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The map label for this gene is ybhL [H]

Identifier: 193213902

GI number: 193213902

Start: 214818

End: 215531

Strand: Direct

Name: ybhL [H]

Synonym: Ctha_0183

Alternate gene names: 193213902

Gene position: 214818-215531 (Clockwise)

Preceding gene: 193213901

Following gene: 193213903

Centisome position: 6.52

GC content: 47.62

Gene sequence:

>714_bases
ATGGAAACAAGACCCTTTTATTATAATCCGGGATACTCACAAGTTTCGGCTGATGTTCAAAATCGAGTGATCAACCAAGT
ATTTGTGTGGATGGCACTTGGCTTGGCACTTACCGCCGGAACAGCTTTTGCAACGGCCAGCTCTGAGGCCATGATGCAAC
TCGTATTCGGCAACCCGATTGTTTTTTTCGGGCTCATCATTGCTGAATTTGGCTTGGTTGTTGGCGTGAGTGCGGCCATC
AACCGTTTGTCGCTTGCGGCGGCAACCGGCTTATTTTTCCTTTACTCCGCCCTGAATGGCGTCACACTGGCCAGCATTTT
CATGGTGTATAGCCTTGGCTCGATTGGCGGGGTGTTTTTAGTCACTGCGGGCACATTCGGCGCCATGAGCCTTTATGGCC
TTACCACAAAACGCGATTTGACAAAAATCGGCAGCTTGGCATTCATGGCGCTCATCGGCATTATCATTGCTGGTGTCGTG
AATATGTTTTTGCACAGCTCGGTCTTAAGCCTTATCGTTAGCCTTATTGGCCTTGTTGTATTTATTGGCCTTACCGCATA
CGACACGCAGAAAATCAAGGAAATGGCTGCCATGACCAACGACGGGGAATCAGAAGGCAAAGTCGCCGTTTTAGGTGCAC
TTTCGCTTTACCTTGATTTTATCAACTTGTTTTTAATTTTGCTTCGCTTATTTGGTGGTGGCAAAGACGAGTAA

Upstream 100 bases:

>100_bases
ATATATTTTATAAGCTTATAAACAAATTTATTCATTTAGCGTACAAGCAACCGGTTTTTTGAGACTTTTTTAATCAATAA
AACTTGCTTGAAAAAAAAAT

Downstream 100 bases:

>100_bases
CCGATCAGTTCAGTTTAGCAGAAAAAGCGGCATATTCAGTGCCGCTTTTTTATTTTATTTGCTTGTAGGTATTCGGCAAA
ATCATACCTTTGTAGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
METRPFYYNPGYSQVSADVQNRVINQVFVWMALGLALTAGTAFATASSEAMMQLVFGNPIVFFGLIIAEFGLVVGVSAAI
NRLSLAAATGLFFLYSALNGVTLASIFMVYSLGSIGGVFLVTAGTFGAMSLYGLTTKRDLTKIGSLAFMALIGIIIAGVV
NMFLHSSVLSLIVSLIGLVVFIGLTAYDTQKIKEMAAMTNDGESEGKVAVLGALSLYLDFINLFLILLRLFGGGKDE

Sequences:

>Translated_237_residues
METRPFYYNPGYSQVSADVQNRVINQVFVWMALGLALTAGTAFATASSEAMMQLVFGNPIVFFGLIIAEFGLVVGVSAAI
NRLSLAAATGLFFLYSALNGVTLASIFMVYSLGSIGGVFLVTAGTFGAMSLYGLTTKRDLTKIGSLAFMALIGIIIAGVV
NMFLHSSVLSLIVSLIGLVVFIGLTAYDTQKIKEMAAMTNDGESEGKVAVLGALSLYLDFINLFLILLRLFGGGKDE
>Mature_237_residues
METRPFYYNPGYSQVSADVQNRVINQVFVWMALGLALTAGTAFATASSEAMMQLVFGNPIVFFGLIIAEFGLVVGVSAAI
NRLSLAAATGLFFLYSALNGVTLASIFMVYSLGSIGGVFLVTAGTFGAMSLYGLTTKRDLTKIGSLAFMALIGIIIAGVV
NMFLHSSVLSLIVSLIGLVVFIGLTAYDTQKIKEMAAMTNDGESEGKVAVLGALSLYLDFINLFLILLRLFGGGKDE

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=224, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI1787004, Length=212, Percent_Identity=55.6603773584906, Blast_Score=219, Evalue=1e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25091; Mature: 25091

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRPFYYNPGYSQVSADVQNRVINQVFVWMALGLALTAGTAFATASSEAMMQLVFGNPI
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHH
VFFGLIIAEFGLVVGVSAAINRLSLAAATGLFFLYSALNGVTLASIFMVYSLGSIGGVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VTAGTFGAMSLYGLTTKRDLTKIGSLAFMALIGIIIAGVVNMFLHSSVLSLIVSLIGLVV
EECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIGLTAYDTQKIKEMAAMTNDGESEGKVAVLGALSLYLDFINLFLILLRLFGGGKDE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METRPFYYNPGYSQVSADVQNRVINQVFVWMALGLALTAGTAFATASSEAMMQLVFGNPI
CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHH
VFFGLIIAEFGLVVGVSAAINRLSLAAATGLFFLYSALNGVTLASIFMVYSLGSIGGVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
VTAGTFGAMSLYGLTTKRDLTKIGSLAFMALIGIIIAGVVNMFLHSSVLSLIVSLIGLVV
EECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIGLTAYDTQKIKEMAAMTNDGESEGKVAVLGALSLYLDFINLFLILLRLFGGGKDE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]