| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212647
Identifier: 193212647
GI number: 193212647
Start: 1097051
End: 1097992
Strand: Direct
Name: 193212647
Synonym: Cpar_0992
Alternate gene names: NA
Gene position: 1097051-1097992 (Clockwise)
Preceding gene: 193212639
Following gene: 193212648
Centisome position: 47.92
GC content: 58.39
Gene sequence:
>942_bases ATGAATCACCGGTTCCGTAACGTTGTGATCATCCTCATCCTGGCCGCAGGCATTCTGGTGCCGTTGTGGTTATGGATGCG TCCTCCCGCTTCCGAGCAACAGGTGAGCTCGGCAGTGTCCGGTCCGACGCCGATCAGCGGGAGCCTCATCGTGGCTGTTG ACCACACCCTGATGCCGGTAGCTACTCTTCAGTCCCGAGCTTTTTCCGATCAATATGGCCAGGCGTCGATTTCCATCGAA GGCTCCAGTTCACGGCCCGTGCTGCAATTCCTGCGCCGTGAGGCCGGGGCTGCTCTGATTCAGGGAGCGCTTTCTGCCGA GGAGGATTCGGTGATGACTTCATTGAAACGTCCGGTCAAACAGCAGTCGGTGGCTCGTAACGCTCTGGTGCTGGTGGTTA ATAAGGCCAATCCTGTCCGTACTTTTTCCCTTGAACAGTTGCGCCAAATCTTTTCCGGCAAGATGTTGGACTGGAAAGCT GTCAGCAGTGTATCCGGCCCGATCGTCCCCTGTGTGAACGGCAGCGATCTGCGGTCGAGGCTGGTGCTTTCGTCGCTGCT TTTCGGCAAGCAGGATGAACTGAAAGCTTCCGCCGAACCAGGCCTTTCCGAGCTGCTTGAGCGGGTGAGCAGTGACCGCA ACGCCTTGGCAGTCATCACTATGCCAGCCTGGGCAGAAACCTTGCGCAGCGGCAGATACGGCCAAAGTCTTCGGGCGGTG CCGCTCATTGGTGACGATGGGGGAGCGCCGGTAAGCGCTTCGCCTGCAACGGTGTACCGTGGAGAGTATCCGCTCTCGAC GGTCATCCTCTATCTGTACGACCCGTACAATCCCCTTGCCACCGGTTTTGGCGCATGGCTCGCCAAGGAGGGGCAGAAGC TTTTCGAGCGCGGCGACATGGCTCCATACCAGCAGCTCGTGCGCACGATCATTATCAAATGA
Upstream 100 bases:
>100_bases CAATGAGTTGCAGGGGTTGCTGTTAATCCGGATTTTCAGCGCCTGATAGTACCTTTCTGCTGTTTTTTGCCTACATTTCA ACTATAAATCTACTATAGCC
Downstream 100 bases:
>100_bases ATGGATGAAACAGGAATACGAAACTTCCGGCAGAGGCTTGCTCCGACTGCCCATTATCACTGGTATTGCAGCGCTGCTGC TGGCTTTCGGCGGCACGGCA
Product: phosphate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNHRFRNVVIILILAAGILVPLWLWMRPPASEQQVSSAVSGPTPISGSLIVAVDHTLMPVATLQSRAFSDQYGQASISIE GSSSRPVLQFLRREAGAALIQGALSAEEDSVMTSLKRPVKQQSVARNALVLVVNKANPVRTFSLEQLRQIFSGKMLDWKA VSSVSGPIVPCVNGSDLRSRLVLSSLLFGKQDELKASAEPGLSELLERVSSDRNALAVITMPAWAETLRSGRYGQSLRAV PLIGDDGGAPVSASPATVYRGEYPLSTVILYLYDPYNPLATGFGAWLAKEGQKLFERGDMAPYQQLVRTIIIK
Sequences:
>Translated_313_residues MNHRFRNVVIILILAAGILVPLWLWMRPPASEQQVSSAVSGPTPISGSLIVAVDHTLMPVATLQSRAFSDQYGQASISIE GSSSRPVLQFLRREAGAALIQGALSAEEDSVMTSLKRPVKQQSVARNALVLVVNKANPVRTFSLEQLRQIFSGKMLDWKA VSSVSGPIVPCVNGSDLRSRLVLSSLLFGKQDELKASAEPGLSELLERVSSDRNALAVITMPAWAETLRSGRYGQSLRAV PLIGDDGGAPVSASPATVYRGEYPLSTVILYLYDPYNPLATGFGAWLAKEGQKLFERGDMAPYQQLVRTIIIK >Mature_313_residues MNHRFRNVVIILILAAGILVPLWLWMRPPASEQQVSSAVSGPTPISGSLIVAVDHTLMPVATLQSRAFSDQYGQASISIE GSSSRPVLQFLRREAGAALIQGALSAEEDSVMTSLKRPVKQQSVARNALVLVVNKANPVRTFSLEQLRQIFSGKMLDWKA VSSVSGPIVPCVNGSDLRSRLVLSSLLFGKQDELKASAEPGLSELLERVSSDRNALAVITMPAWAETLRSGRYGQSLRAV PLIGDDGGAPVSASPATVYRGEYPLSTVILYLYDPYNPLATGFGAWLAKEGQKLFERGDMAPYQQLVRTIIIK
Specific function: Unknown
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33887; Mature: 33887
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHRFRNVVIILILAAGILVPLWLWMRPPASEQQVSSAVSGPTPISGSLIVAVDHTLMPV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHH ATLQSRAFSDQYGQASISIEGSSSRPVLQFLRREAGAALIQGALSAEEDSVMTSLKRPVK HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QQSVARNALVLVVNKANPVRTFSLEQLRQIFSGKMLDWKAVSSVSGPIVPCVNGSDLRSR HHHHHCCEEEEEEECCCCCEECCHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCHHHHHH LVLSSLLFGKQDELKASAEPGLSELLERVSSDRNALAVITMPAWAETLRSGRYGQSLRAV HHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCEEE PLIGDDGGAPVSASPATVYRGEYPLSTVILYLYDPYNPLATGFGAWLAKEGQKLFERGDM EEEECCCCCCCCCCCCEEEECCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC APYQQLVRTIIIK CHHHHHHHHHHCC >Mature Secondary Structure MNHRFRNVVIILILAAGILVPLWLWMRPPASEQQVSSAVSGPTPISGSLIVAVDHTLMPV CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCHHHH ATLQSRAFSDQYGQASISIEGSSSRPVLQFLRREAGAALIQGALSAEEDSVMTSLKRPVK HHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QQSVARNALVLVVNKANPVRTFSLEQLRQIFSGKMLDWKAVSSVSGPIVPCVNGSDLRSR HHHHHCCEEEEEEECCCCCEECCHHHHHHHHCCCCCCHHHHHCCCCCEEECCCCHHHHHH LVLSSLLFGKQDELKASAEPGLSELLERVSSDRNALAVITMPAWAETLRSGRYGQSLRAV HHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCEEE PLIGDDGGAPVSASPATVYRGEYPLSTVILYLYDPYNPLATGFGAWLAKEGQKLFERGDM EEEECCCCCCCCCCCCEEEECCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC APYQQLVRTIIIK CHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA