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The map label for this gene is ybaW [C]

Identifier: 193213904

GI number: 193213904

Start: 216114

End: 216530

Strand: Direct

Name: ybaW [C]

Synonym: Ctha_0185

Alternate gene names: 193213904

Gene position: 216114-216530 (Clockwise)

Preceding gene: 193213903

Following gene: 193213905

Centisome position: 6.56

GC content: 42.21

Gene sequence:

>417_bases
ATGAAAAAAGTTGAGACCCGTTTTAAAGTTAGAAGTTACGAACTGGACTCATTTGGACATGTCAATCATGCCGTTTATGT
GCAATATTTGGAGTTTGCCCGCAGTGAAATGTTTCGCTCAATTGGATTTTCCATGCAAGACGCGTTTCGCAAGGGAATTT
ATCCGGTTGTGGCCAACTTAACTGTGAATTATCGTAAAGAGCTGCTGCTTCACGACGAAGTCTTGCTCACGTGCTTCATA
TCCAAAATTGGGCGCTCGTCTTTCACCATTCGCGAAGAGGGCTACAAACTGACAAACGGCCAAATGAAAGCCTTTGACGC
AGAAGTTGTCATGGCATTTGTGGATAAAACTTCCTCCGTTTCTGTGATGATTCCAACGGAGGTGCGAAATCAATTTCAAC
AATTACTTTTTTCTTAA

Upstream 100 bases:

>100_bases
CGAACTTCAAAAAGAAGTGCAAGCACTCGGTTTGCAGCTTTTGGCCGCGCAAGAATGACCTGCGACTTTTCCCAAAACCA
TCGCCCGAAAGCCGCTCGCT

Downstream 100 bases:

>100_bases
CTGTAACGATGATCGAGCAAAATCATATTCTTGTTTTAAACGGCCCCAATCTTTCGCGTTTGGGAAAAAGAGAGCCCGGC
GTTTATGGAAGTCGAACGTT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKKVETRFKVRSYELDSFGHVNHAVYVQYLEFARSEMFRSIGFSMQDAFRKGIYPVVANLTVNYRKELLLHDEVLLTCFI
SKIGRSSFTIREEGYKLTNGQMKAFDAEVVMAFVDKTSSVSVMIPTEVRNQFQQLLFS

Sequences:

>Translated_138_residues
MKKVETRFKVRSYELDSFGHVNHAVYVQYLEFARSEMFRSIGFSMQDAFRKGIYPVVANLTVNYRKELLLHDEVLLTCFI
SKIGRSSFTIREEGYKLTNGQMKAFDAEVVMAFVDKTSSVSVMIPTEVRNQFQQLLFS
>Mature_138_residues
MKKVETRFKVRSYELDSFGHVNHAVYVQYLEFARSEMFRSIGFSMQDAFRKGIYPVVANLTVNYRKELLLHDEVLLTCFI
SKIGRSSFTIREEGYKLTNGQMKAFDAEVVMAFVDKTSSVSVMIPTEVRNQFQQLLFS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786647, Length=137, Percent_Identity=28.4671532846715, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16028; Mature: 16028

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVETRFKVRSYELDSFGHVNHAVYVQYLEFARSEMFRSIGFSMQDAFRKGIYPVVANL
CCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHE
TVNYRKELLLHDEVLLTCFISKIGRSSFTIREEGYKLTNGQMKAFDAEVVMAFVDKTSSV
EHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCE
SVMIPTEVRNQFQQLLFS
EEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MKKVETRFKVRSYELDSFGHVNHAVYVQYLEFARSEMFRSIGFSMQDAFRKGIYPVVANL
CCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHE
TVNYRKELLLHDEVLLTCFISKIGRSSFTIREEGYKLTNGQMKAFDAEVVMAFVDKTSSV
EHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCE
SVMIPTEVRNQFQQLLFS
EEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA