| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212542
Identifier: 193212542
GI number: 193212542
Start: 964010
End: 964414
Strand: Direct
Name: 193212542
Synonym: Cpar_0882
Alternate gene names: NA
Gene position: 964010-964414 (Clockwise)
Preceding gene: 193212541
Following gene: 193212545
Centisome position: 42.11
GC content: 49.38
Gene sequence:
>405_bases ATGTGCCTTGCTGTCTATCTCGCCAGTAATAAGCCAATTCCGCTTGTTGAGTGGAATGATGCGGCTCCTCGCTTCAATGT GGTGCCGATCATTGACGATGAACTGCTCGTGAAAAAGCAGTTTCGGAACCAGAATGTAGTCTATGTGGGCTCTCACCAGG GGTGCGGCTGCGGTTTTTTCAAAGAAGGCGCATCTGGCGAAGAGTTATTGCTGGTACAAGCCAATTACGATTCACTCGTG CGCTATCTGGGCGAACTGATGAGCGATGGTGCGAACATCGAGATCTTTTGCTGCTGGGAAGGCGATCAAGGTTCGGAGCC TGAATTCAAAGAGCGGTTGTCTTTGGCAGGGTTAGGTTCTGAGAGCTTCGAGTTTAAGGAGAATGCGTACTATGAAATCG TATGA
Upstream 100 bases:
>100_bases CTTGGCGGCCTACTGGCGCAAGGGTTATTTTGCCCGCCTTTTTAGCAAGCCATGATCGTGGTCTAAATAACGTCGGTTAT GCCGAGCATTATGCTTGAAA
Downstream 100 bases:
>100_bases CAAGGTGCTCAATCAGCTTGTAAGCTTATTTCGAACTGAAAGCCTTCTCTCTCTTGGCGTTACATCCTAACAGCTGAACG TACGAGAAAATCTGAGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MCLAVYLASNKPIPLVEWNDAAPRFNVVPIIDDELLVKKQFRNQNVVYVGSHQGCGCGFFKEGASGEELLLVQANYDSLV RYLGELMSDGANIEIFCCWEGDQGSEPEFKERLSLAGLGSESFEFKENAYYEIV
Sequences:
>Translated_134_residues MCLAVYLASNKPIPLVEWNDAAPRFNVVPIIDDELLVKKQFRNQNVVYVGSHQGCGCGFFKEGASGEELLLVQANYDSLV RYLGELMSDGANIEIFCCWEGDQGSEPEFKERLSLAGLGSESFEFKENAYYEIV >Mature_134_residues MCLAVYLASNKPIPLVEWNDAAPRFNVVPIIDDELLVKKQFRNQNVVYVGSHQGCGCGFFKEGASGEELLLVQANYDSLV RYLGELMSDGANIEIFCCWEGDQGSEPEFKERLSLAGLGSESFEFKENAYYEIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14984; Mature: 14984
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLAVYLASNKPIPLVEWNDAAPRFNVVPIIDDELLVKKQFRNQNVVYVGSHQGCGCGFF CEEEEEEECCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCC KEGASGEELLLVQANYDSLVRYLGELMSDGANIEIFCCWEGDQGSEPEFKERLSLAGLGS CCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHEECCCCC ESFEFKENAYYEIV CCCEECCCEEEEEC >Mature Secondary Structure MCLAVYLASNKPIPLVEWNDAAPRFNVVPIIDDELLVKKQFRNQNVVYVGSHQGCGCGFF CEEEEEEECCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHCCCCEEEEECCCCCCCCCC KEGASGEELLLVQANYDSLVRYLGELMSDGANIEIFCCWEGDQGSEPEFKERLSLAGLGS CCCCCCCEEEEEEECHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHEECCCCC ESFEFKENAYYEIV CCCEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA