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The map label for this gene is recR

Identifier: 193212498

GI number: 193212498

Start: 907614

End: 908228

Strand: Direct

Name: recR

Synonym: Cpar_0835

Alternate gene names: 193212498

Gene position: 907614-908228 (Clockwise)

Preceding gene: 193212497

Following gene: 193212499

Centisome position: 39.65

GC content: 58.86

Gene sequence:

>615_bases
ATGCGTTACAGCTCAGGAGCCGTCGAGGCGCTCATCGAAGAGTTTGCCAAACTGCCCGGTATTGGCCGGAAGACCGCACA
GCGCCTGACGATGCATGTGCTGCAGGAGAGGCGCGGAGAGGTTGAAAAACTTGCGGCTGCCCTGATCGACGTCAAAGAGA
AGGTGGTGCGCTGCTCGATCTGCCAGAACATCACCGATCTCGGCACCGACCCCTGCCTGCTCTGCACCTCAACAGGTCGT
GACCGCTCGGTCATCTGTGTTGTCGAATCGCCCACAGAAGTGCTCGCCTTTGAAAAAACAGGTCATTACAAAGGACTGTA
CCACGTGCTGCACGGGGTGATTTCGCCGCTCGACGGCGTTGGTCCCGACGACATCAAAGTGCGTGAACTGCTGGCTCGAA
TCAGCCCTGATTCGGAGGGCGGGGTTCGTGAGGTGGTACTGGCGCTCAATCCCACGGTCGAGGGGGAAACGACCTCGCTC
TATATCAGCAAACTGCTCAAACCACTCGGCATCAACGTCACCAGAATCGCCAGAGGAATTCCGGTGGGTGCCGAGCTTGA
ATTCATCGACGAAGCGACCCTTTCGCGGGCGATGGATGGGCGGTCGGCCGTCTGA

Upstream 100 bases:

>100_bases
GCAGCTCGCGCAGAACGAGATTCAGAAGGCGGCTGGCGGTATGATCAACCCGGCCGATCTGCTGAAACAGTTCGGCGGTC
AGGGATAAGCGGGTTATTTC

Downstream 100 bases:

>100_bases
GAATCTCGATGGCTACTTAAAGAAAAAGCTATTCAGTTAATTTGAGTGATGAACGGAAAGAATAAAAAGGTACTGATTCT
CGGCGGAGGTCTTGCCGGCC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSICQNITDLGTDPCLLCTSTGR
DRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVGPDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSL
YISKLLKPLGINVTRIARGIPVGAELEFIDEATLSRAMDGRSAV

Sequences:

>Translated_204_residues
MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSICQNITDLGTDPCLLCTSTGR
DRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVGPDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSL
YISKLLKPLGINVTRIARGIPVGAELEFIDEATLSRAMDGRSAV
>Mature_204_residues
MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSICQNITDLGTDPCLLCTSTGR
DRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGVGPDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSL
YISKLLKPLGINVTRIARGIPVGAELEFIDEATLSRAMDGRSAV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=195, Percent_Identity=42.5641025641026, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_CHLP8 (B3QMU8)

Other databases:

- EMBL:   CP001099
- RefSeq:   YP_001998451.1
- GeneID:   6419764
- GenomeReviews:   CP001099_GR
- KEGG:   cpc:Cpar_0835
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF00633 HHH; PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22079; Mature: 22079

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSI
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
CQNITDLGTDPCLLCTSTGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGV
HHHHHHCCCCCEEEEECCCCCCEEEEEEECCHHHEEECCCCCHHHHHHHHHHHHHHCCCC
GPDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGI
CCCCHHHHHHHHHCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCC
PVGAELEFIDEATLSRAMDGRSAV
CCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRYSSGAVEALIEEFAKLPGIGRKTAQRLTMHVLQERRGEVEKLAAALIDVKEKVVRCSI
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
CQNITDLGTDPCLLCTSTGRDRSVICVVESPTEVLAFEKTGHYKGLYHVLHGVISPLDGV
HHHHHHCCCCCEEEEECCCCCCEEEEEEECCHHHEEECCCCCHHHHHHHHHHHHHHCCCC
GPDDIKVRELLARISPDSEGGVREVVLALNPTVEGETTSLYISKLLKPLGINVTRIARGI
CCCCHHHHHHHHHCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHCC
PVGAELEFIDEATLSRAMDGRSAV
CCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA