| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212853
Identifier: 193212853
GI number: 193212853
Start: 1315092
End: 1315691
Strand: Direct
Name: 193212853
Synonym: Cpar_1200
Alternate gene names: NA
Gene position: 1315092-1315691 (Clockwise)
Preceding gene: 193212844
Following gene: 193212863
Centisome position: 57.45
GC content: 58.5
Gene sequence:
>600_bases ATGAGCGCGACCGAAACAAAAACGACCTGCCGTTACATCATCACCGGCGGGCCGGGCAGTGGCAAAAGCACGCTTATCGC CAGGCTCGAACAGCACGGCCACCGCTGCTATGCAGAAGTGTCACGCGAGCTGATCCGCCGCGAAGCCCAGCGTCCGAACG GCGTAATGCCTTGGAACGACCTCGAAGCCTTCGCCAGCCTCGCCTTCGAAGAAATGCTCCGCCAGCACAACCACGCCGCA GCAACTGGCGAGCTCTGCTTTTTCGACCGAGGCCTTCCCGACATCTTCGGCTACCTCCACGAGAGCGGCCTCGACATCCC CGAAGCATGGCTCGACACCCACAACCGGTGCCGATACGAGCGCACGGTCTTTATCCTCCCCCCGTGGACTGAAATCTATA TCAACGACACCGAACGCCCCCAAAGCCTCGCAGAAGCCGAAGCGCTCCACCACGCCATCCGCGCGGTGTACGAATCGCTG GGATACAAACTCATTGAAGTACCGAAAGTGCCGGTCGATGAACGGTGCGAGTTTGTGCTGGAGAATTTGAAAGGAGAAAA ACGAGGATTTTCGGCTTTATGCCAACACGAAACGACGTAA
Upstream 100 bases:
>100_bases AAAGCCATTATGCGGTTTTTCGATAACAAATTTGAGCGAACATTCTTTGCCGAAAAAAGCTCGACATGATCGCCAACTGG TTCCCTGTTCTGACGCTGGC
Downstream 100 bases:
>100_bases AGGGCTCTTACAGCAACACCTCAATAGAGCGACTGTAACGAGCAGCGATAAAATGAAGTGAAGCTCTGAATCACGCAACG ATCAATTCTTTTGCTGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MSATETKTTCRYIITGGPGSGKSTLIARLEQHGHRCYAEVSRELIRREAQRPNGVMPWNDLEAFASLAFEEMLRQHNHAA ATGELCFFDRGLPDIFGYLHESGLDIPEAWLDTHNRCRYERTVFILPPWTEIYINDTERPQSLAEAEALHHAIRAVYESL GYKLIEVPKVPVDERCEFVLENLKGEKRGFSALCQHETT
Sequences:
>Translated_199_residues MSATETKTTCRYIITGGPGSGKSTLIARLEQHGHRCYAEVSRELIRREAQRPNGVMPWNDLEAFASLAFEEMLRQHNHAA ATGELCFFDRGLPDIFGYLHESGLDIPEAWLDTHNRCRYERTVFILPPWTEIYINDTERPQSLAEAEALHHAIRAVYESL GYKLIEVPKVPVDERCEFVLENLKGEKRGFSALCQHETT >Mature_198_residues SATETKTTCRYIITGGPGSGKSTLIARLEQHGHRCYAEVSRELIRREAQRPNGVMPWNDLEAFASLAFEEMLRQHNHAAA TGELCFFDRGLPDIFGYLHESGLDIPEAWLDTHNRCRYERTVFILPPWTEIYINDTERPQSLAEAEALHHAIRAVYESLG YKLIEVPKVPVDERCEFVLENLKGEKRGFSALCQHETT
Specific function: Unknown
COG id: COG3911
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22719; Mature: 22588
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATETKTTCRYIITGGPGSGKSTLIARLEQHGHRCYAEVSRELIRREAQRPNGVMPWND CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LEAFASLAFEEMLRQHNHAAATGELCFFDRGLPDIFGYLHESGLDIPEAWLDTHNRCRYE HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHCHHHCCCCC RTVFILPPWTEIYINDTERPQSLAEAEALHHAIRAVYESLGYKLIEVPKVPVDERCEFVL CEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH ENLKGEKRGFSALCQHETT HHHCCCHHHHHHHHCCCCC >Mature Secondary Structure SATETKTTCRYIITGGPGSGKSTLIARLEQHGHRCYAEVSRELIRREAQRPNGVMPWND CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH LEAFASLAFEEMLRQHNHAAATGELCFFDRGLPDIFGYLHESGLDIPEAWLDTHNRCRYE HHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCHHHHCHHHCCCCC RTVFILPPWTEIYINDTERPQSLAEAEALHHAIRAVYESLGYKLIEVPKVPVDERCEFVL CEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHH ENLKGEKRGFSALCQHETT HHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA