| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212688
Identifier: 193212688
GI number: 193212688
Start: 1142848
End: 1143210
Strand: Direct
Name: 193212688
Synonym: Cpar_1033
Alternate gene names: NA
Gene position: 1142848-1143210 (Clockwise)
Preceding gene: 193212687
Following gene: 193212691
Centisome position: 49.92
GC content: 50.14
Gene sequence:
>363_bases ATGCCAACACTTTATTTGATCGTCGCGCTTGTCATTGCGGTTATTGCGGTGCTGTTTGCGTTGCAAAACTCGATGCTTGT CACCATCTCCTTTTTAAGCTGGGAGATTTCCGGATCGCTTTCACTGGTTTTGTTAGCCACCCTCGCTATCGGCGTGCTGA TTGGTTTGCTCGTGCTTGCTCCTTCAGCGCTCAAAAAGACCTTCAAGGCTTCGAGTCAGCGGAAACGAATCAACGCGCTC GAACATGAAGTGAGTGAGCACAAAGCCAAAGTTGCCGAACTTCAGAGACCTGTCCCGACGCCCTCATTGCCCGAAACACA GCAGTCATCGCAATCATCGAAAGAAGAAGGGGATTGGGACTAA
Upstream 100 bases:
>100_bases ATGAAAAAAATCGGTATCGTAGTATTGCATTCAACGCACAGAGCTGAGCAGGCAGGGTTTTAATCAGCAGAGGTAATTCA AACACCAACTTTTGCAGAAA
Downstream 100 bases:
>100_bases CGTAATGATGAAAAAGTCTCAATGACTCCTTGTGGTGGTCCGGAATTGAGCGGATGGAGATTTTTAAAAACAGGGGCGGG AATAAATAAAAAATCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MPTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLAPSALKKTFKASSQRKRINAL EHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD
Sequences:
>Translated_120_residues MPTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLAPSALKKTFKASSQRKRINAL EHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD >Mature_119_residues PTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLAPSALKKTFKASSQRKRINALE HEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12993; Mature: 12862
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLA CCHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC PSALKKTFKASSQRKRINALEHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC >Mature Secondary Structure PTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLA CHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC PSALKKTFKASSQRKRINALEHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA