| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212812
Identifier: 193212812
GI number: 193212812
Start: 1274287
End: 1275216
Strand: Direct
Name: 193212812
Synonym: Cpar_1159
Alternate gene names: NA
Gene position: 1274287-1275216 (Clockwise)
Preceding gene: 193212811
Following gene: 193212816
Centisome position: 55.66
GC content: 56.24
Gene sequence:
>930_bases ATGACCTCTTTCAACACCAAATATGGCGAGCTCAAAGGCGTCGAATTCAGAACACTCTATTCGAATGGCAAAACCGACGG CTGCCTTGTCCAGGAGGAGAATGTGCTCAGCACACCCTACGGAGAGCTGATTCCGCAGTACGAGGCAGAAGACATGGGGC GCCGCCAGCTTAAACCTTTTTATTTCTATAAGAACGGCGCCATCAAATCGGTAGCGCTACAGACCCAAACCCTTCTTCGC ACGCCGGTCGGAGGCATTCCTGCCGAGCTGGTCACCTTTTACGAATCGGGCAGTGTCAAGCGGGTTTTCCCGCTCGATGG CAAGCTCAGTGGCTTCTGGACGGCCAAAAACGAGTTTGAACTGGCTGAAGAGATGACCGTCGAATCGCCGATCGGCAGCC TTCGCGCCAAGTTCATCGCCATCCAGTTTTACGAAAGCGGCGCTCTAAAGAGCCTGACCCTGTGGCCGGGCGAGTTCCTG ACGCTGATGACGCCGGCAGGTCAGATCAGGGTTCGCACGGGTATTGCATTCTACGAGGACGGCGCGATCCGCTCGCTCGA ACCGGCAGGCGTGGTACAGGTCGAAACGCCCATTGGCACCATGACCGCTTATGACAACGATCCGCAGGGTGTGCATGGCG ACCTCAATTCGCTCCAGTTCAGCCCGGAAGGCACCGTTATGGCACTCAAAACCATCGCAGAAGAGATCACCGTAACCGAT CAGCTTGGCAACGCACACCGCTTCGCCCCCAGCCTGAAGGACAACACCTGCGGCGTCGAGCGCAAAATCGTGGTACCGAT GAAAGTAAGGTTCAGCGAGGGAAGAATAGTGTTCGAAGACCGACAGGAGTCGTTCAATCTCCAGCAGTGCAAAATCGAAG TTAGGCCTTACGACCGCAAAGGCGACCCAGCATACTCCTGCGCGGGCTAA
Upstream 100 bases:
>100_bases CGCTTCAATAGTTTAGAACAAAAGCATTCTTCGCTGGCACAGTAATTGCATATAACAATACAAGAAAGGCACATTTCCAC GGCACAAAAAAGGACTAATT
Downstream 100 bases:
>100_bases GCGGGTTCGGTTCCGAACAATGCCTGGGTGGCTTCCAGACCGGCCACCCAGCCTGTTGAAAATGCTGCTTGCAGGTTGAA ACCACCCACCTCGCCCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTSFNTKYGELKGVEFRTLYSNGKTDGCLVQEENVLSTPYGELIPQYEAEDMGRRQLKPFYFYKNGAIKSVALQTQTLLR TPVGGIPAELVTFYESGSVKRVFPLDGKLSGFWTAKNEFELAEEMTVESPIGSLRAKFIAIQFYESGALKSLTLWPGEFL TLMTPAGQIRVRTGIAFYEDGAIRSLEPAGVVQVETPIGTMTAYDNDPQGVHGDLNSLQFSPEGTVMALKTIAEEITVTD QLGNAHRFAPSLKDNTCGVERKIVVPMKVRFSEGRIVFEDRQESFNLQQCKIEVRPYDRKGDPAYSCAG
Sequences:
>Translated_309_residues MTSFNTKYGELKGVEFRTLYSNGKTDGCLVQEENVLSTPYGELIPQYEAEDMGRRQLKPFYFYKNGAIKSVALQTQTLLR TPVGGIPAELVTFYESGSVKRVFPLDGKLSGFWTAKNEFELAEEMTVESPIGSLRAKFIAIQFYESGALKSLTLWPGEFL TLMTPAGQIRVRTGIAFYEDGAIRSLEPAGVVQVETPIGTMTAYDNDPQGVHGDLNSLQFSPEGTVMALKTIAEEITVTD QLGNAHRFAPSLKDNTCGVERKIVVPMKVRFSEGRIVFEDRQESFNLQQCKIEVRPYDRKGDPAYSCAG >Mature_308_residues TSFNTKYGELKGVEFRTLYSNGKTDGCLVQEENVLSTPYGELIPQYEAEDMGRRQLKPFYFYKNGAIKSVALQTQTLLRT PVGGIPAELVTFYESGSVKRVFPLDGKLSGFWTAKNEFELAEEMTVESPIGSLRAKFIAIQFYESGALKSLTLWPGEFLT LMTPAGQIRVRTGIAFYEDGAIRSLEPAGVVQVETPIGTMTAYDNDPQGVHGDLNSLQFSPEGTVMALKTIAEEITVTDQ LGNAHRFAPSLKDNTCGVERKIVVPMKVRFSEGRIVFEDRQESFNLQQCKIEVRPYDRKGDPAYSCAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34319; Mature: 34188
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFNTKYGELKGVEFRTLYSNGKTDGCLVQEENVLSTPYGELIPQYEAEDMGRRQLKPF CCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHCCCCCHHHCHHHHCCCE YFYKNGAIKSVALQTQTLLRTPVGGIPAELVTFYESGSVKRVFPLDGKLSGFWTAKNEFE EEEECCCEEEEEHHHHHHHHCCCCCCCHHHHEEECCCCEEEEEECCCCCCEEEECCCHHH LAEEMTVESPIGSLRAKFIAIQFYESGALKSLTLWPGEFLTLMTPAGQIRVRTGIAFYED HHHHHHHHCCHHHHEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEECEEEEEC GAIRSLEPAGVVQVETPIGTMTAYDNDPQGVHGDLNSLQFSPEGTVMALKTIAEEITVTD CCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHEEECCCCCEEEHHHHHHHHEEEC QLGNAHRFAPSLKDNTCGVERKIVVPMKVRFSEGRIVFEDRQESFNLQQCKIEVRPYDRK CCCCCHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCC GDPAYSCAG CCCCCCCCC >Mature Secondary Structure TSFNTKYGELKGVEFRTLYSNGKTDGCLVQEENVLSTPYGELIPQYEAEDMGRRQLKPF CCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCHHHHCCCCCHHHCHHHHCCCE YFYKNGAIKSVALQTQTLLRTPVGGIPAELVTFYESGSVKRVFPLDGKLSGFWTAKNEFE EEEECCCEEEEEHHHHHHHHCCCCCCCHHHHEEECCCCEEEEEECCCCCCEEEECCCHHH LAEEMTVESPIGSLRAKFIAIQFYESGALKSLTLWPGEFLTLMTPAGQIRVRTGIAFYED HHHHHHHHCCHHHHEEEEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEECEEEEEC GAIRSLEPAGVVQVETPIGTMTAYDNDPQGVHGDLNSLQFSPEGTVMALKTIAEEITVTD CCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCHHEEECCCCCEEEHHHHHHHHEEEC QLGNAHRFAPSLKDNTCGVERKIVVPMKVRFSEGRIVFEDRQESFNLQQCKIEVRPYDRK CCCCCHHCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCEEEEEEEEECCCCC GDPAYSCAG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA