| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214420
Identifier: 193214420
GI number: 193214420
Start: 821891
End: 822835
Strand: Direct
Name: 193214420
Synonym: Ctha_0703
Alternate gene names: NA
Gene position: 821891-822835 (Clockwise)
Preceding gene: 193214419
Following gene: 193214422
Centisome position: 24.96
GC content: 45.82
Gene sequence:
>945_bases ATGAGCGCGATAGAAAGTTTACCTTTGAGTTGGTGTCGAGATTCGATTTCCGAACCGAGTTATCGCCGCCAAATACTGCC CATTTCCCGAACTTCATGGATTTCCTTTGCAACACTTCCTCATTCATACGCTTTTGAAAAAATCTACTCGGAATTTCTCG CCAAAAGGCACGATGGCTTTTTATTGCGAGGGTGCCCTTCTGAAGTAGCGCTGTTTCTCGCCGAGCGCGGCTGCGAAGTG GCGCAAACCGGCGCAGAAGCTGTGCTGCAATTAAATGAGCCGCATTTGGAAAAACCTTCGCTTCAAAAATTGCTCAAGCA GGTTCGCAAGCACGGCAATGCCATAGAAATCGTGCTGAATGAGGAAAATCGCCGAAAACTTTATGCGTTTCAAATGACTT GCCGCCATGGCAATAAGCCGCAGCTTAGCGATTTGTTCAGAACATTTCCTTACGAAGCGTGCCGTTGTTTTGCGTTCGTA TCGGCGCAAGGCAAATGGTTGGCTGCCATGACGCTGAGCCAACAAACCACAAAAAAATTGCACACTGAACTGATGCTCAA ACATCGGGAATCGCCTGTCGGGGTGATGGAAGCTTTAATTGAATCGGTGTTTTTTCTCTTGCAAGCGGAAGGATTTTTGG AATGGAGTTTAAGTGAAGTGCCATTTTATCACGTTCAGCAACGCGCGCCGCAGAAATTAAGTGTGACGGAACAAACAGTG GCTGCTGCTGGAGAAATCTGGAAATCTGCTTACAATTTTGATGGTCTATTTCGGTTTAAGGACAAATTTGCTCCTGTTTG GCAGCCTATTTATCTCTGCGCTTATCCACAACTTTCGCTTATATTGCTTGCTGAAATCGCATTCCGAACCGGATATGCCG ATTTGATTTTGCACGATGCCATGCAAAAACTACCACGCAATCCGCTTGGATTTTTAAATTCCTAA
Upstream 100 bases:
>100_bases CGGTCAAAGAGCATCGCGGGGCAATTCAAGTTGAAAGCCAAATTGGGCAAGGAACCACGTTTAACATTTATCTTCCACGA GTTGTTGAAACCCAAGCTGC
Downstream 100 bases:
>100_bases CCGTTTGGGGCTTTTCAATCCAAAAAGAATTTTTGCAAAAAAAAAAGATCAGTTTTTCCGCAAAAAAATTTTTCCGAAGT TCTTGCAGTAGACCCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSAIESLPLSWCRDSISEPSYRRQILPISRTSWISFATLPHSYAFEKIYSEFLAKRHDGFLLRGCPSEVALFLAERGCEV AQTGAEAVLQLNEPHLEKPSLQKLLKQVRKHGNAIEIVLNEENRRKLYAFQMTCRHGNKPQLSDLFRTFPYEACRCFAFV SAQGKWLAAMTLSQQTTKKLHTELMLKHRESPVGVMEALIESVFFLLQAEGFLEWSLSEVPFYHVQQRAPQKLSVTEQTV AAAGEIWKSAYNFDGLFRFKDKFAPVWQPIYLCAYPQLSLILLAEIAFRTGYADLILHDAMQKLPRNPLGFLNS
Sequences:
>Translated_314_residues MSAIESLPLSWCRDSISEPSYRRQILPISRTSWISFATLPHSYAFEKIYSEFLAKRHDGFLLRGCPSEVALFLAERGCEV AQTGAEAVLQLNEPHLEKPSLQKLLKQVRKHGNAIEIVLNEENRRKLYAFQMTCRHGNKPQLSDLFRTFPYEACRCFAFV SAQGKWLAAMTLSQQTTKKLHTELMLKHRESPVGVMEALIESVFFLLQAEGFLEWSLSEVPFYHVQQRAPQKLSVTEQTV AAAGEIWKSAYNFDGLFRFKDKFAPVWQPIYLCAYPQLSLILLAEIAFRTGYADLILHDAMQKLPRNPLGFLNS >Mature_313_residues SAIESLPLSWCRDSISEPSYRRQILPISRTSWISFATLPHSYAFEKIYSEFLAKRHDGFLLRGCPSEVALFLAERGCEVA QTGAEAVLQLNEPHLEKPSLQKLLKQVRKHGNAIEIVLNEENRRKLYAFQMTCRHGNKPQLSDLFRTFPYEACRCFAFVS AQGKWLAAMTLSQQTTKKLHTELMLKHRESPVGVMEALIESVFFLLQAEGFLEWSLSEVPFYHVQQRAPQKLSVTEQTVA AAGEIWKSAYNFDGLFRFKDKFAPVWQPIYLCAYPQLSLILLAEIAFRTGYADLILHDAMQKLPRNPLGFLNS
Specific function: Unknown
COG id: COG2898
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35937; Mature: 35806
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00280 BPTI_KUNITZ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIESLPLSWCRDSISEPSYRRQILPISRTSWISFATLPHSYAFEKIYSEFLAKRHDGF CCCHHHCCHHHHHHHCCCCCHHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCE LLRGCPSEVALFLAERGCEVAQTGAEAVLQLNEPHLEKPSLQKLLKQVRKHGNAIEIVLN EEECCHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEC EENRRKLYAFQMTCRHGNKPQLSDLFRTFPYEACRCFAFVSAQGKWLAAMTLSQQTTKKL CCCCCEEEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH HTELMLKHRESPVGVMEALIESVFFLLQAEGFLEWSLSEVPFYHVQQRAPQKLSVTEQTV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHCCCCCCCHHHHHH AAAGEIWKSAYNFDGLFRFKDKFAPVWQPIYLCAYPQLSLILLAEIAFRTGYADLILHDA HHHHHHHHHHCCCCCHHHHHHHCCCHHCHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH MQKLPRNPLGFLNS HHHCCCCCCCCCCC >Mature Secondary Structure SAIESLPLSWCRDSISEPSYRRQILPISRTSWISFATLPHSYAFEKIYSEFLAKRHDGF CCHHHCCHHHHHHHCCCCCHHHEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCE LLRGCPSEVALFLAERGCEVAQTGAEAVLQLNEPHLEKPSLQKLLKQVRKHGNAIEIVLN EEECCHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCEEEEEEC EENRRKLYAFQMTCRHGNKPQLSDLFRTFPYEACRCFAFVSAQGKWLAAMTLSQQTTKKL CCCCCEEEEEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHH HTELMLKHRESPVGVMEALIESVFFLLQAEGFLEWSLSEVPFYHVQQRAPQKLSVTEQTV HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHEECCCCCCHHHHHHCCCCCCCHHHHHH AAAGEIWKSAYNFDGLFRFKDKFAPVWQPIYLCAYPQLSLILLAEIAFRTGYADLILHDA HHHHHHHHHHCCCCCHHHHHHHCCCHHCHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH MQKLPRNPLGFLNS HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA