATGAATCTTCTGATGAATCTTCTGACGAAAGTTCGGAGGAACAATCAAATAATGCAAA ATTGGCCAAAAAGCTCCTTAAAGTAAAAGAAATACTTGGGTCGTTAGGGATTAATGCAAAGTGGCTTACAGACAAAAAAA TATCGTTCGAAAGTTTCAGTGGAAAAATATCATTTCGTGACCCGAGCAATTCAAACAAAACAATTCCGCAAACCTACATA GAAAACACAAACATAGACGACTTAATCGAAGCACTCAATCAATTGCTTGCAAATAAAGGCCTCTCAACAAAAGCTTCTGC TGAGAAGCAAACTATGTGA
Upstream 100 bases:
>100_bases GCTATTTGTTTCCGTTAAGCTCAAACCCGCTAACTTAACTTTCCGCAGCCATGTTTTTTTTTAACTAAAACCCACCGATG CCCAAACAAAGGAGGCGATT
Downstream 100 bases:
>100_bases ATCTAAGTTATTAAATATGAAAGCGCCCATGAGTTCTCTCATCGGCGCTTTTGTTTGTTTACACGCCGCTAAAAAATTGA AAATGGATTTATCTGATAAA
Product: cobalamin biosynthesis protein CobT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MFFKKITALVYLLTCFYTLSFAQLKGSLSGGMVGSPKMVYLADILKMNDQVRSGGSGTTSLDLFRVTIQNNTEKEKLAYV LEFFKDGELLVEGGSSFIYTKSFTITNNNVKNSPYRLRSFELNKEIVEKITGQSYSRFGSDVNVPTYMPSGVYTFKMWLK DANGNVASNVILAVLTITNPTGYVTLLSPGNPVGFGTPESINNPLPFFQWQGDAQEYIIEVYEQVEGRQSTFTEAIGNTP HFKKSGILSTSIQFDGGSGTRTFTSGNTYYWRVTSVIEIGGRITQKKTQSEPFAFIYVAPGDNIASTLPTDDFSFDDSAD ESSEESSDESSDESSDESSDESSEESSDESSEESSDESSDESSEESSDESSDESSDESSEESSDESSDESSEESSDESSD ESSEESSDESSDESSDESSEEQSNNAKLAKKLLKVKEILGSLGINAKWLTDKKISFESFSGKISFRDPSNSNKTIPQTYI ENTNIDDLIEALNQLLANKGLSTKASAEKQTM
Sequences:
>Translated_512_residues MFFKKITALVYLLTCFYTLSFAQLKGSLSGGMVGSPKMVYLADILKMNDQVRSGGSGTTSLDLFRVTIQNNTEKEKLAYV LEFFKDGELLVEGGSSFIYTKSFTITNNNVKNSPYRLRSFELNKEIVEKITGQSYSRFGSDVNVPTYMPSGVYTFKMWLK DANGNVASNVILAVLTITNPTGYVTLLSPGNPVGFGTPESINNPLPFFQWQGDAQEYIIEVYEQVEGRQSTFTEAIGNTP HFKKSGILSTSIQFDGGSGTRTFTSGNTYYWRVTSVIEIGGRITQKKTQSEPFAFIYVAPGDNIASTLPTDDFSFDDSAD ESSEESSDESSDESSDESSDESSEESSDESSEESSDESSDESSEESSDESSDESSDESSEESSDESSDESSEESSDESSD ESSEESSDESSDESSDESSEEQSNNAKLAKKLLKVKEILGSLGINAKWLTDKKISFESFSGKISFRDPSNSNKTIPQTYI ENTNIDDLIEALNQLLANKGLSTKASAEKQTM >Mature_512_residues MFFKKITALVYLLTCFYTLSFAQLKGSLSGGMVGSPKMVYLADILKMNDQVRSGGSGTTSLDLFRVTIQNNTEKEKLAYV LEFFKDGELLVEGGSSFIYTKSFTITNNNVKNSPYRLRSFELNKEIVEKITGQSYSRFGSDVNVPTYMPSGVYTFKMWLK DANGNVASNVILAVLTITNPTGYVTLLSPGNPVGFGTPESINNPLPFFQWQGDAQEYIIEVYEQVEGRQSTFTEAIGNTP HFKKSGILSTSIQFDGGSGTRTFTSGNTYYWRVTSVIEIGGRITQKKTQSEPFAFIYVAPGDNIASTLPTDDFSFDDSAD ESSEESSDESSDESSDESSDESSEESSDESSEESSDESSDESSEESSDESSDESSDESSEESSDESSDESSEESSDESSD ESSEESSDESSDESSDESSEEQSNNAKLAKKLLKVKEILGSLGINAKWLTDKKISFESFSGKISFRDPSNSNKTIPQTYI ENTNIDDLIEALNQLLANKGLSTKASAEKQTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56114; Mature: 56114
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFKKITALVYLLTCFYTLSFAQLKGSLSGGMVGSPKMVYLADILKMNDQVRSGGSGTTS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE LDLFRVTIQNNTEKEKLAYVLEFFKDGELLVEGGSSFIYTKSFTITNNNVKNSPYRLRSF EEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCCCEEEEEE ELNKEIVEKITGQSYSRFGSDVNVPTYMPSGVYTFKMWLKDANGNVASNVILAVLTITNP ECCHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCEEEEEEEEECC TGYVTLLSPGNPVGFGTPESINNPLPFFQWQGDAQEYIIEVYEQVEGRQSTFTEAIGNTP CCEEEEECCCCCCCCCCCHHCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCC HFKKSGILSTSIQFDGGSGTRTFTSGNTYYWRVTSVIEIGGRITQKKTQSEPFAFIYVAP CCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEHHHHHHCCHHHCCCCCCCCEEEEEECC GDNIASTLPTDDFSFDDSADESSEESSDESSDESSDESSDESSEESSDESSEESSDESSD CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCC ESSEESSDESSDESSDESSEESSDESSDESSEESSDESSDESSEESSDESSDESSDESSE CCCHHCCCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCCCHHH EQSNNAKLAKKLLKVKEILGSLGINAKWLTDKKISFESFSGKISFRDPSNSNKTIPQTYI HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHH ENTNIDDLIEALNQLLANKGLSTKASAEKQTM CCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCC >Mature Secondary Structure MFFKKITALVYLLTCFYTLSFAQLKGSLSGGMVGSPKMVYLADILKMNDQVRSGGSGTTS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE LDLFRVTIQNNTEKEKLAYVLEFFKDGELLVEGGSSFIYTKSFTITNNNVKNSPYRLRSF EEEEEEEECCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCCCEEEEEE ELNKEIVEKITGQSYSRFGSDVNVPTYMPSGVYTFKMWLKDANGNVASNVILAVLTITNP ECCHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHCEEEEEEEEECC TGYVTLLSPGNPVGFGTPESINNPLPFFQWQGDAQEYIIEVYEQVEGRQSTFTEAIGNTP CCEEEEECCCCCCCCCCCHHCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCC HFKKSGILSTSIQFDGGSGTRTFTSGNTYYWRVTSVIEIGGRITQKKTQSEPFAFIYVAP CCCCCCCEEEEEEECCCCCCEEEECCCEEEEEEHHHHHHCCHHHCCCCCCCCEEEEEECC GDNIASTLPTDDFSFDDSADESSEESSDESSDESSDESSDESSEESSDESSEESSDESSD CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCC ESSEESSDESSDESSDESSEESSDESSDESSEESSDESSDESSEESSDESSDESSDESSE CCCHHCCCCCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCHHCCCCCCCCCCCCHHH EQSNNAKLAKKLLKVKEILGSLGINAKWLTDKKISFESFSGKISFRDPSNSNKTIPQTYI HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHH ENTNIDDLIEALNQLLANKGLSTKASAEKQTM CCCCHHHHHHHHHHHHHCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA