| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is icfG [H]
Identifier: 193213945
GI number: 193213945
Start: 265727
End: 267436
Strand: Direct
Name: icfG [H]
Synonym: Ctha_0226
Alternate gene names: 193213945
Gene position: 265727-267436 (Clockwise)
Preceding gene: 193213944
Following gene: 193213946
Centisome position: 8.07
GC content: 44.8
Gene sequence:
>1710_bases ATGCCAGAAGACGATTCTTTACATGCTCAATCACTTGAGCGCATCAAGCCACAGGATTTTGATTACAATTCGTTGCTTGA ATCAAGCAAAATCTTAAACTCATCTCTCGATTTAGAATTTATCCTTTCTCATATTTTGCGTACAGTCATGGGCAAATTTA TGTTGCTCAAAGCCTGTATCATCACCTTTTCTGAATCGGATCAATCAGTCTTTGAGCTTGCCGCCTCGCGCGGATTGCAT GGCGCTAAAAAGCAGTTCACAAACCTGGAGCTTTTTCAACAACAGCACGACATTCACGCGCTAATTGATCTTTCTATCGG AAACAAACGCATTGGCTACATCGGCCTAAGCGATAAGTTCAATCGCCAGCCATTCAAAAGCGCTGAAAGCGAATTTTTGG AGTCGCTTGCCTCGCTTGCTGCCAGTGCCATTGAAAACGCGTTGTTTCTCAATCAGCTTAATGAGCAAAAAGCGCATTTG AAGCAGGTTAATGAAAGTCTCCAGCAAAAAATTCTTCAGTTCAATACGCTCTTTGAACTAACGCAGCGCTACCGAGTTGA TCAAACAAAGGAAGATATTTTGCAGATTTTGATGCACGCCTTGATGCTGCAAATGAACTTCAAAAGCTACGTGGTGCTTT TGCGAAATGAAATGAATTTTGACGTGGCCATGGCAAAAGACATCAAATCTGATCACCTTGAGGCAAAGGAAATTGGGATT ATTTTTTCTTCATCATTTGCGCACGAGCTAAAATGGGAAGAGTTTCCGAGCATCACCGCTGCGGGTTGCTATCACGCAAT TCCGCTTCGCACCACAAGCACCAGCTTAGGCGTGATTCTTTTTGGCGAACGCCGCACAGAAGAACCGTTTACCGAAACAG ATTATGAATTTATGTTTTTAGCTGCAGCGCAAGCCGCGGGCGCCATCGAGCAGGTTCGTTTGTTTAAAGATGCCCTTGAA AAACAAGCCATTGAAAAGGAATTGGCGCTGGCGTATGAAATCCAAACGAATCTTTTTCCCAAAAGCCTTCCTAAAAGCTC GATCTACGAAATCGACGCCACGAATTTTCCATCGCTCCATGTAGGCGGCGATTACTACGATGTGTTTGAAGTAGACGATC GGCTTCTTTTTTTGGCCATTGCGGATGTAACGGGCAAAGGCGTTCCAGCTTCGCTGATTATGTCCAACTTGCAAGCGCTC ATCAAAGCATACATCGAAATGGTTCGCGCTGGCGCCATGAGCATCAACGATATGGTCGGAAAAATTAACGACATCATTTA CGGCAACACCACCATTGATAAGTTTATTTCTTTTTTCTGCTGCTTAATCGACAAGGAAAAACTCTCGCTTACCTATATCA ACGCCGGACATAATCCGCCCATACTGCTACGAACGGATGGAAGCCTTTCGCAATTGCAAACAGGCGGGATTGTTTTGGGC GTGTTGCCAAGTACATCGCCTTATGAATCTGAAACGCTTGCGTTGCAAAAAGGCGATATGCTTTTTCTTTACACCGACGG CGTCACAGAAGCCATGAGCAAAGAGCACGAAGAATTTGGGGAAAACCGGCTTATCCAAATTTTGAAAAATGCACAAGGCA ATAGTTGTCCAAGTATCTTGTCCGAAGTCACCCGGGCGATTGACAATTTCGAACCGCCGGGCGAGCACCACGACGATGTC ACCATGATCTGTTTCAAAGTGACGCCTTAA
Upstream 100 bases:
>100_bases AAACATCTCCCTTTAGAAGCAGCTAACGCATAAAGCTTCCAAAACTAATAGAACTTGAGTATCTTTTCAGTGTATTTTTT CGCAGAAACCGATACACTGA
Downstream 100 bases:
>100_bases CTTAAAACAACACGGCCTGGTTTAATTTTTCTGTGAGGTTATTAGAATCACATTTTACTGTTGCTTTTTTTATCAGCGCG ACTTAGTTTTCAACTGAATT
Product: protein serine/threonine phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MPEDDSLHAQSLERIKPQDFDYNSLLESSKILNSSLDLEFILSHILRTVMGKFMLLKACIITFSESDQSVFELAASRGLH GAKKQFTNLELFQQQHDIHALIDLSIGNKRIGYIGLSDKFNRQPFKSAESEFLESLASLAASAIENALFLNQLNEQKAHL KQVNESLQQKILQFNTLFELTQRYRVDQTKEDILQILMHALMLQMNFKSYVVLLRNEMNFDVAMAKDIKSDHLEAKEIGI IFSSSFAHELKWEEFPSITAAGCYHAIPLRTTSTSLGVILFGERRTEEPFTETDYEFMFLAAAQAAGAIEQVRLFKDALE KQAIEKELALAYEIQTNLFPKSLPKSSIYEIDATNFPSLHVGGDYYDVFEVDDRLLFLAIADVTGKGVPASLIMSNLQAL IKAYIEMVRAGAMSINDMVGKINDIIYGNTTIDKFISFFCCLIDKEKLSLTYINAGHNPPILLRTDGSLSQLQTGGIVLG VLPSTSPYESETLALQKGDMLFLYTDGVTEAMSKEHEEFGENRLIQILKNAQGNSCPSILSEVTRAIDNFEPPGEHHDDV TMICFKVTP
Sequences:
>Translated_569_residues MPEDDSLHAQSLERIKPQDFDYNSLLESSKILNSSLDLEFILSHILRTVMGKFMLLKACIITFSESDQSVFELAASRGLH GAKKQFTNLELFQQQHDIHALIDLSIGNKRIGYIGLSDKFNRQPFKSAESEFLESLASLAASAIENALFLNQLNEQKAHL KQVNESLQQKILQFNTLFELTQRYRVDQTKEDILQILMHALMLQMNFKSYVVLLRNEMNFDVAMAKDIKSDHLEAKEIGI IFSSSFAHELKWEEFPSITAAGCYHAIPLRTTSTSLGVILFGERRTEEPFTETDYEFMFLAAAQAAGAIEQVRLFKDALE KQAIEKELALAYEIQTNLFPKSLPKSSIYEIDATNFPSLHVGGDYYDVFEVDDRLLFLAIADVTGKGVPASLIMSNLQAL IKAYIEMVRAGAMSINDMVGKINDIIYGNTTIDKFISFFCCLIDKEKLSLTYINAGHNPPILLRTDGSLSQLQTGGIVLG VLPSTSPYESETLALQKGDMLFLYTDGVTEAMSKEHEEFGENRLIQILKNAQGNSCPSILSEVTRAIDNFEPPGEHHDDV TMICFKVTP >Mature_568_residues PEDDSLHAQSLERIKPQDFDYNSLLESSKILNSSLDLEFILSHILRTVMGKFMLLKACIITFSESDQSVFELAASRGLHG AKKQFTNLELFQQQHDIHALIDLSIGNKRIGYIGLSDKFNRQPFKSAESEFLESLASLAASAIENALFLNQLNEQKAHLK QVNESLQQKILQFNTLFELTQRYRVDQTKEDILQILMHALMLQMNFKSYVVLLRNEMNFDVAMAKDIKSDHLEAKEIGII FSSSFAHELKWEEFPSITAAGCYHAIPLRTTSTSLGVILFGERRTEEPFTETDYEFMFLAAAQAAGAIEQVRLFKDALEK QAIEKELALAYEIQTNLFPKSLPKSSIYEIDATNFPSLHVGGDYYDVFEVDDRLLFLAIADVTGKGVPASLIMSNLQALI KAYIEMVRAGAMSINDMVGKINDIIYGNTTIDKFISFFCCLIDKEKLSLTYINAGHNPPILLRTDGSLSQLQTGGIVLGV LPSTSPYESETLALQKGDMLFLYTDGVTEAMSKEHEEFGENRLIQILKNAQGNSCPSILSEVTRAIDNFEPPGEHHDDVT MICFKVTP
Specific function: Involved in cross-regulation of inorganic carbon and glucose metabolisms [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003660 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00672 HAMP; PF07228 SpoIIE [H]
EC number: NA
Molecular weight: Translated: 63867; Mature: 63736
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEDDSLHAQSLERIKPQDFDYNSLLESSKILNSSLDLEFILSHILRTVMGKFMLLKACI CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ITFSESDQSVFELAASRGLHGAKKQFTNLELFQQQHDIHALIDLSIGNKRIGYIGLSDKF HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCC NRQPFKSAESEFLESLASLAASAIENALFLNQLNEQKAHLKQVNESLQQKILQFNTLFEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQRYRVDQTKEDILQILMHALMLQMNFKSYVVLLRNEMNFDVAMAKDIKSDHLEAKEIGI HHHHCCCCCHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCHHHHHHHHCCCCHHHEEE IFSSSFAHELKWEEFPSITAAGCYHAIPLRTTSTSLGVILFGERRTEEPFTETDYEFMFL EEECCHHHHCCHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE AAAQAAGAIEQVRLFKDALEKQAIEKELALAYEIQTNLFPKSLPKSSIYEIDATNFPSLH EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEE VGGDYYDVFEVDDRLLFLAIADVTGKGVPASLIMSNLQALIKAYIEMVRAGAMSINDMVG ECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH KINDIIYGNTTIDKFISFFCCLIDKEKLSLTYINAGHNPPILLRTDGSLSQLQTGGIVLG HHHHEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCHHHHCCCCEEEE VLPSTSPYESETLALQKGDMLFLYTDGVTEAMSKEHEEFGENRLIQILKNAQGNSCPSIL ECCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHH SEVTRAIDNFEPPGEHHDDVTMICFKVTP HHHHHHHHCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure PEDDSLHAQSLERIKPQDFDYNSLLESSKILNSSLDLEFILSHILRTVMGKFMLLKACI CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH ITFSESDQSVFELAASRGLHGAKKQFTNLELFQQQHDIHALIDLSIGNKRIGYIGLSDKF HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCC NRQPFKSAESEFLESLASLAASAIENALFLNQLNEQKAHLKQVNESLQQKILQFNTLFEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TQRYRVDQTKEDILQILMHALMLQMNFKSYVVLLRNEMNFDVAMAKDIKSDHLEAKEIGI HHHHCCCCCHHHHHHHHHHHHHHHCCCHHEEEEEECCCCCCCHHHHHHHHCCCCHHHEEE IFSSSFAHELKWEEFPSITAAGCYHAIPLRTTSTSLGVILFGERRTEEPFTETDYEFMFL EEECCHHHHCCHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEE AAAQAAGAIEQVRLFKDALEKQAIEKELALAYEIQTNLFPKSLPKSSIYEIDATNFPSLH EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEE VGGDYYDVFEVDDRLLFLAIADVTGKGVPASLIMSNLQALIKAYIEMVRAGAMSINDMVG ECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH KINDIIYGNTTIDKFISFFCCLIDKEKLSLTYINAGHNPPILLRTDGSLSQLQTGGIVLG HHHHEEECCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCHHHHCCCCEEEE VLPSTSPYESETLALQKGDMLFLYTDGVTEAMSKEHEEFGENRLIQILKNAQGNSCPSIL ECCCCCCCCCCEEEEECCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHH SEVTRAIDNFEPPGEHHDDVTMICFKVTP HHHHHHHHCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8075401; 8905231 [H]