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The map label for this gene is 193212820

Identifier: 193212820

GI number: 193212820

Start: 1282547

End: 1283017

Strand: Direct

Name: 193212820

Synonym: Cpar_1167

Alternate gene names: NA

Gene position: 1282547-1283017 (Clockwise)

Preceding gene: 193212816

Following gene: 193212840

Centisome position: 56.02

GC content: 58.81

Gene sequence:

>471_bases
ATGACACCACTTCTCTTTTTTATAGCGACCATCATCTTCGCCGCCGGGGCGGCTGCGGGCGCGGTTGCCGTCAACGTTCT
CCGCAAAAAGCAGGACGGAATCTGCCGCGGCAGCGTGCGCATCGGTCCATCGACGGTCGCCGGACGCGGCGCATTTGCGC
TCAAAGCGATCAACGAAGGCGACATCATCGAGCGCTGCCCGGCGCTTGAAGTGAACGAAAAAGACATCGGCGGCGAACTC
TACAACTACGTCTTTTACGGCAGCGACGAAACCCGCAGACTCGTGGCCATGGGCTACGGCATGATGTTCAACCACTCCTC
GACCCCCAACGTCGCCTACTACCGCGAAGACACCCCAACCGGCACCGAGCTGGTGCTCTACGCCCTGCGCAACATCAGCG
AAGGCGAAGAGATGTACTACAACTACGGCGACGAATGGTGGAGTTCAAGAGGCGAAAAGGCAGATTTTTGA

Upstream 100 bases:

>100_bases
ACTCCGCCGGAGAAAACATTCCTGAATGCTCCGGCATCCGCTCGATGGATTCAGCCGCGAGATTTGTATTTTCAGCTTTT
CCATCGACAGCCGGAATCGC

Downstream 100 bases:

>100_bases
CAGTTGACAGTTGACAGTTGACAGTTGACAGTTGACAGTTGACAGTTGACAGTTGACTATGGGAAATTGAATTTTTGAGC
GCAACGAATCAAGGAAGGCC

Product: nuclear protein SET

Products: NA

Alternate protein names: Methyltransferase

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTPLLFFIATIIFAAGAAAGAVAVNVLRKKQDGICRGSVRIGPSTVAGRGAFALKAINEGDIIERCPALEVNEKDIGGEL
YNYVFYGSDETRRLVAMGYGMMFNHSSTPNVAYYREDTPTGTELVLYALRNISEGEEMYYNYGDEWWSSRGEKADF

Sequences:

>Translated_156_residues
MTPLLFFIATIIFAAGAAAGAVAVNVLRKKQDGICRGSVRIGPSTVAGRGAFALKAINEGDIIERCPALEVNEKDIGGEL
YNYVFYGSDETRRLVAMGYGMMFNHSSTPNVAYYREDTPTGTELVLYALRNISEGEEMYYNYGDEWWSSRGEKADF
>Mature_155_residues
TPLLFFIATIIFAAGAAAGAVAVNVLRKKQDGICRGSVRIGPSTVAGRGAFALKAINEGDIIERCPALEVNEKDIGGELY
NYVFYGSDETRRLVAMGYGMMFNHSSTPNVAYYREDTPTGTELVLYALRNISEGEEMYYNYGDEWWSSRGEKADF

Specific function: Unknown

COG id: COG2940

COG function: function code R; Proteins containing SET domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17204; Mature: 17072

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS50280 SET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLLFFIATIIFAAGAAAGAVAVNVLRKKQDGICRGSVRIGPSTVAGRGAFALKAINEG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCEEECCCCCCCCCEEEEEECCCC
DIIERCPALEVNEKDIGGELYNYVFYGSDETRRLVAMGYGMMFNHSSTPNVAYYREDTPT
CHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEECCCCCCCEEEEECCCCC
GTELVLYALRNISEGEEMYYNYGDEWWSSRGEKADF
HHHHHHHHHHCCCCCHHHEECCCHHHHHCCCCCCCC
>Mature Secondary Structure 
TPLLFFIATIIFAAGAAAGAVAVNVLRKKQDGICRGSVRIGPSTVAGRGAFALKAINEG
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEECCEEECCCCCCCCCEEEEEECCCC
DIIERCPALEVNEKDIGGELYNYVFYGSDETRRLVAMGYGMMFNHSSTPNVAYYREDTPT
CHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCEEECCCCCCCEEEEECCCCC
GTELVLYALRNISEGEEMYYNYGDEWWSSRGEKADF
HHHHHHHHHHCCCCCHHHEECCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA