| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212757
Identifier: 193212757
GI number: 193212757
Start: 1222519
End: 1223262
Strand: Direct
Name: 193212757
Synonym: Cpar_1103
Alternate gene names: NA
Gene position: 1222519-1223262 (Clockwise)
Preceding gene: 193212756
Following gene: 193212758
Centisome position: 53.4
GC content: 41.13
Gene sequence:
>744_bases ATGAGACGAGATATGAAGAAACGAACTAATAACTTGTTAGCCGTCTGGAGGTTACAATTTAATATGAAAAATACTGACTA CTATCCTCCGGTTCTTGGTAAGGGAGAATATCATTGCCCCCATTGCAACGTGTATGCAAAACAATTCTATGGACACGTGC ATGCAATCTCCAATTTTGGCTGGGAAAGCATCGTAGATCAGCAATCGAAGTTCAATGAACCTCTTACAAAAGACTGGATT GTTACAAAGTGTCAACACTGCAACGGGATTTCAGTTTGGCATGACAACAACATGCTATACCCCAAGAAAATATTACCACC ACCTCCTAATTCTGATTTGTCCGATGAAATAAAAGCAGATTACTTGGAAGCCGCCAATATTCTTGGTGACTCACCTAGAG CAGCAGGAGCTCTTCTAAGGCTGAGTTTGCAAAAGCTCTGTGTGCAACTCGGTGAAAAGGGAGAAAACATAAATTCTGAT ATAAAGAGTCTCGTTGCGAAAGGTCTAAATCCCCTCGTCCAAAAGTCCTTGGATGCACTAAGAATTACTGGAAACAATGC GGTACATCCTGGTGAAATAAACCTTTCGGAGGAACCTGATCGAGTTCTGAAACTATTTGGTCTTATAAACTTTATTGCTG ACAAAATGATCACAGAGCCAAAAGAAATAGAGAGCTTCTACGATGATCTGCCTTCTGGTGCGCTTGATGCAGTTGAGAAA CGAGACAATTCGGCTAACAAGTAG
Upstream 100 bases:
>100_bases ATATCCATAAAAGTGGAATTTAAAACTTTCTTGATTTTACTCAACTTTTATGGTATTTTTTTAACGGGTTTGATTACAGA AGACTGTTGATGAGCGTCAC
Downstream 100 bases:
>100_bases CTCCACCGGAAAAAATACTCGCTGTGCTCGCATTTTCCCGATGAGCTAGGCGTTATGTTTTAAAGGGAGGTAGTATATGT ATCTCAAAGAACTGCTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRRDMKKRTNNLLAVWRLQFNMKNTDYYPPVLGKGEYHCPHCNVYAKQFYGHVHAISNFGWESIVDQQSKFNEPLTKDWI VTKCQHCNGISVWHDNNMLYPKKILPPPPNSDLSDEIKADYLEAANILGDSPRAAGALLRLSLQKLCVQLGEKGENINSD IKSLVAKGLNPLVQKSLDALRITGNNAVHPGEINLSEEPDRVLKLFGLINFIADKMITEPKEIESFYDDLPSGALDAVEK RDNSANK
Sequences:
>Translated_247_residues MRRDMKKRTNNLLAVWRLQFNMKNTDYYPPVLGKGEYHCPHCNVYAKQFYGHVHAISNFGWESIVDQQSKFNEPLTKDWI VTKCQHCNGISVWHDNNMLYPKKILPPPPNSDLSDEIKADYLEAANILGDSPRAAGALLRLSLQKLCVQLGEKGENINSD IKSLVAKGLNPLVQKSLDALRITGNNAVHPGEINLSEEPDRVLKLFGLINFIADKMITEPKEIESFYDDLPSGALDAVEK RDNSANK >Mature_247_residues MRRDMKKRTNNLLAVWRLQFNMKNTDYYPPVLGKGEYHCPHCNVYAKQFYGHVHAISNFGWESIVDQQSKFNEPLTKDWI VTKCQHCNGISVWHDNNMLYPKKILPPPPNSDLSDEIKADYLEAANILGDSPRAAGALLRLSLQKLCVQLGEKGENINSD IKSLVAKGLNPLVQKSLDALRITGNNAVHPGEINLSEEPDRVLKLFGLINFIADKMITEPKEIESFYDDLPSGALDAVEK RDNSANK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27860; Mature: 27860
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDMKKRTNNLLAVWRLQFNMKNTDYYPPVLGKGEYHCPHCNVYAKQFYGHVHAISNFG CCCHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC WESIVDQQSKFNEPLTKDWIVTKCQHCNGISVWHDNNMLYPKKILPPPPNSDLSDEIKAD HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHH YLEAANILGDSPRAAGALLRLSLQKLCVQLGEKGENINSDIKSLVAKGLNPLVQKSLDAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHE RITGNNAVHPGEINLSEEPDRVLKLFGLINFIADKMITEPKEIESFYDDLPSGALDAVEK EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH RDNSANK CCCCCCC >Mature Secondary Structure MRRDMKKRTNNLLAVWRLQFNMKNTDYYPPVLGKGEYHCPHCNVYAKQFYGHVHAISNFG CCCHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC WESIVDQQSKFNEPLTKDWIVTKCQHCNGISVWHDNNMLYPKKILPPPPNSDLSDEIKAD HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHH YLEAANILGDSPRAAGALLRLSLQKLCVQLGEKGENINSDIKSLVAKGLNPLVQKSLDAL HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHE RITGNNAVHPGEINLSEEPDRVLKLFGLINFIADKMITEPKEIESFYDDLPSGALDAVEK EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHH RDNSANK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA