| Definition | Chloroherpeton thalassium ATCC 35110 chromosome, complete genome. |
|---|---|
| Accession | NC_011026 |
| Length | 3,293,456 |
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The map label for this gene is 193213823
Identifier: 193213823
GI number: 193213823
Start: 122453
End: 122803
Strand: Direct
Name: 193213823
Synonym: Ctha_0104
Alternate gene names: NA
Gene position: 122453-122803 (Clockwise)
Preceding gene: 193213822
Following gene: 193213824
Centisome position: 3.72
GC content: 45.58
Gene sequence:
>351_bases ATGAATGGAAATATGACGAATCAACCCGATAGCGAATCAAAACAGCAACCGCTTCAAATTAACATCCAGCTCGATCCAGA TACAGCACAGGGCATTTATTCCAACATTGCTGTCATCAATCATAGCCCTTCGGAATTTATTTTGGACTTCACGCGCCTTT TTCCTGGAATGCAATCGGCCAAAGTCCATGCGCGCATTGTGATGACACCGCAGCACGCCAAAATGTTAGCCAAAGCGCTT GAGCAAAACATCGCCAAATATGAATCGGATAACGGCGCCATCAAGGTGGACGAGGCTTCTCACTCCGAGCAAATGGGTTT TCACATCGCCAGAAATCTTCAGCAAAAATAA
Upstream 100 bases:
>100_bases TATAATTTTTTCGCGAACTTTTTCAGTGCAACAGGCAATCTCTCATGAGAAACGCCTTGCAAATGTTAAATTAAACTGTG AAAGTTACCCTTAAAACAAG
Downstream 100 bases:
>100_bases TTTCAGTTCAACTTTTTAGCCCAACCAAGCATGACGGAAAAAGAAATCAGAATTTTTCTTGATGAAACATTAGAAGACAT TCAAGACAAACTTGACGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNGNMTNQPDSESKQQPLQINIQLDPDTAQGIYSNIAVINHSPSEFILDFTRLFPGMQSAKVHARIVMTPQHAKMLAKAL EQNIAKYESDNGAIKVDEASHSEQMGFHIARNLQQK
Sequences:
>Translated_116_residues MNGNMTNQPDSESKQQPLQINIQLDPDTAQGIYSNIAVINHSPSEFILDFTRLFPGMQSAKVHARIVMTPQHAKMLAKAL EQNIAKYESDNGAIKVDEASHSEQMGFHIARNLQQK >Mature_116_residues MNGNMTNQPDSESKQQPLQINIQLDPDTAQGIYSNIAVINHSPSEFILDFTRLFPGMQSAKVHARIVMTPQHAKMLAKAL EQNIAKYESDNGAIKVDEASHSEQMGFHIARNLQQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12960; Mature: 12960
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGNMTNQPDSESKQQPLQINIQLDPDTAQGIYSNIAVINHSPSEFILDFTRLFPGMQSA CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCEEEEECCCHHHHHHHHHHCCCCCCC KVHARIVMTPQHAKMLAKALEQNIAKYESDNGAIKVDEASHSEQMGFHIARNLQQK EEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MNGNMTNQPDSESKQQPLQINIQLDPDTAQGIYSNIAVINHSPSEFILDFTRLFPGMQSA CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCEEEEECCCHHHHHHHHHHCCCCCCC KVHARIVMTPQHAKMLAKALEQNIAKYESDNGAIKVDEASHSEQMGFHIARNLQQK EEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA