| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214139
Identifier: 193214139
GI number: 193214139
Start: 489583
End: 490938
Strand: Direct
Name: 193214139
Synonym: Ctha_0420
Alternate gene names: NA
Gene position: 489583-490938 (Clockwise)
Preceding gene: 193214138
Following gene: 193214146
Centisome position: 14.87
GC content: 46.53
Gene sequence:
>1356_bases ATGCTAAAAATCACCCAATTGTTTTTGCTTGGCACGCTGCTTATTCAAACGGAGCTTGGCGCATTGCAGGCGCAAGATTT GGAGCGTAAATCGCTTGCGGTTACGGTTTATAACGCCAATTTTGGCATTGTGAAAGATGTTCGTGAAGCTCAAATGAAAT CTGGCATTTCAGAAATTCGCCTTACAGATGTTGCTGCACAAATCGATCCGACAAGTGTTTTGGTAAAATCGCAAGGTTCG ATCATCGAGCAAAATTTCCGCTACGACCTTGCAAGCCTTTCAAAAATTCTTGAGCGCTACATCGAAAAAGAAATTCGCTT GATCGGCGAAGACAAAGAATTGCTGGAAGGCACGCTCCTTTCTGTGCAAGGAAACTCGGTGGTTTTGAGAAAAAAGGACG GCGGACTGTTGCTCATTCCGAGCATTGATGATTATCGCCTATCGGTGGAGGCGCTGCCCGACGGATTGATCACCAAGCCC ACGCTGGTTTGGCTGGTGAATTCAAAAAAAAGTGGCAAGGAAAATCTGGAGGTTTCCTACAAAACCTACGGAATTCGCTG GCACGCGGAATATGTTGCGTTGCTAAATCCTAACGATGAGCAAATGGAGTTGAAAGCGTGGGTTAGCGTTGAAAATAATT CCGGCGCGAGTTATCCGAACGCGAAACTGAAATTGGTCGCGGGCGATGTGAATCAAGTTTCTACGCAGCCCGTGCTGGCT AAAGCGGAACGCGCAACTTTCGGGGCGGCGGTAGCGGACGAGGCGCAATTTCAGGAGAACTCGTTTTTTGAATATCACAT CTACACGCTTGAGCGCCCGGCAACGCTCATGGAAAATGAGGTTAAGCAAATCTCGCTTTTTGAAGCCGATGGCGTGCGCG TCAAGAAAAAATATCTGTATCGCGGTGGAAATAGCAAGGTTTCCGTGGCGATTGAATTTCAAAACGACAAATCATCAGGG CTTGGCCAGCCCATGCCGAAAGGAACCGTTCGCGTGATGAAGTCGGATGGCCAGTCGCTTGAATTTATCGGCGAGGATGA ACTTGATCACACGCCGCTGAAGGAAAAAGTGAATTTGAAAATTGGCGATGCGTTTGATGTTGTGGCCGAAGAAGTTCGCG AAAATTATAAGCGCATTTCGCAGTCGGTAAATGAGCAGACCTACAAAGTCACGCTGAAGAATCGCAAGAAGGAAAATATT TCGGTTGAAGTCGAGCGCTACTTGGGCTTGAATTGGGAAATTTTGGATTCGTCATTGAAATACGAAAAAAAGGACGCTTC CAGAGTTGTGTTTGATGTGCCGGTCAAAAGCGATAGCGAAACCGTTTTAAAATTCACTGTTCGCTATGTGAATTAA
Upstream 100 bases:
>100_bases GTCATTTCATGGATTTTAAGCACACTTTTCAACACAAAGTGACTGCAATTTTCCAGAATTTCCGTTAGGAAACATTCATT TTTCAACAAAATCACTCATC
Downstream 100 bases:
>100_bases AGAGGCATCCGCCCAAACACGCGCTGAATTTTATAGCAAACTGGATATGACGGTCTCGTGCGATGTGAATCAATCTTTTT TTGACAAAAAGCATTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MLKITQLFLLGTLLIQTELGALQAQDLERKSLAVTVYNANFGIVKDVREAQMKSGISEIRLTDVAAQIDPTSVLVKSQGS IIEQNFRYDLASLSKILERYIEKEIRLIGEDKELLEGTLLSVQGNSVVLRKKDGGLLLIPSIDDYRLSVEALPDGLITKP TLVWLVNSKKSGKENLEVSYKTYGIRWHAEYVALLNPNDEQMELKAWVSVENNSGASYPNAKLKLVAGDVNQVSTQPVLA KAERATFGAAVADEAQFQENSFFEYHIYTLERPATLMENEVKQISLFEADGVRVKKKYLYRGGNSKVSVAIEFQNDKSSG LGQPMPKGTVRVMKSDGQSLEFIGEDELDHTPLKEKVNLKIGDAFDVVAEEVRENYKRISQSVNEQTYKVTLKNRKKENI SVEVERYLGLNWEILDSSLKYEKKDASRVVFDVPVKSDSETVLKFTVRYVN
Sequences:
>Translated_451_residues MLKITQLFLLGTLLIQTELGALQAQDLERKSLAVTVYNANFGIVKDVREAQMKSGISEIRLTDVAAQIDPTSVLVKSQGS IIEQNFRYDLASLSKILERYIEKEIRLIGEDKELLEGTLLSVQGNSVVLRKKDGGLLLIPSIDDYRLSVEALPDGLITKP TLVWLVNSKKSGKENLEVSYKTYGIRWHAEYVALLNPNDEQMELKAWVSVENNSGASYPNAKLKLVAGDVNQVSTQPVLA KAERATFGAAVADEAQFQENSFFEYHIYTLERPATLMENEVKQISLFEADGVRVKKKYLYRGGNSKVSVAIEFQNDKSSG LGQPMPKGTVRVMKSDGQSLEFIGEDELDHTPLKEKVNLKIGDAFDVVAEEVRENYKRISQSVNEQTYKVTLKNRKKENI SVEVERYLGLNWEILDSSLKYEKKDASRVVFDVPVKSDSETVLKFTVRYVN >Mature_451_residues MLKITQLFLLGTLLIQTELGALQAQDLERKSLAVTVYNANFGIVKDVREAQMKSGISEIRLTDVAAQIDPTSVLVKSQGS IIEQNFRYDLASLSKILERYIEKEIRLIGEDKELLEGTLLSVQGNSVVLRKKDGGLLLIPSIDDYRLSVEALPDGLITKP TLVWLVNSKKSGKENLEVSYKTYGIRWHAEYVALLNPNDEQMELKAWVSVENNSGASYPNAKLKLVAGDVNQVSTQPVLA KAERATFGAAVADEAQFQENSFFEYHIYTLERPATLMENEVKQISLFEADGVRVKKKYLYRGGNSKVSVAIEFQNDKSSG LGQPMPKGTVRVMKSDGQSLEFIGEDELDHTPLKEKVNLKIGDAFDVVAEEVRENYKRISQSVNEQTYKVTLKNRKKENI SVEVERYLGLNWEILDSSLKYEKKDASRVVFDVPVKSDSETVLKFTVRYVN
Specific function: Unknown
COG id: COG5316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50700; Mature: 50700
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKITQLFLLGTLLIQTELGALQAQDLERKSLAVTVYNANFGIVKDVREAQMKSGISEIR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHEE LTDVAAQIDPTSVLVKSQGSIIEQNFRYDLASLSKILERYIEKEIRLIGEDKELLEGTLL EEEHHEECCCCEEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHHHEECCCCHHHHCCEEE SVQGNSVVLRKKDGGLLLIPSIDDYRLSVEALPDGLITKPTLVWLVNSKKSGKENLEVSY EEECCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEE KTYGIRWHAEYVALLNPNDEQMELKAWVSVENNSGASYPNAKLKLVAGDVNQVSTQPVLA EEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHH KAERATFGAAVADEAQFQENSFFEYHIYTLERPATLMENEVKQISLFEADGVRVKKKYLY HHHHHHCCCHHCCCHHHCCCCEEEEEEEEECCCHHHHHCCCCEEEEEECCCCEEEEEEEE RGGNSKVSVAIEFQNDKSSGLGQPMPKGTVRVMKSDGQSLEFIGEDELDHTPLKEKVNLK ECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEE IGDAFDVVAEEVRENYKRISQSVNEQTYKVTLKNRKKENISVEVERYLGLNWEILDSSLK ECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEHHCCCCEEEECCCCC YEKKDASRVVFDVPVKSDSETVLKFTVRYVN CCCCCCCEEEEEECCCCCCCEEEEEEEEECC >Mature Secondary Structure MLKITQLFLLGTLLIQTELGALQAQDLERKSLAVTVYNANFGIVKDVREAQMKSGISEIR CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHEE LTDVAAQIDPTSVLVKSQGSIIEQNFRYDLASLSKILERYIEKEIRLIGEDKELLEGTLL EEEHHEECCCCEEEEECCCCEEHHHCCCCHHHHHHHHHHHHHHHHEECCCCHHHHCCEEE SVQGNSVVLRKKDGGLLLIPSIDDYRLSVEALPDGLITKPTLVWLVNSKKSGKENLEVSY EEECCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEE KTYGIRWHAEYVALLNPNDEQMELKAWVSVENNSGASYPNAKLKLVAGDVNQVSTQPVLA EEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCHHH KAERATFGAAVADEAQFQENSFFEYHIYTLERPATLMENEVKQISLFEADGVRVKKKYLY HHHHHHCCCHHCCCHHHCCCCEEEEEEEEECCCHHHHHCCCCEEEEEECCCCEEEEEEEE RGGNSKVSVAIEFQNDKSSGLGQPMPKGTVRVMKSDGQSLEFIGEDELDHTPLKEKVNLK ECCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEE IGDAFDVVAEEVRENYKRISQSVNEQTYKVTLKNRKKENISVEVERYLGLNWEILDSSLK ECCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEEEEHHCCCCEEEECCCCC YEKKDASRVVFDVPVKSDSETVLKFTVRYVN CCCCCCCEEEEEECCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA