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The map label for this gene is atpF1 [H]

Identifier: 193212725

GI number: 193212725

Start: 1177085

End: 1177867

Strand: Direct

Name: atpF1 [H]

Synonym: Cpar_1070

Alternate gene names: 193212725

Gene position: 1177085-1177867 (Clockwise)

Preceding gene: 193212724

Following gene: 193212726

Centisome position: 51.42

GC content: 60.79

Gene sequence:

>783_bases
ATGCTGATCGACTGGTTCACGGTTGTAGCGCAGCTCGTCAATTTTCTGATCCTGATCTGGCTGCTGAAGCGCTTTCTCTA
CCAGCCGGTGCTGAAAGCGCTCGACGAGCGGGAAATAAAGATCGCCACCGAGCTTGAACACGCCGCGAGCGTCGAAGCCG
AGGCCTCTCGCGAGAAGGCCGAGTGGCAGAAGAAGAACGACGAGTTTGCGCAGCAGCGCCAGCAGATGATGAAACAGGCA
ACGGACGAGGCCACGACCCGGCGCAGCGAGCTGCTCGACGAGGCGCGACAGGAATACGACGCGCTTCATTCGAGACTGCT
CGAAACCCTGAAGCGCGAAGAAGCCGAGCGGCAGGAGGAGGCCGAACGGCGAGTAAGCGACGAAATCTTTTCGGTGGCCG
GAAAGCTGCTGACCGAGCTCGCCGACGAGTCGCTCGAATCGCGGATTATCGACAAGTTCTGCCGCAAGCTCGAAGCGGGC
GGCCCGGAGATTGCCGGACAACTCGAAGGACAAAACGGCGCAGCGAAGCAGGCCATCGTGCGCAGCACCTTCCCGCTCAC
GCCGGAGCAGCGTGAAAAGGTGAGCGGCACGATAACGACGTTGCTCGGCGTGGAGACTCCCCTTTCATTCGAGCAATCGG
ATAAAGCCGGATGCGGCATCGAGCTGTGCGTGGATGGCTTGTGCATTTCGTGGCACTTCCAGGCGGCGCTAGACGCGCTG
AAGCGAGCCGCCGACGAGTACCGTGATCGTGAAACGGATAACGGAGCGGCGGATGCCAGATAA

Upstream 100 bases:

>100_bases
TGATCGAATCGATCGCGATCTACTGCTTCGTGATTTCGATCATCCTGATCTTCGCCAATCCGTTTTGGAACCACGCAATT
GCTCAAGTTGGAGGCCACTA

Downstream 100 bases:

>100_bases
AAGCGGACATCCTCTGGACAAGGCACTCGACAGTGTCCGGCAGGCACGCGAAGGGTGGTCGGCTGATCTGGCGCTCGTCG
AGGAGGGCGTCGTGCGGACA

Product: alternate F1F0 ATPase F0 subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b 1; ATPase subunit I 1; F-type ATPase subunit b 1; F-ATPase subunit b 1 [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLIDWFTVVAQLVNFLILIWLLKRFLYQPVLKALDEREIKIATELEHAASVEAEASREKAEWQKKNDEFAQQRQQMMKQA
TDEATTRRSELLDEARQEYDALHSRLLETLKREEAERQEEAERRVSDEIFSVAGKLLTELADESLESRIIDKFCRKLEAG
GPEIAGQLEGQNGAAKQAIVRSTFPLTPEQREKVSGTITTLLGVETPLSFEQSDKAGCGIELCVDGLCISWHFQAALDAL
KRAADEYRDRETDNGAADAR

Sequences:

>Translated_260_residues
MLIDWFTVVAQLVNFLILIWLLKRFLYQPVLKALDEREIKIATELEHAASVEAEASREKAEWQKKNDEFAQQRQQMMKQA
TDEATTRRSELLDEARQEYDALHSRLLETLKREEAERQEEAERRVSDEIFSVAGKLLTELADESLESRIIDKFCRKLEAG
GPEIAGQLEGQNGAAKQAIVRSTFPLTPEQREKVSGTITTLLGVETPLSFEQSDKAGCGIELCVDGLCISWHFQAALDAL
KRAADEYRDRETDNGAADAR
>Mature_260_residues
MLIDWFTVVAQLVNFLILIWLLKRFLYQPVLKALDEREIKIATELEHAASVEAEASREKAEWQKKNDEFAQQRQQMMKQA
TDEATTRRSELLDEARQEYDALHSRLLETLKREEAERQEEAERRVSDEIFSVAGKLLTELADESLESRIIDKFCRKLEAG
GPEIAGQLEGQNGAAKQAIVRSTFPLTPEQREKVSGTITTLLGVETPLSFEQSDKAGCGIELCVDGLCISWHFQAALDAL
KRAADEYRDRETDNGAADAR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017707
- InterPro:   IPR002146 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 29456; Mature: 29456

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDWFTVVAQLVNFLILIWLLKRFLYQPVLKALDEREIKIATELEHAASVEAEASREKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWQKKNDEFAQQRQQMMKQATDEATTRRSELLDEARQEYDALHSRLLETLKREEAERQEE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERRVSDEIFSVAGKLLTELADESLESRIIDKFCRKLEAGGPEIAGQLEGQNGAAKQAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
RSTFPLTPEQREKVSGTITTLLGVETPLSFEQSDKAGCGIELCVDGLCISWHFQAALDAL
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRAADEYRDRETDNGAADAR
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLIDWFTVVAQLVNFLILIWLLKRFLYQPVLKALDEREIKIATELEHAASVEAEASREKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EWQKKNDEFAQQRQQMMKQATDEATTRRSELLDEARQEYDALHSRLLETLKREEAERQEE
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AERRVSDEIFSVAGKLLTELADESLESRIIDKFCRKLEAGGPEIAGQLEGQNGAAKQAIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
RSTFPLTPEQREKVSGTITTLLGVETPLSFEQSDKAGCGIELCVDGLCISWHFQAALDAL
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KRAADEYRDRETDNGAADAR
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA