Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is 193212688

Identifier: 193212688

GI number: 193212688

Start: 1142848

End: 1143210

Strand: Direct

Name: 193212688

Synonym: Cpar_1033

Alternate gene names: NA

Gene position: 1142848-1143210 (Clockwise)

Preceding gene: 193212687

Following gene: 193212691

Centisome position: 49.92

GC content: 50.14

Gene sequence:

>363_bases
ATGCCAACACTTTATTTGATCGTCGCGCTTGTCATTGCGGTTATTGCGGTGCTGTTTGCGTTGCAAAACTCGATGCTTGT
CACCATCTCCTTTTTAAGCTGGGAGATTTCCGGATCGCTTTCACTGGTTTTGTTAGCCACCCTCGCTATCGGCGTGCTGA
TTGGTTTGCTCGTGCTTGCTCCTTCAGCGCTCAAAAAGACCTTCAAGGCTTCGAGTCAGCGGAAACGAATCAACGCGCTC
GAACATGAAGTGAGTGAGCACAAAGCCAAAGTTGCCGAACTTCAGAGACCTGTCCCGACGCCCTCATTGCCCGAAACACA
GCAGTCATCGCAATCATCGAAAGAAGAAGGGGATTGGGACTAA

Upstream 100 bases:

>100_bases
ATGAAAAAAATCGGTATCGTAGTATTGCATTCAACGCACAGAGCTGAGCAGGCAGGGTTTTAATCAGCAGAGGTAATTCA
AACACCAACTTTTGCAGAAA

Downstream 100 bases:

>100_bases
CGTAATGATGAAAAAGTCTCAATGACTCCTTGTGGTGGTCCGGAATTGAGCGGATGGAGATTTTTAAAAACAGGGGCGGG
AATAAATAAAAAATCGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MPTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLAPSALKKTFKASSQRKRINAL
EHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD

Sequences:

>Translated_120_residues
MPTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLAPSALKKTFKASSQRKRINAL
EHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD
>Mature_119_residues
PTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLAPSALKKTFKASSQRKRINALE
HEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12993; Mature: 12862

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLA
CCHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PSALKKTFKASSQRKRINALEHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure 
PTLYLIVALVIAVIAVLFALQNSMLVTISFLSWEISGSLSLVLLATLAIGVLIGLLVLA
CHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PSALKKTFKASSQRKRINALEHEVSEHKAKVAELQRPVPTPSLPETQQSSQSSKEEGDWD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA