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The map label for this gene is phsC [H]

Identifier: 193212711

GI number: 193212711

Start: 1166120

End: 1166725

Strand: Direct

Name: phsC [H]

Synonym: Cpar_1056

Alternate gene names: 193212711

Gene position: 1166120-1166725 (Clockwise)

Preceding gene: 193212710

Following gene: 193212713

Centisome position: 50.94

GC content: 54.13

Gene sequence:

>606_bases
ATGAGAAGGGTCTATCTCTACGCACGCTTCCAACGCTTCTGGCACTGGATGCAGGCCATCATCATCCTCGGACTCCTGTT
TACCGGTCTGGAGGTGCATGGCCTGTTCCTCGGGATCGATTACGAATTGGCCTGCAAGCTGCACAACGCTCTGGCGTTCG
GTCTGCTTGGTTTCATTTTCCTCGCCTTCTTCTGGTATATCACCACTGGTGACTTCCGTCAGTACCTTACCGAAGGCAAC
CTGCTCGAAAAGATCATGATGCAGGTGCGCTACTACATGATCGGGATTTTCAAGAACGAGCCCCACCCGTTCAAGAAAAA
CGAGATTTCGCGTCTCAACCCGTTGCAGCGCATCACCTACCTGCTGCTGACGCTCATCGGTTTACCGATGCAGATCATCG
TCGGGTTTGTCTACTACTACTTCAATGAACTGGTCGCCATGGGTATGCCTGCGAACTGGCTCGGCCCCATCGCCTGGCTG
CACACGCTTCTGGCTTACCTGCTGATCGGGTTCGTGGTGATGCACATTTACATGACCACCACCGGCCACACGCTGACCTC
TAACATCAAGGCCATGGTCACCGGCTGGGAAGAGGTTGAAGAGTAG

Upstream 100 bases:

>100_bases
TTATAGGTCTCATCGTTATTGTGGGATCGGTTGTCGGCGTTTCAGTGCATAGCGTCATGCGGTATATCAGCAACCGGAAT
ATCGGAAAAGGAGGACACGA

Downstream 100 bases:

>100_bases
TTGACAGTTGATAATGAACTAATGAAAAAAGCTGCCCTGATTTTTTTCTGGGGCAGCTTTTTTTTGTGACTGGCCGATCT
GATAAACCGTGAGGCTCTTG

Product: cytochrome B561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MRRVYLYARFQRFWHWMQAIIILGLLFTGLEVHGLFLGIDYELACKLHNALAFGLLGFIFLAFFWYITTGDFRQYLTEGN
LLEKIMMQVRYYMIGIFKNEPHPFKKNEISRLNPLQRITYLLLTLIGLPMQIIVGFVYYYFNELVAMGMPANWLGPIAWL
HTLLAYLLIGFVVMHIYMTTTGHTLTSNIKAMVTGWEEVEE

Sequences:

>Translated_201_residues
MRRVYLYARFQRFWHWMQAIIILGLLFTGLEVHGLFLGIDYELACKLHNALAFGLLGFIFLAFFWYITTGDFRQYLTEGN
LLEKIMMQVRYYMIGIFKNEPHPFKKNEISRLNPLQRITYLLLTLIGLPMQIIVGFVYYYFNELVAMGMPANWLGPIAWL
HTLLAYLLIGFVVMHIYMTTTGHTLTSNIKAMVTGWEEVEE
>Mature_201_residues
MRRVYLYARFQRFWHWMQAIIILGLLFTGLEVHGLFLGIDYELACKLHNALAFGLLGFIFLAFFWYITTGDFRQYLTEGN
LLEKIMMQVRYYMIGIFKNEPHPFKKNEISRLNPLQRITYLLLTLIGLPMQIIVGFVYYYFNELVAMGMPANWLGPIAWL
HTLLAYLLIGFVVMHIYMTTTGHTLTSNIKAMVTGWEEVEE

Specific function: Membrane anchoring protein for the phs system oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]

COG id: COG4117

COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787959, Length=203, Percent_Identity=29.5566502463054, Blast_Score=80, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011577
- InterPro:   IPR016174 [H]

Pfam domain/function: PF01292 Ni_hydr_CYTB [H]

EC number: NA

Molecular weight: Translated: 23624; Mature: 23624

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVYLYARFQRFWHWMQAIIILGLLFTGLEVHGLFLGIDYELACKLHNALAFGLLGFIF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
LAFFWYITTGDFRQYLTEGNLLEKIMMQVRYYMIGIFKNEPHPFKKNEISRLNPLQRITY
HHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHH
LLLTLIGLPMQIIVGFVYYYFNELVAMGMPANWLGPIAWLHTLLAYLLIGFVVMHIYMTT
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGHTLTSNIKAMVTGWEEVEE
CCCHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MRRVYLYARFQRFWHWMQAIIILGLLFTGLEVHGLFLGIDYELACKLHNALAFGLLGFIF
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
LAFFWYITTGDFRQYLTEGNLLEKIMMQVRYYMIGIFKNEPHPFKKNEISRLNPLQRITY
HHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHH
LLLTLIGLPMQIIVGFVYYYFNELVAMGMPANWLGPIAWLHTLLAYLLIGFVVMHIYMTT
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TGHTLTSNIKAMVTGWEEVEE
CCCHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7751291; 7737516; 11677609 [H]