Click here to switch to the map view.

The map label for this gene is rpiB [H]

Identifier: 193212635

GI number: 193212635

Start: 1082936

End: 1083370

Strand: Direct

Name: rpiB [H]

Synonym: Cpar_0980

Alternate gene names: 193212635

Gene position: 1082936-1083370 (Clockwise)

Preceding gene: 193212634

Following gene: 193212636

Centisome position: 47.31

GC content: 58.16

Gene sequence:

>435_bases
ATGAACATTGCAGTTGGAAGCGACCACGCAGGCGTGGAAATGAAGAAAAGCGTCATCGCCTGGCTCGAAAAGAACGGCCA
CACCGCTGAGGATATGGGGCCATATACCGAAGAGTCGGTCGATTACCCCGATTTCGCCCATAAGGTGTGCAGCGCAGTTC
TGGAAGGCAAAGCCGATCAGGGGATTCTGATGTGTGGCACCGGTATCGGCATGTCCATCGCGGCCAACAAGGTGAAGGGC
ATTCGCGCCGGGCTGGCGTGCGGCCCTGAATTCGCGGCACTTGCCCGTCAGCACAACAACGCCAACGTGCTCTGCTTTGC
GGCGCGCTTCAACGATGTGCCCACTGCCGAGAAGATTCTCGAAAGCTGGTTTGCTTCGGAGTTCGAGGGAGGCCGTCACC
AGCGCCGTGTCGATAAACTTGAAGCCGGTAGCTGA

Upstream 100 bases:

>100_bases
GAACGAAAAAGGAGGCTCGCAGCGTGACCGATAGCCAGCGGCTGTTCATGCGGCGTGCGCTCCGGAGAAAGAAAACCCAC
AAAACCAAAGTTAACGGATT

Downstream 100 bases:

>100_bases
ATGAGCGTCACCTTCTCATATCTGGCCGATGCGGTCTCTACAGCGTTCACCATTGGTGATCCGCTGGAAGAGGTGACCAA
AACGCTTGTCGCCAAAGAGC

Product: sugar-phosphate isomerase, RpiB/LacA/LacB family

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNIAVGSDHAGVEMKKSVIAWLEKNGHTAEDMGPYTEESVDYPDFAHKVCSAVLEGKADQGILMCGTGIGMSIAANKVKG
IRAGLACGPEFAALARQHNNANVLCFAARFNDVPTAEKILESWFASEFEGGRHQRRVDKLEAGS

Sequences:

>Translated_144_residues
MNIAVGSDHAGVEMKKSVIAWLEKNGHTAEDMGPYTEESVDYPDFAHKVCSAVLEGKADQGILMCGTGIGMSIAANKVKG
IRAGLACGPEFAALARQHNNANVLCFAARFNDVPTAEKILESWFASEFEGGRHQRRVDKLEAGS
>Mature_144_residues
MNIAVGSDHAGVEMKKSVIAWLEKNGHTAEDMGPYTEESVDYPDFAHKVCSAVLEGKADQGILMCGTGIGMSIAANKVKG
IRAGLACGPEFAALARQHNNANVLCFAARFNDVPTAEKILESWFASEFEGGRHQRRVDKLEAGS

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=141, Percent_Identity=45.3900709219858, Blast_Score=133, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15439; Mature: 15439

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAVGSDHAGVEMKKSVIAWLEKNGHTAEDMGPYTEESVDYPDFAHKVCSAVLEGKADQ
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
GILMCGTGIGMSIAANKVKGIRAGLACGPEFAALARQHNNANVLCFAARFNDVPTAEKIL
CEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH
ESWFASEFEGGRHQRRVDKLEAGS
HHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNIAVGSDHAGVEMKKSVIAWLEKNGHTAEDMGPYTEESVDYPDFAHKVCSAVLEGKADQ
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
GILMCGTGIGMSIAANKVKGIRAGLACGPEFAALARQHNNANVLCFAARFNDVPTAEKIL
CEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHH
ESWFASEFEGGRHQRRVDKLEAGS
HHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]