| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213217
Identifier: 193213217
GI number: 193213217
Start: 1720987
End: 1721637
Strand: Direct
Name: 193213217
Synonym: Cpar_1572
Alternate gene names: NA
Gene position: 1720987-1721637 (Clockwise)
Preceding gene: 193213216
Following gene: 193213222
Centisome position: 75.18
GC content: 56.22
Gene sequence:
>651_bases ATGACGCGCGACAACGACCGCCAGATGAAAGCCATCATCCTTTATGACAGCCGCTCCAGCGGAGGCTCAACCGACCGACT GATCGACTCTATCGGCCAGCAGCTCGCCGAAAACGGTGCCTATGTCGAAAAAGCCCGCTGCAAGGCGAACGCCGATTACA GCTTTATACGTGAGTTCGATGTGGTAATCATGGGCGCGCCCGTCTATTACATGGTGGTCTCTTCGCAGTTGCTCGGCGCA TTGTTGCAGAGCAACCTGAAGCGCTACCTCAGGCACAAAAATATCGCTCTGTTCCTGACCTGCGGAAGCCCCGAAGCGAT GGCGCAGTCGGTCTATATGCCGCAGCTCAAGATTCACCTGATGCGCAATCGCATTCTGAGCGAAAAGATCATCGCCCCGC ATCAGATCGACGATGAAGATGTGATTTACGATTTCGTGGAAGAGATCGAAGAGGGTTACCGCAAAAGCTTCAAGCCGCGC GGCGGCGACCTCCAGTGGAGCGATGAGGCGCTCGAACTGATCGAAAGCGCACCGCCGTTTTTCAGCGACAAAATCAAGGC CGCGCTCGTCGCTTACGCCGAAGAGAACGGCATCAGGTACATCACCCCCGAAGTGCTCGACGATGCCAGGGCCAGCCCAA AAGGCATGTGA
Upstream 100 bases:
>100_bases TTCGCACCCGATCAGACCGGCGACCAGCAAGTTATTGCTGAATTCGTCAACAGCATCACGGAAGCCTACGGCAAGACACA CTGACTCAATACAACTTTTT
Downstream 100 bases:
>100_bases GCCTTACCTGAAAAAGAGACACAAAAAAGCCGGCGATTTTACAACCGCCGGCTTTTTTATTGACAGACCAAAGAGGGCCA GAGATTATCCGAAGATGTCC
Product: Proto-chlorophyllide reductase 57 kD subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MTRDNDRQMKAIILYDSRSSGGSTDRLIDSIGQQLAENGAYVEKARCKANADYSFIREFDVVIMGAPVYYMVVSSQLLGA LLQSNLKRYLRHKNIALFLTCGSPEAMAQSVYMPQLKIHLMRNRILSEKIIAPHQIDDEDVIYDFVEEIEEGYRKSFKPR GGDLQWSDEALELIESAPPFFSDKIKAALVAYAEENGIRYITPEVLDDARASPKGM
Sequences:
>Translated_216_residues MTRDNDRQMKAIILYDSRSSGGSTDRLIDSIGQQLAENGAYVEKARCKANADYSFIREFDVVIMGAPVYYMVVSSQLLGA LLQSNLKRYLRHKNIALFLTCGSPEAMAQSVYMPQLKIHLMRNRILSEKIIAPHQIDDEDVIYDFVEEIEEGYRKSFKPR GGDLQWSDEALELIESAPPFFSDKIKAALVAYAEENGIRYITPEVLDDARASPKGM >Mature_215_residues TRDNDRQMKAIILYDSRSSGGSTDRLIDSIGQQLAENGAYVEKARCKANADYSFIREFDVVIMGAPVYYMVVSSQLLGAL LQSNLKRYLRHKNIALFLTCGSPEAMAQSVYMPQLKIHLMRNRILSEKIIAPHQIDDEDVIYDFVEEIEEGYRKSFKPRG GDLQWSDEALELIESAPPFFSDKIKAALVAYAEENGIRYITPEVLDDARASPKGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24423; Mature: 24292
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRDNDRQMKAIILYDSRSSGGSTDRLIDSIGQQLAENGAYVEKARCKANADYSFIREFD CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHC VVIMGAPVYYMVVSSQLLGALLQSNLKRYLRHKNIALFLTCGSPEAMAQSVYMPQLKIHL EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHCCHHHHHHH MRNRILSEKIIAPHQIDDEDVIYDFVEEIEEGYRKSFKPRGGDLQWSDEALELIESAPPF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC FSDKIKAALVAYAEENGIRYITPEVLDDARASPKGM HHHHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCC >Mature Secondary Structure TRDNDRQMKAIILYDSRSSGGSTDRLIDSIGQQLAENGAYVEKARCKANADYSFIREFD CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHC VVIMGAPVYYMVVSSQLLGALLQSNLKRYLRHKNIALFLTCGSPEAMAQSVYMPQLKIHL EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHCCHHHHHHH MRNRILSEKIIAPHQIDDEDVIYDFVEEIEEGYRKSFKPRGGDLQWSDEALELIESAPPF HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC FSDKIKAALVAYAEENGIRYITPEVLDDARASPKGM HHHHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA