| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193214137
Identifier: 193214137
GI number: 193214137
Start: 487471
End: 489138
Strand: Direct
Name: 193214137
Synonym: Ctha_0418
Alternate gene names: NA
Gene position: 487471-489138 (Clockwise)
Preceding gene: 193214123
Following gene: 193214138
Centisome position: 14.8
GC content: 52.7
Gene sequence:
>1668_bases ATGGAAAGAAAACATATCGGGAAAATTATTCGCGGCTCGCTGCTCGAAGGCTTGGAGATGAAGCTCGATGCGTTTGAGCA TGTGGAAAGCGTCAAGGCCGGCAAGTTTGTCGTGGTTGAAGGCGAGCAGTACGATTTTTTTTCCATCATCACCGACTTGC GCTTGGAGGCCACGAGCAACGCGCTTTTGAGCAATCCGCCGAGCCTTCAAAGCGATGTGCTGCGCGACATCATCAGCGGG ACGATTTCATATTCCGTCGTCAATTTGCGCCCGATGCTCATGCTTGAACGGCACTTATACCCGGAATTTGCCGCGCCGCT CGAACCCGTCAAAACGATTCCCTCGCACTTCGCCTTCGTCAGCGAGGCCACAGATGAGGACATCGCCAAAGTCTTCGGCA GCGAATCGGAAAATCAAAACGGGCGGAAATTTTTCTACATCGGCACACCGCTCGACATGACGCAGCCCGTTTGTTTAGAC CTCGAACGATTTTGCGAACGCAGCAGCGCCGTCTTCGGGCGAACCGGCACGGGCAAAACCTTCATCACGCGCCTGTTGCT TGCCGGGCTGATTAAAACCGACGCGGCAGTTAATCTCGTTTTCGACATGCACAACGAGTACGGCACGAAAGGCACGTTTG AAGGACAAGGCGCGTCGTCGGTCAAGGGTTTGCAGCCACTTTTTGCCACAACGGGCAAGGTGAAAATTTATTCGCTCGAT CCCGAATCCACGCAGCGGCGCGGCGCTCACTGCGACCGGGAAGTGCGGCTGAGCATCGAACAAATCGAGCCGGACGACAT CTTGCTTTTGCAAGAAGAACTTCGCTTAAACCCGACCGCCGCCGAATATTCCAACATTTTGAAAAATCGCTACGGCAAAG ATTGGCTCGCCCGCTTCATGGATTTGATGGAGGACGACGACGAAAAGGCGTTGGAAAATTTCGCCGCGCAAAACCATCTG TTGCCGAGTTCGCTCGAGGCGCTTTATCGCCGGCTCACGCGCCTTCGCGACATTTGCCAATTTCTTGATTTTTCGCCGAA CAAAGGAAAATTGAACATCATCGAAGATTTGCTGAACGATCTTTCGCGCGGCACCAGCGTGGTAATGGAGTTCGGCAAAT ACGACAACATGATGAGCTATTTGCTCGTCGCCAACATCATCACGCGGCGCGTCGAGGAGGCTTATAAGGAAAAAACCGAC GTGTTTTTGCGAACCGGCAATGAGCTGGACAAGCCGAAGCAACTTGTCATCACCATTGAAGAGGCGCATAAATTTTTAAA TCCGAAATCGGCGCAGCAAACCTCGTTCGGTAAAATTGCCCGCGAGCTGAGAAAATATTTCGTCTCGCTGATGATTGTCG ACCAGCGACCGTCGGGGATTTATGACGAAATTTTGAGCCAAATCGGGACAAAAATCGTGGCGGCGCTTTCCGACGAGCGC GACATCAACGCCGTCCTGACCGGCACGAGCAACCCGGGCGGGATGCGCAACATCTTGGCCAGCTTGGACACCAAACAGCA AGCCCTTGTGATGGGACACGCCGTCCCGATGCCCGTCGTGATTCGCACACGCGACTACGACGAAAAATTTTACACCGATA TGGGCTATACTGACCGTGAGGCTCGTAAAAGGAAAAATAAAGCTAATTTGAGCGATTTATACGATTAG
Upstream 100 bases:
>100_bases TAGATCTCGCGAAAATGAAGATTTTGTCAGGGCTTATCGGGCTCGTATCTTTATTAAGAAGTTCAGAGAATTTTAACAAA AAGCGATTTTGGACAGCCCC
Downstream 100 bases:
>100_bases CTGATTTTTCAAGGAGAAAAGTTCAACGAGAAAAGGAAAAAACAATGAAACTCATTCTTTCGTGGATTATCAACGCTGTG GCGGTGTATGCAACGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MERKHIGKIIRGSLLEGLEMKLDAFEHVESVKAGKFVVVEGEQYDFFSIITDLRLEATSNALLSNPPSLQSDVLRDIISG TISYSVVNLRPMLMLERHLYPEFAAPLEPVKTIPSHFAFVSEATDEDIAKVFGSESENQNGRKFFYIGTPLDMTQPVCLD LERFCERSSAVFGRTGTGKTFITRLLLAGLIKTDAAVNLVFDMHNEYGTKGTFEGQGASSVKGLQPLFATTGKVKIYSLD PESTQRRGAHCDREVRLSIEQIEPDDILLLQEELRLNPTAAEYSNILKNRYGKDWLARFMDLMEDDDEKALENFAAQNHL LPSSLEALYRRLTRLRDICQFLDFSPNKGKLNIIEDLLNDLSRGTSVVMEFGKYDNMMSYLLVANIITRRVEEAYKEKTD VFLRTGNELDKPKQLVITIEEAHKFLNPKSAQQTSFGKIARELRKYFVSLMIVDQRPSGIYDEILSQIGTKIVAALSDER DINAVLTGTSNPGGMRNILASLDTKQQALVMGHAVPMPVVIRTRDYDEKFYTDMGYTDREARKRKNKANLSDLYD
Sequences:
>Translated_555_residues MERKHIGKIIRGSLLEGLEMKLDAFEHVESVKAGKFVVVEGEQYDFFSIITDLRLEATSNALLSNPPSLQSDVLRDIISG TISYSVVNLRPMLMLERHLYPEFAAPLEPVKTIPSHFAFVSEATDEDIAKVFGSESENQNGRKFFYIGTPLDMTQPVCLD LERFCERSSAVFGRTGTGKTFITRLLLAGLIKTDAAVNLVFDMHNEYGTKGTFEGQGASSVKGLQPLFATTGKVKIYSLD PESTQRRGAHCDREVRLSIEQIEPDDILLLQEELRLNPTAAEYSNILKNRYGKDWLARFMDLMEDDDEKALENFAAQNHL LPSSLEALYRRLTRLRDICQFLDFSPNKGKLNIIEDLLNDLSRGTSVVMEFGKYDNMMSYLLVANIITRRVEEAYKEKTD VFLRTGNELDKPKQLVITIEEAHKFLNPKSAQQTSFGKIARELRKYFVSLMIVDQRPSGIYDEILSQIGTKIVAALSDER DINAVLTGTSNPGGMRNILASLDTKQQALVMGHAVPMPVVIRTRDYDEKFYTDMGYTDREARKRKNKANLSDLYD >Mature_555_residues MERKHIGKIIRGSLLEGLEMKLDAFEHVESVKAGKFVVVEGEQYDFFSIITDLRLEATSNALLSNPPSLQSDVLRDIISG TISYSVVNLRPMLMLERHLYPEFAAPLEPVKTIPSHFAFVSEATDEDIAKVFGSESENQNGRKFFYIGTPLDMTQPVCLD LERFCERSSAVFGRTGTGKTFITRLLLAGLIKTDAAVNLVFDMHNEYGTKGTFEGQGASSVKGLQPLFATTGKVKIYSLD PESTQRRGAHCDREVRLSIEQIEPDDILLLQEELRLNPTAAEYSNILKNRYGKDWLARFMDLMEDDDEKALENFAAQNHL LPSSLEALYRRLTRLRDICQFLDFSPNKGKLNIIEDLLNDLSRGTSVVMEFGKYDNMMSYLLVANIITRRVEEAYKEKTD VFLRTGNELDKPKQLVITIEEAHKFLNPKSAQQTSFGKIARELRKYFVSLMIVDQRPSGIYDEILSQIGTKIVAALSDER DINAVLTGTSNPGGMRNILASLDTKQQALVMGHAVPMPVVIRTRDYDEKFYTDMGYTDREARKRKNKANLSDLYD
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 62753; Mature: 62753
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKHIGKIIRGSLLEGLEMKLDAFEHVESVKAGKFVVVEGEQYDFFSIITDLRLEATSN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC ALLSNPPSLQSDVLRDIISGTISYSVVNLRPMLMLERHLYPEFAAPLEPVKTIPSHFAFV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHH SEATDEDIAKVFGSESENQNGRKFFYIGTPLDMTQPVCLDLERFCERSSAVFGRTGTGKT HHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCHH FITRLLLAGLIKTDAAVNLVFDMHNEYGTKGTFEGQGASSVKGLQPLFATTGKVKIYSLD HHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEC PESTQRRGAHCDREVRLSIEQIEPDDILLLQEELRLNPTAAEYSNILKNRYGKDWLARFM CHHHHHCCCCCCHHHEEEHHHCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH DLMEDDDEKALENFAAQNHLLPSSLEALYRRLTRLRDICQFLDFSPNKGKLNIIEDLLND HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LSRGTSVVMEFGKYDNMMSYLLVANIITRRVEEAYKEKTDVFLRTGNELDKPKQLVITIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEHH EAHKFLNPKSAQQTSFGKIARELRKYFVSLMIVDQRPSGIYDEILSQIGTKIVAALSDER HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCC DINAVLTGTSNPGGMRNILASLDTKQQALVMGHAVPMPVVIRTRDYDEKFYTDMGYTDRE CCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCHH ARKRKNKANLSDLYD HHHHHCCCCHHHCCC >Mature Secondary Structure MERKHIGKIIRGSLLEGLEMKLDAFEHVESVKAGKFVVVEGEQYDFFSIITDLRLEATSN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCC ALLSNPPSLQSDVLRDIISGTISYSVVNLRPMLMLERHLYPEFAAPLEPVKTIPSHFAFV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHH SEATDEDIAKVFGSESENQNGRKFFYIGTPLDMTQPVCLDLERFCERSSAVFGRTGTGKT HHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCEECCCCCCHH FITRLLLAGLIKTDAAVNLVFDMHNEYGTKGTFEGQGASSVKGLQPLFATTGKVKIYSLD HHHHHHHHHHHHCCHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEEC PESTQRRGAHCDREVRLSIEQIEPDDILLLQEELRLNPTAAEYSNILKNRYGKDWLARFM CHHHHHCCCCCCHHHEEEHHHCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCHHHHHHHH DLMEDDDEKALENFAAQNHLLPSSLEALYRRLTRLRDICQFLDFSPNKGKLNIIEDLLND HHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LSRGTSVVMEFGKYDNMMSYLLVANIITRRVEEAYKEKTDVFLRTGNELDKPKQLVITIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEHH EAHKFLNPKSAQQTSFGKIARELRKYFVSLMIVDQRPSGIYDEILSQIGTKIVAALSDER HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHCCCC DINAVLTGTSNPGGMRNILASLDTKQQALVMGHAVPMPVVIRTRDYDEKFYTDMGYTDRE CCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHCCCCCCHH ARKRKNKANLSDLYD HHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]