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The map label for this gene is rfaF [C]

Identifier: 193214150

GI number: 193214150

Start: 503355

End: 504449

Strand: Direct

Name: rfaF [C]

Synonym: Ctha_0431

Alternate gene names: 193214150

Gene position: 503355-504449 (Clockwise)

Preceding gene: 193214146

Following gene: 193214151

Centisome position: 15.28

GC content: 47.85

Gene sequence:

>1095_bases
ATGAACTTAAAAACAGACTGCAAGTTCTTTCGAGGCGATGCCCCTTGCAAACCTCACAAGAAAGAAGGCGTGCACTGCGA
GAACTGCTCGCACTATCAACCGATTTCTCATAGAATTTTAATTATCAAGCTTGGCGCTTTGGGCGATGTGATTCGCACAA
CGCCAATTTTGGAAGCGCTCCGCAACATTTACCCAAATGCACATATTTACTGGCTCACCTACGCCACCGACATTCTGCCC
GACACCGTCGATCGGAAGCTTCCTTTTACAGCCGGAAGTACGCTGATTCTCGAGGAAACGGAATTCGATCTGGCCTTCAA
CTTTGATAAAGACCTCGAGGCGTGCGCGCTTTTAAACCGCGTGCGTGCGAAAAAGAAAAAAGGCTTTGGCCTGAAACACG
GTGTTTGCACGCCGCTGGATTCGGACGTCGAGCACAAATTTTTAACCGGTGTGTTCGACGATATTAGCAAAGCAAACACA
AAATCCTATCCCCAAGAAATTTTTGAAATTGCAGGCCTTTCGTTCTCCGGCGAAGCCTATCAATTGGATAATACTGAAGC
CGGAAAAACCGTTTGGCCAGTTGACAAAGAGAAAAAAATTGTTGGGCTAAACACCGGCTGCGGCGAGCGCTGGCCTTCGC
GGCTTTGGCCAAACGATTATTGGCAGGCGCTGATGAGCGGACTTTTGAAAAGCGGCTATGAGGTTGTGCTGCTCGGCGGC
GCTTCTGAACACGAGAAAAATCAGTCGCTCAGCAAAGCGACTGGCGCGAAATACTTTGGCCATTTTTCACTCAAGAAATT
TATAGACTTAATTGATCAATGCGATATTGTTATTACACAAGTGACGATGGCCATGCACCTTGCCATTGGCCGAAAAAAGC
GCCTGATTCTCATGAACAACATTTTCAATAAGCACGAATTTGAACTTTATGGCCATGGTGAAATTATCGAACCCAGCACC
GGCTGCGATTGCTACTACCTCGCCAAATGCAAGCGTGAAGCCGAAGGCGGCGTGCCTTGTATGCGAGATATTTTGCCCGG
CGAAGTGCTCAGCGCTATTGATCGCCAAGCCAAACTTGTTGAAAAAGCATCGTGA

Upstream 100 bases:

>100_bases
TAGGCGTGAAGCAATGATGATAAATCGGTCTTTTCGTATTTGTTAGGAAATGCAAACGCCAAAAATAACTTTTCAAATCG
AGATTTAATTTTCACCGTTG

Downstream 100 bases:

>100_bases
AAATTTCATACATCAGCACATTTTTTCCTTTGCGCGGCGGCATTGCGCATTTCAACACGCTGCTTTATAAAGAACTTTCG
GCGCGTGGCCATCAATTGCA

Product: family 9 glycosyl transferase

Products: NA

Alternate protein names: ADP-HeptoseLPS Heptosyltransferase-Like; ADP-Heptose-Lipopolysaccharide Heptosyltransferase II; ADP-HeptoseLPS Heptosyltransferase II; Heptosyltransferase; Glycosyl Transferase Family Protein; Family 9 Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNLKTDCKFFRGDAPCKPHKKEGVHCENCSHYQPISHRILIIKLGALGDVIRTTPILEALRNIYPNAHIYWLTYATDILP
DTVDRKLPFTAGSTLILEETEFDLAFNFDKDLEACALLNRVRAKKKKGFGLKHGVCTPLDSDVEHKFLTGVFDDISKANT
KSYPQEIFEIAGLSFSGEAYQLDNTEAGKTVWPVDKEKKIVGLNTGCGERWPSRLWPNDYWQALMSGLLKSGYEVVLLGG
ASEHEKNQSLSKATGAKYFGHFSLKKFIDLIDQCDIVITQVTMAMHLAIGRKKRLILMNNIFNKHEFELYGHGEIIEPST
GCDCYYLAKCKREAEGGVPCMRDILPGEVLSAIDRQAKLVEKAS

Sequences:

>Translated_364_residues
MNLKTDCKFFRGDAPCKPHKKEGVHCENCSHYQPISHRILIIKLGALGDVIRTTPILEALRNIYPNAHIYWLTYATDILP
DTVDRKLPFTAGSTLILEETEFDLAFNFDKDLEACALLNRVRAKKKKGFGLKHGVCTPLDSDVEHKFLTGVFDDISKANT
KSYPQEIFEIAGLSFSGEAYQLDNTEAGKTVWPVDKEKKIVGLNTGCGERWPSRLWPNDYWQALMSGLLKSGYEVVLLGG
ASEHEKNQSLSKATGAKYFGHFSLKKFIDLIDQCDIVITQVTMAMHLAIGRKKRLILMNNIFNKHEFELYGHGEIIEPST
GCDCYYLAKCKREAEGGVPCMRDILPGEVLSAIDRQAKLVEKAS
>Mature_364_residues
MNLKTDCKFFRGDAPCKPHKKEGVHCENCSHYQPISHRILIIKLGALGDVIRTTPILEALRNIYPNAHIYWLTYATDILP
DTVDRKLPFTAGSTLILEETEFDLAFNFDKDLEACALLNRVRAKKKKGFGLKHGVCTPLDSDVEHKFLTGVFDDISKANT
KSYPQEIFEIAGLSFSGEAYQLDNTEAGKTVWPVDKEKKIVGLNTGCGERWPSRLWPNDYWQALMSGLLKSGYEVVLLGG
ASEHEKNQSLSKATGAKYFGHFSLKKFIDLIDQCDIVITQVTMAMHLAIGRKKRLILMNNIFNKHEFELYGHGEIIEPST
GCDCYYLAKCKREAEGGVPCMRDILPGEVLSAIDRQAKLVEKAS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40866; Mature: 40866

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKTDCKFFRGDAPCKPHKKEGVHCENCSHYQPISHRILIIKLGALGDVIRTTPILEAL
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
RNIYPNAHIYWLTYATDILPDTVDRKLPFTAGSTLILEETEFDLAFNFDKDLEACALLNR
HHHCCCCEEEEEEEEHHHCCCHHCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHH
VRAKKKKGFGLKHGVCTPLDSDVEHKFLTGVFDDISKANTKSYPQEIFEIAGLSFSGEAY
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEE
QLDNTEAGKTVWPVDKEKKIVGLNTGCGERWPSRLWPNDYWQALMSGLLKSGYEVVLLGG
ECCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC
ASEHEKNQSLSKATGAKYFGHFSLKKFIDLIDQCDIVITQVTMAMHLAIGRKKRLILMNN
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
IFNKHEFELYGHGEIIEPSTGCDCYYLAKCKREAEGGVPCMRDILPGEVLSAIDRQAKLV
CCCCCCEEEEECCCEECCCCCCCEEHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHH
EKAS
HCCC
>Mature Secondary Structure
MNLKTDCKFFRGDAPCKPHKKEGVHCENCSHYQPISHRILIIKLGALGDVIRTTPILEAL
CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
RNIYPNAHIYWLTYATDILPDTVDRKLPFTAGSTLILEETEFDLAFNFDKDLEACALLNR
HHHCCCCEEEEEEEEHHHCCCHHCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHH
VRAKKKKGFGLKHGVCTPLDSDVEHKFLTGVFDDISKANTKSYPQEIFEIAGLSFSGEAY
HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEE
QLDNTEAGKTVWPVDKEKKIVGLNTGCGERWPSRLWPNDYWQALMSGLLKSGYEVVLLGG
ECCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECC
ASEHEKNQSLSKATGAKYFGHFSLKKFIDLIDQCDIVITQVTMAMHLAIGRKKRLILMNN
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
IFNKHEFELYGHGEIIEPSTGCDCYYLAKCKREAEGGVPCMRDILPGEVLSAIDRQAKLV
CCCCCCEEEEECCCEECCCCCCCEEHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHH
EKAS
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA