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The map label for this gene is 193213737

Identifier: 193213737

GI number: 193213737

Start: 22702

End: 23976

Strand: Direct

Name: 193213737

Synonym: Ctha_0017

Alternate gene names: NA

Gene position: 22702-23976 (Clockwise)

Preceding gene: 193213736

Following gene: 193213738

Centisome position: 0.69

GC content: 49.96

Gene sequence:

>1275_bases
ATGATACGTAAGGAAAATCGCTCTTCAACTTCTGACTTTGAGCTAAAGCACAGCATTCCGCATTATTACACGACGGCCAT
GCGGCTGGCCAGAATTCCAAAAACAGCCCGCACCTTTGCGCTTTCCGTTTATGTGCTGCTCGTGCTTATTGTTCTTGGCC
TGATTTTTATTCCTTGGCAACAAAACGTGATTGGCTCTGGCACGGTCACTTCGTTTGTTCCCAATGCTCGCCCACAGTCC
ATCGACGCGCAAATCGACGGACGCATTGTCAAGTGGTTTGTCAATGAAGGCGCGCCGGTTGCAGCGGGCGATACCATTGC
TGTTCTGCGCGACATCGATACAAAGTTTTTGGATACCAACTTTGTGGAAAAAAATGCCATCATTCGCGAAAACACCGCGA
AAGAGCAAGAGCTTTCCGTGATTGCCGCTGAGCAAAAAGTCATTCAAGCGCGGCAAAAACATCTTTCCGCCATTGCCCAA
CGTGAAAATACAAAAGTTGGCACGGCAACTGCTCGCATTCAATACAATCGGGCGCTCGCGCTCGAATCCGAAGGCTTAAT
TCCACGAAAAGATCTGGAGCTATCGCTGCTCAAATACCAAAAAGCCATTTCGGATTCCATTAAGGCAGAAGCTGAATTGA
GCATCGCGCTGAGAACGATTTACGCGGCAGAAGCGGAACGCAACGCCAAAGAACGCAAAGCCAATGCGATAATTGCCAAA
GCTGAACTCGAATTTGGAAATGTTAGCCAGCGAAAAAATGCCGGCGTTGTGATTGCGCCAATTGATGGAACGGTGGTTAG
AATTTCTCAAGCAGGACCTGGCCAAACGGTGAAAAAGGGTTCGCAACTTGCCATTATCGCGCCCGAAACCGACGACATTG
CGGCTGAAATTATGGTTGGCAGTTTAGATGCGGCGCTCATTTCACCTGGCCGTCCGGCGAGAATGCAATTTGCTGGTTTT
CCAGCGATTCAATTTTCTGGCTGGCCAGATATGTCGCTCGGCACTTTCGGCGGAACGGTGGCGGTCATCGACGCCGTAGA
TGATGGCACAGGGCGCTACCGCGTGCTGATTGTTCCTGACCAAAACGATAGAGCTTGGCCGGATAGAACGTTCCTTCGGC
AAGGGACGGAAGTGACGGGTTGGGTGCTTTTAAATGAAGTGCCTCTCGGCTACGAGTTCTGGCGCATCATGAATGGCTTC
CCGCCAATTGTGCCAGTCAAAACAAACCCGAAAAGCCACAAAGACGCAAAAAAAACAACCAAGGGAGAAAAATAG

Upstream 100 bases:

>100_bases
ACAGGCTACTTAATCCACGCAAAACACCATTTTGGATCGATTAAAAATTAACTCGCAAAAATAACTTTGAACTTATACAA
GAAGTCCGCTTCATCTAATT

Downstream 100 bases:

>100_bases
CAGTGCTTCTGAAAAAACTTCAGCGATTCAAACCGGTTTCTTTTTTCATTACTGTTTTTTGCGTGTCGTTTTCGCCAACC
GCATCTGCGCAAGTAGCCGA

Product: HlyD family secretion protein

Products: NA

Alternate protein names: Secretion Protein HlyD; Secretion Protein HlyD Family Protein; Outer Membrane Efflux Protein; Multidrug Resistance Efflux Pump-Like Protein; HlyD Family Secretion Protein; Membrane Fusion Protein; Efflux Transporter Membrane Fusion Protein; Signal Peptide; Xin Secretion Protein; ABC Transporter Membrane Fusion Efflux Protein; Secretion Protein; RND Efflux Membrane Fusion Proteins; Biotin/Lipoyl Attachment Domain-Containing Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MIRKENRSSTSDFELKHSIPHYYTTAMRLARIPKTARTFALSVYVLLVLIVLGLIFIPWQQNVIGSGTVTSFVPNARPQS
IDAQIDGRIVKWFVNEGAPVAAGDTIAVLRDIDTKFLDTNFVEKNAIIRENTAKEQELSVIAAEQKVIQARQKHLSAIAQ
RENTKVGTATARIQYNRALALESEGLIPRKDLELSLLKYQKAISDSIKAEAELSIALRTIYAAEAERNAKERKANAIIAK
AELEFGNVSQRKNAGVVIAPIDGTVVRISQAGPGQTVKKGSQLAIIAPETDDIAAEIMVGSLDAALISPGRPARMQFAGF
PAIQFSGWPDMSLGTFGGTVAVIDAVDDGTGRYRVLIVPDQNDRAWPDRTFLRQGTEVTGWVLLNEVPLGYEFWRIMNGF
PPIVPVKTNPKSHKDAKKTTKGEK

Sequences:

>Translated_424_residues
MIRKENRSSTSDFELKHSIPHYYTTAMRLARIPKTARTFALSVYVLLVLIVLGLIFIPWQQNVIGSGTVTSFVPNARPQS
IDAQIDGRIVKWFVNEGAPVAAGDTIAVLRDIDTKFLDTNFVEKNAIIRENTAKEQELSVIAAEQKVIQARQKHLSAIAQ
RENTKVGTATARIQYNRALALESEGLIPRKDLELSLLKYQKAISDSIKAEAELSIALRTIYAAEAERNAKERKANAIIAK
AELEFGNVSQRKNAGVVIAPIDGTVVRISQAGPGQTVKKGSQLAIIAPETDDIAAEIMVGSLDAALISPGRPARMQFAGF
PAIQFSGWPDMSLGTFGGTVAVIDAVDDGTGRYRVLIVPDQNDRAWPDRTFLRQGTEVTGWVLLNEVPLGYEFWRIMNGF
PPIVPVKTNPKSHKDAKKTTKGEK
>Mature_424_residues
MIRKENRSSTSDFELKHSIPHYYTTAMRLARIPKTARTFALSVYVLLVLIVLGLIFIPWQQNVIGSGTVTSFVPNARPQS
IDAQIDGRIVKWFVNEGAPVAAGDTIAVLRDIDTKFLDTNFVEKNAIIRENTAKEQELSVIAAEQKVIQARQKHLSAIAQ
RENTKVGTATARIQYNRALALESEGLIPRKDLELSLLKYQKAISDSIKAEAELSIALRTIYAAEAERNAKERKANAIIAK
AELEFGNVSQRKNAGVVIAPIDGTVVRISQAGPGQTVKKGSQLAIIAPETDDIAAEIMVGSLDAALISPGRPARMQFAGF
PAIQFSGWPDMSLGTFGGTVAVIDAVDDGTGRYRVLIVPDQNDRAWPDRTFLRQGTEVTGWVLLNEVPLGYEFWRIMNGF
PPIVPVKTNPKSHKDAKKTTKGEK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46514; Mature: 46514

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKENRSSTSDFELKHSIPHYYTTAMRLARIPKTARTFALSVYVLLVLIVLGLIFIPWQ
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QNVIGSGTVTSFVPNARPQSIDAQIDGRIVKWFVNEGAPVAAGDTIAVLRDIDTKFLDTN
CCCCCCCCHHHCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCCCEEEEECCCHHHHCCC
FVEKNAIIRENTAKEQELSVIAAEQKVIQARQKHLSAIAQRENTKVGTATARIQYNRALA
CHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECEEEE
LESEGLIPRKDLELSLLKYQKAISDSIKAEAELSIALRTIYAAEAERNAKERKANAIIAK
ECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEEHHHHHHHHHCCHHHHHHCEEEEE
AELEFGNVSQRKNAGVVIAPIDGTVVRISQAGPGQTVKKGSQLAIIAPETDDIAAEIMVG
EEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHCCCEEEEECCCCCCCEEHEEEE
SLDAALISPGRPARMQFAGFPAIQFSGWPDMSLGTFGGTVAVIDAVDDGTGRYRVLIVPD
CCCHHHCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEC
QNDRAWPDRTFLRQGTEVTGWVLLNEVPLGYEFWRIMNGFPPIVPVKTNPKSHKDAKKTT
CCCCCCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHC
KGEK
CCCC
>Mature Secondary Structure
MIRKENRSSTSDFELKHSIPHYYTTAMRLARIPKTARTFALSVYVLLVLIVLGLIFIPWQ
CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
QNVIGSGTVTSFVPNARPQSIDAQIDGRIVKWFVNEGAPVAAGDTIAVLRDIDTKFLDTN
CCCCCCCCHHHCCCCCCCCCCCCEECCEEEEEEECCCCCCCCCCCEEEEECCCHHHHCCC
FVEKNAIIRENTAKEQELSVIAAEQKVIQARQKHLSAIAQRENTKVGTATARIQYNRALA
CHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECEEEE
LESEGLIPRKDLELSLLKYQKAISDSIKAEAELSIALRTIYAAEAERNAKERKANAIIAK
ECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEEHHHHHHHHHCCHHHHHHCEEEEE
AELEFGNVSQRKNAGVVIAPIDGTVVRISQAGPGQTVKKGSQLAIIAPETDDIAAEIMVG
EEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHCCCEEEEECCCCCCCEEHEEEE
SLDAALISPGRPARMQFAGFPAIQFSGWPDMSLGTFGGTVAVIDAVDDGTGRYRVLIVPD
CCCHHHCCCCCCCEEEECCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEC
QNDRAWPDRTFLRQGTEVTGWVLLNEVPLGYEFWRIMNGFPPIVPVKTNPKSHKDAKKTT
CCCCCCCCHHHHHCCCCEEEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCCCCHHHHHC
KGEK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA