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The map label for this gene is yqgN [H]

Identifier: 193212633

GI number: 193212633

Start: 1080211

End: 1080801

Strand: Direct

Name: yqgN [H]

Synonym: Cpar_0978

Alternate gene names: 193212633

Gene position: 1080211-1080801 (Clockwise)

Preceding gene: 193212627

Following gene: 193212634

Centisome position: 47.19

GC content: 56.01

Gene sequence:

>591_bases
ATGATGAACAGCAAGGTGGACATCCGCAGGGAGCTGCTTTTGAAGCGCAGGGCTCTGAGTCGGGAGGCATGGCTTGAAAA
AAGCGGAACAATCCGGCAGTGGCTCATGACCATGCCGGAGCTGCTCGGTGCAGGAAAGGTTCACTGCTACGTTTCGATGG
AACGTGACCGGGAGGTAGGGACGCTCGAAGTGCTCGAATGGCTTTGCAGCGAACGGAAAGCGGTGTTCATGCCTTATATT
GAGCGTGACCGGATGCTTGCAGTGCGCTATTTGCCAAGCCAGCGATTCGAAGCTGCCAAAATAGGCCCTCCGCTTCCTGT
GCCGCTTGAACTTACTGACGAGCGGTGTTTCGATGCTGTGATTGTGCCGCTTGTCGGTTTCGATCGTCAGGGGGGACGCA
TTGGCTTTGGAAAAGGGTGGTACGACCGATTTTTCGAGGAGTTGTCAACCCGTGGCATCAGCCCGGTCAGAGTCGGCCTG
GCGTTCGATTGCCAGGAGGTGCTGGCGGTTCCTTTCGACCCATGGGACCAGCGGCTCGACTATGTGGTAACTGAAACCGG
GATCATCAAGTGTTTGAACAGCAGGTCATGA

Upstream 100 bases:

>100_bases
ATCTTAACATTTCTAATCCAACGGGCTGATCGGAGGGTTTTGCCGGACGTTGGCGAAAGGGATCAACAGCCGTCATGGCT
TGTTTTTTTGCAGGTTAAAG

Downstream 100 bases:

>100_bases
AGAGCGGACAAAACCGAACCATGGTTGCGGCGCCGGAAACGGACCTGCGCGATCCGTCGCTCTACGTGAACCGGGAGCTG
AGCTGGATCGATTTCAACCA

Product: 5-formyltetrahydrofolate cyclo-ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MMNSKVDIRRELLLKRRALSREAWLEKSGTIRQWLMTMPELLGAGKVHCYVSMERDREVGTLEVLEWLCSERKAVFMPYI
ERDRMLAVRYLPSQRFEAAKIGPPLPVPLELTDERCFDAVIVPLVGFDRQGGRIGFGKGWYDRFFEELSTRGISPVRVGL
AFDCQEVLAVPFDPWDQRLDYVVTETGIIKCLNSRS

Sequences:

>Translated_196_residues
MMNSKVDIRRELLLKRRALSREAWLEKSGTIRQWLMTMPELLGAGKVHCYVSMERDREVGTLEVLEWLCSERKAVFMPYI
ERDRMLAVRYLPSQRFEAAKIGPPLPVPLELTDERCFDAVIVPLVGFDRQGGRIGFGKGWYDRFFEELSTRGISPVRVGL
AFDCQEVLAVPFDPWDQRLDYVVTETGIIKCLNSRS
>Mature_196_residues
MMNSKVDIRRELLLKRRALSREAWLEKSGTIRQWLMTMPELLGAGKVHCYVSMERDREVGTLEVLEWLCSERKAVFMPYI
ERDRMLAVRYLPSQRFEAAKIGPPLPVPLELTDERCFDAVIVPLVGFDRQGGRIGFGKGWYDRFFEELSTRGISPVRVGL
AFDCQEVLAVPFDPWDQRLDYVVTETGIIKCLNSRS

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Homo sapiens, GI5453746, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1789278, Length=180, Percent_Identity=32.2222222222222, Blast_Score=74, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6321031, Length=209, Percent_Identity=27.7511961722488, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22646; Mature: 22646

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNSKVDIRRELLLKRRALSREAWLEKSGTIRQWLMTMPELLGAGKVHCYVSMERDREVG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
TLEVLEWLCSERKAVFMPYIERDRMLAVRYLPSQRFEAAKIGPPLPVPLELTDERCFDAV
HHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCEECCHHHHHHH
IVPLVGFDRQGGRIGFGKGWYDRFFEELSTRGISPVRVGLAFDCQEVLAVPFDPWDQRLD
HHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCCHHHHHC
YVVTETGIIKCLNSRS
CCEEHHHHHHHHCCCC
>Mature Secondary Structure
MMNSKVDIRRELLLKRRALSREAWLEKSGTIRQWLMTMPELLGAGKVHCYVSMERDREVG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCC
TLEVLEWLCSERKAVFMPYIERDRMLAVRYLPSQRFEAAKIGPPLPVPLELTDERCFDAV
HHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCEECCHHHHHHH
IVPLVGFDRQGGRIGFGKGWYDRFFEELSTRGISPVRVGLAFDCQEVLAVPFDPWDQRLD
HHHHHCCCCCCCEECCCCCHHHHHHHHHHHCCCCCEEEEEEECHHHHHCCCCCCHHHHHC
YVVTETGIIKCLNSRS
CCEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]