| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
Click here to switch to the map view.
The map label for this gene is dgk [H]
Identifier: 193214182
GI number: 193214182
Start: 543589
End: 544239
Strand: Direct
Name: dgk [H]
Synonym: Ctha_0463
Alternate gene names: 193214182
Gene position: 543589-544239 (Clockwise)
Preceding gene: 193214181
Following gene: 193214183
Centisome position: 16.51
GC content: 40.09
Gene sequence:
>651_bases TTGTCCTTTGAAGCGCGTCGTTTAAAATACATCGCTATTGAAGGCGTCATCGGGGTCGGAAAAACTTCATTGGCAAAAAA GCTTTCCGAAAAATGTGGCCATCGCTTGCTGCTTGAAGAATTTGAAGAAAATCCTTTTCTGGCATCTTTTTATCAAAATC CTCAATGTTTTGCGCTTCCCGCGCAATTATTTTTTCTTCTACGTCGCTACAAGCAACAACACCAAATTTCTGAAATCAGC CTTGCGGCAAATGGGCTGATTTCAGATTATTCATTTCAGAAGAATGATATTTTTGCCAAAACGACCTTAAACAAAGAGGA GTTTTCGCTTTATTCAGCCTATGCGGAGATCTTGCAAGCCAATATTCCCAAGCCTGATTTAGTGGTTTATTTGCAGTCCA CGCCAGAGCGCCTTATAAAAAATATTCACCAACGCGCCCGCCGCTATGAACACTGCATAGAAAGCCCTTATATCAAAAAA TTGCATGCTGCGTATAATGAGTTTTTTTTCGCGTTTGCGTCCTCAAATCAATGCGTTATTGATGTTTCTCAACTGGATTT CGTGGAAAATCCCCGAGATTTTGAGCGGCTTTACCGGATTATTTTTTGTGGTGATATGAACGATAAACTCGTGATAAAAA AACCCGAATAA
Upstream 100 bases:
>100_bases TTGTGTTCATTAATGGACGCCTTGCTTTCAAATATCATGTTTATGAATTAGAACTAAAGGAACTGCTGCTTTCTGAAATG TCCTAAAAAGAGCGTGAATT
Downstream 100 bases:
>100_bases ACGTTCATGCAGTCAAACGTGTGTTAACTAAGTACAGAAAATTTAAACCAGACGAGGCGTATTATGATTCGTTCTATTTT ATTTTTAATTCTTGGATATT
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MSFEARRLKYIAIEGVIGVGKTSLAKKLSEKCGHRLLLEEFEENPFLASFYQNPQCFALPAQLFFLLRRYKQQHQISEIS LAANGLISDYSFQKNDIFAKTTLNKEEFSLYSAYAEILQANIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKK LHAAYNEFFFAFASSNQCVIDVSQLDFVENPRDFERLYRIIFCGDMNDKLVIKKPE
Sequences:
>Translated_216_residues MSFEARRLKYIAIEGVIGVGKTSLAKKLSEKCGHRLLLEEFEENPFLASFYQNPQCFALPAQLFFLLRRYKQQHQISEIS LAANGLISDYSFQKNDIFAKTTLNKEEFSLYSAYAEILQANIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKK LHAAYNEFFFAFASSNQCVIDVSQLDFVENPRDFERLYRIIFCGDMNDKLVIKKPE >Mature_215_residues SFEARRLKYIAIEGVIGVGKTSLAKKLSEKCGHRLLLEEFEENPFLASFYQNPQCFALPAQLFFLLRRYKQQHQISEISL AANGLISDYSFQKNDIFAKTTLNKEEFSLYSAYAEILQANIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKKL HAAYNEFFFAFASSNQCVIDVSQLDFVENPRDFERLYRIIFCGDMNDKLVIKKPE
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 25196; Mature: 25065
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEARRLKYIAIEGVIGVGKTSLAKKLSEKCGHRLLLEEFEENPFLASFYQNPQCFALP CCCCHHHEEEEEEECEECCCHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCCCCCEEEEH AQLFFLLRRYKQQHQISEISLAANGLISDYSFQKNDIFAKTTLNKEEFSLYSAYAEILQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHC NIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKKLHAAYNEFFFAFASSNQCVI CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCEEE DVSQLDFVENPRDFERLYRIIFCGDMNDKLVIKKPE EHHHHCCCCCCHHHHHHHHHHEECCCCCCEEEECCC >Mature Secondary Structure SFEARRLKYIAIEGVIGVGKTSLAKKLSEKCGHRLLLEEFEENPFLASFYQNPQCFALP CCCHHHEEEEEEECEECCCHHHHHHHHHHHHCHHHHHHHHCCCCCEEECCCCCCEEEEH AQLFFLLRRYKQQHQISEISLAANGLISDYSFQKNDIFAKTTLNKEEFSLYSAYAEILQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHC NIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKKLHAAYNEFFFAFASSNQCVI CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCEEE DVSQLDFVENPRDFERLYRIIFCGDMNDKLVIKKPE EHHHHCCCCCCHHHHHHHHHHEECCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]