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The map label for this gene is 193214466

Identifier: 193214466

GI number: 193214466

Start: 881687

End: 882097

Strand: Direct

Name: 193214466

Synonym: Ctha_0749

Alternate gene names: NA

Gene position: 881687-882097 (Clockwise)

Preceding gene: 193214464

Following gene: 193214468

Centisome position: 26.77

GC content: 45.74

Gene sequence:

>411_bases
ATGGCAAGATTATTCATGGCTTTAAGCCTCTGTGTTGTTATGCTTTCTGCATGTGGCAAAAAAGCTGAAGAGACTCACGA
AGCCGCAAAAACTGAGGAAGCTGCAAAACCGGCTGAAGCTGGCATTACAAAAGAAGCACTCGCTGCAAACTACAACCTTG
AAAAAGGAAAAGAAGTTTATGAAGCAACTTGCCAAATGTGCCATAACACTGGGATTTCAAACGCGCCAGTTGTTGGGACA
AAAGACGCTTGGACAGAGCGCACCAAACAAGGCATGGAAACAATGATTAAAAAATCCATCGAAGGCTACCAAGGCGAAAG
CGGCCAAATGCCTGCAAAAGGTGGAAACGCCGAACTTACCGACGAGCAAGTTGGCAACGCTGTTGCTTACATGGTTGAAG
CCAGCATCTAA

Upstream 100 bases:

>100_bases
TTATGCGTGTCTGCGCTAACTACAATCAGAAATACAGCTTGTAACCATAGGCGGTTACACTGGATTCTTAATAAAAAAAC
TACTAAGGGAGAACGAAATA

Downstream 100 bases:

>100_bases
GTGCCAAATTAGGCTGAGTTAAAAGGCGGGAGCAATTCCCGCCTTTTTTATTTTCGTCAATCTCACTTATCCGAATTGCT
GCACGAGCAACGCTTCATCC

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c555 [H]

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MARLFMALSLCVVMLSACGKKAEETHEAAKTEEAAKPAEAGITKEALAANYNLEKGKEVYEATCQMCHNTGISNAPVVGT
KDAWTERTKQGMETMIKKSIEGYQGESGQMPAKGGNAELTDEQVGNAVAYMVEASI

Sequences:

>Translated_136_residues
MARLFMALSLCVVMLSACGKKAEETHEAAKTEEAAKPAEAGITKEALAANYNLEKGKEVYEATCQMCHNTGISNAPVVGT
KDAWTERTKQGMETMIKKSIEGYQGESGQMPAKGGNAELTDEQVGNAVAYMVEASI
>Mature_135_residues
ARLFMALSLCVVMLSACGKKAEETHEAAKTEEAAKPAEAGITKEALAANYNLEKGKEVYEATCQMCHNTGISNAPVVGTK
DAWTERTKQGMETMIKKSIEGYQGESGQMPAKGGNAELTDEQVGNAVAYMVEASI

Specific function: This basic c-type monoheme cytochrome has been found exclusively in the green photosynthetic bacteria, although its role in bacterial photosynthesis is not established. It has an unusually low redox potential compared with mitochondrial cytochrome c. It i

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR002323 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 14495; Mature: 14363

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLFMALSLCVVMLSACGKKAEETHEAAKTEEAAKPAEAGITKEALAANYNLEKGKEVY
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHH
EATCQMCHNTGISNAPVVGTKDAWTERTKQGMETMIKKSIEGYQGESGQMPAKGGNAELT
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DEQVGNAVAYMVEASI
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARLFMALSLCVVMLSACGKKAEETHEAAKTEEAAKPAEAGITKEALAANYNLEKGKEVY
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCHHHHHHHH
EATCQMCHNTGISNAPVVGTKDAWTERTKQGMETMIKKSIEGYQGESGQMPAKGGNAELT
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
DEQVGNAVAYMVEASI
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]