| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193212505
Identifier: 193212505
GI number: 193212505
Start: 917012
End: 918085
Strand: Direct
Name: 193212505
Synonym: Cpar_0842
Alternate gene names: NA
Gene position: 917012-918085 (Clockwise)
Preceding gene: 193212504
Following gene: 193212509
Centisome position: 40.06
GC content: 58.29
Gene sequence:
>1074_bases ATGACCGAAGCTTTGGGCGTTGTTTTCACTATTATTTTGGCCTCCTGGTCGGTACTGCTCGACGCTGCACCATGGGTGCT GTTCGGATTTTTGGTTGCTGGTCTCGTCAAGGCGTTTGTGCCCGAAGAGTTGGTGCAGGCTCATCTTGGCGGCGGCTTGT GGAGTATCGTCAAGGCTTCGGCGATCGGCGTGCCGATTCCGTTGTGCAGTTGCGGGGTGATTCCTGCGGCGGCTGGCCTC AAAAAACAGGGCGCGGGGAAGGGGGCGGTGGCCTCGTTTCTTGTTTCCACCCCGGAGACCGGCATCGATTCGATTGCGAT TACCTACGCCTTGCTCGATCCCCTGATGACCATTTTCAGACCCATCGCGGCGTTCGTGACGGCCATCGCGACCGGTGTCT CTGTCTCGTTTACCGGCAAGGCTGAGCCAGCAGCACCTGCAACGGAGTCTGAGTGCGGTACGCAGGATTCTGGCTGTTCA TGCGGTTGTGGTCACAAGAAAGTCGAGAAGCCGGGCGTCGTTCAGAAAATAAAATCGGGCCTTTCCTTTTCTTTCGGCGA ATTGCTTGGCGATGTTGGAGGCTGGCTGCTGGGCGGCGTGCTGCTTGCGGGCCTGATTTCGGTTTTCGTTTCCGGGGAGT TTGTCGAGCGTTACCTGTCGAACGATGTTGTCGCCATGATTATGATGCTGGCGATTTCGGTGCCGATGTACGTCTGCGCC ACCTCGTCAACGCCCATTGTCGCAGCGCTTGCGCTCAAAGGCATTTCGCCCGGCGCGGCGCTTGTGTTCCTGCTTGCCGG TCCGGCGACCAACGCCGCCTCGTTGCCGGTGATCTCGAAACTGCTCGGCAAAAAGGGCACGGTGGTTTATCTGGCGGTTA TCATCGTGATGTCGCTCCTGTTCGGCATCCTTGTCAATCACCTCTACGGCTGGCTTGGCTTCGATCCGAAGCATTGGGCG ACCGGCGCTGCGCGCGAGGAAAGTGGCGTACTGGCCATTTCGTCAGCCATTCTGCTCATTTTGCTGATACTGCGCACTCG CATCTCTTCCTGGCGAACGGCTCGTCAGCGTTGA
Upstream 100 bases:
>100_bases GTATCTGTCCGTAGAGGCTTCAGGCGGTTCACATCCCATCTTTTTTTATGGATGAGCGCATGAACATCCGAAAATATTCA GGTTGCAGGCGAGGTGCAGT
Downstream 100 bases:
>100_bases TCTTACGCTTCTTTTTTGCCGACCGGCGCGAGGTAGATCGTGAACTCCTCTTTGCCGTCCACGTCGATTAATTCGTCCAT TCCATCCTGATGATATGCCG
Product: permease
Products: NA
Alternate protein names: Permease Family
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTEALGVVFTIILASWSVLLDAAPWVLFGFLVAGLVKAFVPEELVQAHLGGGLWSIVKASAIGVPIPLCSCGVIPAAAGL KKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFRPIAAFVTAIATGVSVSFTGKAEPAAPATESECGTQDSGCS CGCGHKKVEKPGVVQKIKSGLSFSFGELLGDVGGWLLGGVLLAGLISVFVSGEFVERYLSNDVVAMIMMLAISVPMYVCA TSSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVVYLAVIIVMSLLFGILVNHLYGWLGFDPKHWA TGAAREESGVLAISSAILLILLILRTRISSWRTARQR
Sequences:
>Translated_357_residues MTEALGVVFTIILASWSVLLDAAPWVLFGFLVAGLVKAFVPEELVQAHLGGGLWSIVKASAIGVPIPLCSCGVIPAAAGL KKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFRPIAAFVTAIATGVSVSFTGKAEPAAPATESECGTQDSGCS CGCGHKKVEKPGVVQKIKSGLSFSFGELLGDVGGWLLGGVLLAGLISVFVSGEFVERYLSNDVVAMIMMLAISVPMYVCA TSSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVVYLAVIIVMSLLFGILVNHLYGWLGFDPKHWA TGAAREESGVLAISSAILLILLILRTRISSWRTARQR >Mature_356_residues TEALGVVFTIILASWSVLLDAAPWVLFGFLVAGLVKAFVPEELVQAHLGGGLWSIVKASAIGVPIPLCSCGVIPAAAGLK KQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFRPIAAFVTAIATGVSVSFTGKAEPAAPATESECGTQDSGCSC GCGHKKVEKPGVVQKIKSGLSFSFGELLGDVGGWLLGGVLLAGLISVFVSGEFVERYLSNDVVAMIMMLAISVPMYVCAT SSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVVYLAVIIVMSLLFGILVNHLYGWLGFDPKHWAT GAAREESGVLAISSAILLILLILRTRISSWRTARQR
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36824; Mature: 36693
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEALGVVFTIILASWSVLLDAAPWVLFGFLVAGLVKAFVPEELVQAHLGGGLWSIVKAS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHH AIGVPIPLCSCGVIPAAAGLKKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFR HCCCCCCHHHCCCHHHHCCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH PIAAFVTAIATGVSVSFTGKAEPAAPATESECGTQDSGCSCGCGHKKVEKPGVVQKIKSG HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC LSFSFGELLGDVGGWLLGGVLLAGLISVFVSGEFVERYLSNDVVAMIMMLAISVPMYVCA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEE TSSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVVYLAVIIVMSLL CCCCHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH FGILVNHLYGWLGFDPKHWATGAAREESGVLAISSAILLILLILRTRISSWRTARQR HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEALGVVFTIILASWSVLLDAAPWVLFGFLVAGLVKAFVPEELVQAHLGGGLWSIVKAS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHH AIGVPIPLCSCGVIPAAAGLKKQGAGKGAVASFLVSTPETGIDSIAITYALLDPLMTIFR HCCCCCCHHHCCCHHHHCCCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH PIAAFVTAIATGVSVSFTGKAEPAAPATESECGTQDSGCSCGCGHKKVEKPGVVQKIKSG HHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC LSFSFGELLGDVGGWLLGGVLLAGLISVFVSGEFVERYLSNDVVAMIMMLAISVPMYVCA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEE TSSTPIVAALALKGISPGAALVFLLAGPATNAASLPVISKLLGKKGTVVYLAVIIVMSLL CCCCHHHHHHHHHCCCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH FGILVNHLYGWLGFDPKHWATGAAREESGVLAISSAILLILLILRTRISSWRTARQR HHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA